Perca flavescens (yellow perch): 114558541
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Entry
114558541 CDS
T07494
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114558541 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114558541 (exosc10)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
114558541 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
DUF4446
Motif
Other DBs
NCBI-GeneID:
114558541
NCBI-ProteinID:
XP_028438402
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All DBs
Position
7:complement(22269641..22284776)
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AA seq
897 aa
AA seq
DB search
LWILQRVKTPQTAAFKKPIQTPTTRKKKHLCPGFKDADAFVKYGLGAVLSATKASAGLPQ
TGDEYDFYRSFPGFQEFCESQGDKLLHCMSQIMQHHGCRSRMRDRNKLTGLEERFDLVVD
SNDVILERVGILLDEADGVNRNQQPVMPAEFQPPKIVVSSWNRMGSSSGSRSETFRLLQA
KNIARPQMKFKEKVDNSNTPFIPKIFIKPNAVKPLPSYFTNKQIRKERPEDLDVPAALAD
FIHQQRTQEHVEDMFAHPYQYELDHLTIPESVLSKPEPQMYKPLTETKCSFIDTLEDLVA
LNEKLCKLSEFAVDLEHHSYRSFLGLTCLIQISSREEDFLIDAIELRSELYILNEAFTDP
AIVKVFHGADSDIEWLQRDFGLYVVNLFDTHQASRALNLARHSLDQLLKHFCNVNSEKRY
QLADWRIRPLPDEMVQYARMDTHYLLYIYDCVRVQLLDFKHGQPGLLQSVWNKSKDISLK
KYTKPIFTEESYLELQRKQKRSFNTQQLTAFRLLFAWRDKLARQEDESTGFTLPTHMMNK
ISEELPKEPQGIIACCNPVPPLVRQQVNELHLLVQQAREMPLLKAEIAAEKKKGLTPIKK
PEVTMFGPHDTSRVSESDLQHCSPDELPVKQGVLFAEDEPKMDVDVQKTSGLMAAAKITQ
FEELETQNDHESLSVAQMKARRIIECFENPFRMYLPSSDVHISKNAKFDPSSKIFEISKR
WKLLSMEQQQKELEAKKEANRKAKEEAKEHTKKVAEERNQAKQSYQESLQNVATVRQQAA
ESAKGGGKKRERVASEVGESTPKPSKKQMKSAEKPQKTEPPPQDSFKPFDYSQSNLKVFA
GTKSKDNTQFDPNQQAHGFKKKKTPRGQKSNSGAGSRSMSYMAGKSDRGFRHNWPKR
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
ctatggattcttcaaagagtaaagactccacaaacagcggccttcaagaaaccaattcag
acaccaacgacgagaaaaaaaaaacacttgtgtcccggctttaaagacgcggatgctttt
gttaaatatggattgggtgctgtattatccgccaccaaagcatccgccggcttgcctcaa
actggagatgaatatgatttctatcggagcttcccgggcttccaggagttctgtgaaagt
caaggagataagctcttgcactgcatgagtcagataatgcagcaccatggctgcagatct
cgcatgagagaccggaataagctgacggggctggaggaaaggtttgacttggttgtggac
tcgaacgacgtcatcctcgaacgagtggggattcttctcgatgaagctgatggggtgaac
aggaaccagcagcctgtcatgcctgcagagtttcagcctcccaagattgttgtttccagc
tggaatcgcatgggttcaagctctggcagtcgttctgagacgttccgactgctccaagcc
aagaatattgctaggcctcagatgaaattcaaggaaaaagttgacaacagcaacacacca
tttattcccaagatcttcatcaaacccaatgcagtaaagcctcttccttcatatttcacc
aacaaacaaatccgtaaagagagacctgaggaccttgatgtcccggctgctctggctgac
ttcattcaccagcagagaactcaggaacatgttgaagacatgtttgcacacccataccaa
tatgaactggatcatcttacaataccagaaagtgttctgtccaagccagaaccgcagatg
tacaaaccgttgactgagaccaagtgctccttcattgacacactggaggatctggtggct
ctgaatgagaagctttgcaaattgtctgaatttgcagtggaccttgagcaccactcctac
aggagtttcctcggcctcacctgtctgatacagatctccagcagagaggaggacttcctc
atcgacgccattgagctccgcagcgagttgtacatcctcaacgaggcattcactgacccg
gctattgtcaaggtatttcacggtgctgactctgacattgagtggctccagagggacttt
ggcttgtatgtcgtcaacctgtttgacacgcatcaggccagccgagctctgaacctggcc
agacattcccttgaccaactgctcaaacacttctgcaatgtgaactcagagaaacgctac
cagctggctgactggaggattcgccctttgccagatgagatggtgcagtacgcccggatg
gacacccactacctcctttacatctatgactgtgtgagggtgcagctgctggactttaaa
cacgggcagcctggcctgctgcagagtgtctggaacaagagcaaagacatttctctgaag
aaatacacgaagcctatatttacagaggagtcatatttggagctgcagaggaagcagaaa
aggtcttttaacacccagcagctcactgccttcagactgctatttgcctggagggacaag
ctggccaggcaggaagatgaaagcaccggatttaccctgcccactcacatgatgaacaag
atatctgaggagctgcccaaagagcctcagggcatcattgcctgctgtaaccctgtaccc
ccgctggtcaggcagcaggtcaatgagctccatttgttagtgcagcaggcaagagaaatg
cctcttcttaaggctgagattgcagctgaaaagaagaaaggactcacacccataaaaaag
cccgaggtcacaatgtttggtcctcatgatacatccagggtctctgaaagcgatctccag
cactgttctcctgatgaactgcctgtcaaacaaggggtgctcttcgcagaggatgagccc
aagatggatgttgatgtgcagaaaacaagtggtcttatggcagcagctaaaatcacacag
ttcgaggagctggaaacacagaatgaccacgagtccctctctgtggctcagatgaaagcc
agacgtatcattgagtgttttgaaaacccttttagaatgtacttaccctccagtgatgtg
cacatcagcaagaatgccaagtttgacccatcttcaaaaatatttgagattagtaaaaga
tggaaactgctgagtatggaacagcaacagaaggagttggaggccaagaaggaggccaat
aggaaagccaaggaagaagcaaaggaacacacaaagaaagtggcagaggaaagaaaccag
gctaaacagagctaccaggagtctctccagaacgttgccactgttcgccagcaggcagcg
gaatctgcaaaaggtggcggaaagaaaagagagagggtcgccagtgaggttggagagtcg
actcccaaaccgagtaagaagcagatgaaatcggcagagaagccccaaaagacagaaccg
ccgccccaagacagcttcaagccttttgactacagtcagtcaaacctcaaagtctttgct
ggtacaaaatccaaagacaacacccagtttgatccaaaccaacaagcccatggttttaag
aaaaagaaaactcccaggggacaaaaatccaatagtggagctggaagccgaagtatgtcg
tacatggctggaaaatctgatagaggattccggcacaactggcccaaaagataa
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