Perca flavescens (yellow perch): 114561244
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Entry
114561244 CDS
T07494
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
114561244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114561244
Membrane trafficking [BR:
pflv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
114561244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
SOS1_NGEF_PH
C1_1
PH_13
Motif
Other DBs
NCBI-GeneID:
114561244
NCBI-ProteinID:
XP_028442928
LinkDB
All DBs
Position
9:19033392..19079404
Genome browser
AA seq
1678 aa
AA seq
DB search
MADSLLNNSWPSFSKLWMKRWSFKRASECKPCQSCGPPSAQICVQPHAPSETGSSSSLSP
ASISEDVFFGSTNKDQDACSVVSDYDCPCVEVSSSVEDLLGLSSSLKDSEYFKDLQGEIA
PSTVTTVPESKTLNVGPQVSLNTDSAAINQPAQTSLSTLSPQDNALSSLYYIHPAEELHQ
NFVVTQLSPKLLPGCTIDRGNSSGPAVGLSLTINLNGLLGSMETAKGITGPEEVKEQPTM
DFDGESDMDSVPILVRSMSTSRRHSWGVPLSPINLGRRLSLDAMAMDSDGEGEDDEEGQK
CLFQSTQQTYSCTACPGEKTDDSRLTVPCPRARVTSMAGNSRHLYSRSEILATDECSRAA
HISRVVQTSKQAARAAGAEEFDPEENLHSTEGHMLMVQKVLQELKLYHGAKQRNNRPDSK
VSGNVTWYEFLNNENDEEEDRTEKVEKGTKVKRTLSSLRNRVTGSFNKDKGKNREKEQQK
ERGKEKEREAKEKVCDSRSSNNHYLMPCAFSSCATCSLCSKTLQRKHGLQCMNCAVNVHK
SCKSLLGECTSSRNKRDFPPRTGSSGSPNLALKDRDREREHSGPSQALDGHPGFHSTPGM
TISPWGPSTQYTSSTTASSLGHSFRHRNSLGSLPGEMDETDALRSKRCNEDAISLAPSTT
ESIIVEDAHYAAVRADLESDAQDLEAESWSLAVDQQFVKKHSKEMVKRQDVIYELMQTEM
HHVRTLKIMLRVYVRELKENLQMDSGKLDCLFPRLENLLELHTHFLSRLKERQRENLVSP
NDRNYAINRLSDILITQFSGEIGERMKDSYGDFCSHHTEAVSYYKEQLQNNKKFQNIIRR
INNLSIVRRLGVTECILLVTQRITKYPVLVERIVQNTEVGSEEHEDLTRALGLIKDTIVQ
VDALVNLHEKNSRLREIHNKMEPKALGKIKDGRVFRREDLVQGRRRLLHEGTVNWKAASG
RLKDILAVLLSDVLLLLQEKDQRYVFATVDNKPSVISLQKLIVREVAHEEKAMFLICASS
NEPEMYEIHTNSKEERNTWMTHIRQTVESRPHTEERLFSEEEEARAFRLKEFQERLSQKD
AVVTQALTEKLQLFADMAESVAGLEDTASRSRLLLRGDASDLQQGESLLKGAITEVENLQ
NLLQSGVRDEAPTSRLEEGNGSGVLPRRADTFGGYDSSPTILSKNGSVKKNFSGECRNRD
RSQRASSDPLLKDLCGSHTLEQTVDECSPARWNRIWSTSFPEAEFFDRVLMLSQRLYSLQ
AIISQQDSHIELQRASLTERASLPGRHRGNVLLEQEKQRTLALQREELASFHKLQSQHRQ
EQQRWEKERERHRQQVEATEARLRQREEECRRLEMHLTEERKELESQRETYQQDLERLRE
STRAVEKEKERLEHQKKIKRKTIEVAPLSGSLNGELLMSSGLNTSPSVSDLPLPQKPLVR
TSLSVAPADYQERPEVMLRREASSSTLPLKTEVPLHLFSTTNQQHKLVGVQQQIPTKLAA
FSSGKGKGGKIGKASHRTDSTASVDMKQMLPLKLSARDDNPLKAKRSISPHQQLPLSAPP
QSLPLQHHPDQFSPPDNAGPDTQPTSSISISHPSNVLKPPMPPAQSHPQPSIQPPTIPPH
SQSTGSLQFQPHLQPQGLSPNAQAHVQVNVHGLSHSHSMPPPYKIATEDLNKEDVIFF
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggcggactctcttcttaacaactcctggccctccttctccaaactctggatgaagaga
tggtccttcaaaagagcatcagagtgcaagccatgtcagtcctgtgggcctcccagtgcc
cagatttgtgtccagcctcatgctcccagtgagacaggatcttcctcctcactatcccct
gcctctatctctgaggatgtcttcttcggtagtaccaataaagaccaggatgcgtgttca
gtagtcagcgactacgactgcccctgtgtggaggtgagcagcagtgtggaggacctactg
ggcctaagctcttctctcaaagactcggagtactttaaagacctgcagggagagatagcg
ccttccacagtaaccacagtcccagagagcaaaaccctaaatgttggcccacaggtgtcc
ctaaacacagacagtgctgccatcaaccagcctgcacagacttctttgagcacactctcc
cctcaggacaatgcgctatcttccctttattatatacaccctgcagaagaacttcatcaa
aactttgtggtcactcagctaagtccgaagttattgccaggttgtaccattgaccgcggt
aactcctccggccctgctgtagggcttagcttgacaattaatctgaatggactgttgggg
tcaatggaaacagcaaaaggaataacaggaccagaggaagtaaaggagcaacccactatg
gattttgatggagaatcagacatggacagcgttcctattttagtcagatccatgtcaacg
tctcggaggcacagctggggtgtccctttgtcccccatcaacctggggaggagactgagt
ctggatgccatggccatggacagcgatggggagggagaggatgacgaggagggacagaaa
tgtctcttccagtcgacccagcagacctacagctgcacagcatgtcctggagagaagaca
gatgactccaggctgacggtcccctgtccaagagccagggtcacaagcatggctggtaat
agcaggcatctgtactcccgctcagagatcctcgccacagacgaatgttcccgcgctgca
cacatttctcgtgttgtgcagacatccaaacaggccgcaagggcagcaggagcagaggag
tttgaccctgaagaaaacttacattctactgaaggacatatgctgatggtacagaaagtt
ctgcaggagctaaagctgtaccatggagcgaagcagaggaacaacagaccagactccaaa
gtttcaggaaatgtcacttggtacgagttcctcaataatgagaatgatgaagaggaggat
cgtacagagaaggtggagaaaggcaccaaggtgaagaggactctaagctctctaaggaac
agggtgaccggctccttcaataaagataagggtaagaaccgagaaaaagagcagcagaaa
gagagggggaaggagaaggagcgggaggcaaaagagaaagtgtgtgacagcagaagcagc
aacaatcactatttgatgccatgcgctttctccagctgtgccacctgctcactgtgcagc
aagaccctgcagaggaagcatggcctgcagtgcatgaattgtgctgtgaacgttcacaag
agctgcaagtctctgctgggggagtgcaccagcagcaggaataagagagattttccaccg
aggaccggctcttcgggatctcctaatcttgcgctaaaagaccgggacagagagcgggag
cactcgggcccatcacaggccctggatggccacccaggttttcacagcaccccaggcatg
actataagtccgtggggacctagcactcagtacaccagctccaccacagcctccagcctt
ggccacagcttccgtcaccgcaacagcttaggatccctccctggggagatggatgagaca
gatgctctccgctccaaacgctgcaacgaagacgcaatttcccttgctccctccaccacc
gagtccatcatcgttgaagatgctcactatgcagcagtgcgggctgatctggagtctgat
gcccaggacctggaggcagagtcatggagtttggcagttgaccagcagtttgtgaagaag
cactctaaagaaatggtgaagagacaagatgtgatatatgagctgatgcagacggagatg
catcatgtgcgaacactgaagatcatgctgcgtgtgtacgtccgtgagttgaaggagaac
ctccagatggactcaggcaagctggactgcctgttcccccgcttggaaaacctcctcgag
cttcacacacatttcctgtctcgtctcaaagagcgacagcgagaaaaccttgtttcaccc
aatgacaggaactacgcaatcaacagattgtcagacattctgatcacacagttctcaggt
gaaataggagagaggatgaaggacagctatggagatttctgcagtcaccacacggaggct
gtcagctactacaaagaacagctacaaaacaacaaaaagttccaaaacatcatacggaga
atcaacaacctgtccattgtgcggaggttaggagtaactgagtgtattctgttggtgacg
cagcgcattaccaagtacccagtactagtggagcgcattgtgcaaaacactgaagttggt
tcagaggagcacgaggatctgactcgggcactgggtcttattaaagacaccatcgttcag
gttgacgcgctagttaatctccatgaaaagaactctcgactccgagaaatacacaacaag
atggagccaaaggcactgggaaaaatcaaagatggcagagtgtttcgcagagaggacctg
gtgcagggccggaggcgactgctgcatgagggcacagtcaactggaaagctgcttctggc
aggctcaaagatattcttgcagtgctcctgtcagatgtgttgctcttgctacaagagaag
gatcagcgatatgtgtttgctacagtggataacaagccgtcagtgatctctcttcagaag
ctgattgtcagggaagtggcccatgaggagaaagccatgtttcttatttgtgcctcgtcc
aatgagcccgagatgtacgagatccacaccaactccaaggaggagcgaaacacttggatg
acacacatacggcaaactgttgagagtcgtcctcatacagaagagaggctgttcagtgag
gaggaagaggcccgagccttcagactcaaagaatttcaagaacggctgagccagaaggat
gcagtggtcacccaggctcttactgagaagctgcagctgtttgcggacatggcagagtcc
gtggcaggtctagaggacacagcttcacgctccagacttctgcttcgaggagacgcctca
gacctccagcagggggagtccctgcttaaaggagctatcactgaggtggagaacctgcag
aacctgctgcagtctggagtgagggacgaggctccaacctcacggctggaggaagggaac
ggctctggggttctgcccaggcgagcagatacctttggtggctatgacagcagccccacc
atcctcagtaagaatggcagtgtgaagaaaaacttttctggcgagtgtagaaaccgagac
agaagccagagagccagctctgaccctctgctcaaagacctctgtggcagccacaccctg
gagcagacggttgatgagtgctctcctgccagatggaaccgcatctggtccacctccttc
ccagaggctgagttctttgacagagtgctgatgctctcccaaaggctctatagtctacag
gccatcatatcacagcaggacagtcacattgagctgcagcgggcctcgttgacggagcgg
gcctccctgcccggccgccacagagggaacgtgctcttggagcaggagaaacagcggacc
ctggccctgcagagagaagagctggccagcttccacaagctgcagtctcagcaccggcag
gagcagcagcgctgggagaaggagagggagaggcaccggcagcaagtcgaggccactgaa
gccaggctccgacaaagggaggaggagtgtagacggctggagatgcatttgacagaagag
aggaaggagctggagagtcagagggagacgtaccagcaggacctggagaggctaagggag
tccaccagagctgtggagaaagaaaaggaacgcctggagcatcagaagaagatcaagagg
aagactattgaggtggctcctctgtctggcagtctgaacggggagctcctcatgtcctct
ggcctcaacacctcccccagtgtctcggacctgcccctccctcagaagcccctggtgcgc
accagcctgtctgttgcaccagccgactatcaagagcgccctgaagtgatgttgcggcgg
gaggcgagctcttccaccctgccgctgaagacagaggtgccccttcatctcttcagcacc
accaaccagcagcacaaactggtgggggtgcagcagcagatccccacaaagctggccgcc
tttagcagcggcaaagggaaaggaggcaagattggcaaagcctcacatcgcactgacagc
actgcctcggtggatatgaaacagatgctgccgctgaagctgtctgcccgagacgacaac
cccctcaaggccaagcgttccattagcccccaccagcagctcccgctgtcagcccctcct
cagtctcttcccctgcaacaccacccagatcaattcagtcctccagacaatgctggtcca
gacacccagcccacctcctccatcagcatctcccacccttcaaatgttctgaagcccccc
atgcctcctgcacagtcccatcctcagccctccatccagcctccaaccatccctccccac
tcacagagcactggctccctccagttccagccccatctgcagccgcagggcctcagtccc
aacgcccaggcccacgtccaggtaaatgttcacgggctcagccacagccacagcatgccg
ccaccttacaagattgccacagaagacctcaataaggaggacgtcatcttcttctaa
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integrated database retrieval system
