Pseudomyxococcus flavus: VZL07_17875
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Entry
VZL07_17875 CDS
T11142
Name
(GenBank) HAMP domain-containing protein
Organism
pfly Pseudomyxococcus flavus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HAMP_His_kinase_fung
HATPase_c
HisKA
GAF_2
ATG17_like
GAF
PDE8A_N
RNase_Y_N
Baculo_PEP_C
CRWN_N
PII1_coiled_coil
Motif
Other DBs
NCBI-ProteinID:
XSE99748
LinkDB
All DBs
Position
4262484..4268939
Genome browser
AA seq
2151 aa
AA seq
DB search
MATKKVSSRRAPVAAPPPPRAREDDAQSLDSRQLLRVLTAVRKGDFTVRMPVDKVGSAGK
VADTLNEIIELSERMAREFARIGTVVGKEGRITQRGNVVGALGSWGDCVESVNTLVADLV
QPTTEMGRVIGAVAKGDLSQTMALEVDGRPLRGEFLRTARLVNGMVEQLGAFASEVTRVA
REVGTDGKLGGQAKVKGVAGTWKDLTDNVNSMASNLTAQVRSIAEVTTAVAKGDLSKKIT
VDVRGEILELKNTINTMVDQLSSFASEVTRVAREVGTEGKLGGQAVVKGVGGTWKDLTDN
VNSMASNLTSQVRNIAEVTTAVAKGDLSKKITVDAKGEVLELKNTINTMVDQLNSFASEV
TRVAREVGTEGKLGGQAEVKGVAGTWKDLTDNVNSMASNLTSQVRNIAEVTTAVANGDLS
KKITVDVRGEILELKNTINTMVDQLSSFASEVTRVAREVGTEGKLGGQAVVKGVGGTWKD
LTDNVNSMASNLTSQVRNIAEVTTAVAKGDLSKKITVDAKGEVLELKNTINTMVDQLNSF
ASEVTRVAREVGTDGKLGGQADVKGVAGVWKDLTDNVNSMASNLTSQVRNIAEVTTAVAN
GDLSKKITVDVQGEILELKNTINTMVDQLNSFASEVTRVAREVGTEGKLGGQAIVRGVGG
TWKDLTDNVNSMASNLTSQVRNIAEVTTAVAKGDLSKKITVDAKGEVLELKNTINTMVDQ
LSSFASEVTRVAKEVGTEGKLGGQAIVRGVGGTWKDLTDNVNSMASNLTSQVRNIAEVTM
AVARGDLSKKITVDVRGEILELKNTINTMVDQLSSFASEVTRVAREVGTEGKLGGQAVVR
GVGGTWKDLTDNVNSMASNLTSQVRNIAEVTTAVANGDLSKKITVDVRGEILELKNTINT
MVDQLNSFASEVTRVAREVGTEGKLGGQAVVKGVAGTWKDLTDNVNSMASNLTSQVRNIA
EVTTAVAKGDLSKKITVDVQGEILELKNTINTMVDQLNSFASEVTRVAREVGTEGKLGGQ
AEVKGVAGTWKDLTDNVNSMASNLTTQVRGIAKVVTSVANGDLKRKLVVDAKGEIAELAD
TINGMIDTLAVFADQVTTVAREVGIEGKLGGQARVPGTAGIWRDLTDNVNQLAANLTTQV
RAIAEVATAVTKGDLTRFITVSAQGEVAALKDNINEMIRNLKDTTRKNTEQDWLKTNLAK
FTRVLQGQRDLLTVSKVILSELAPLVDAQHGVFYISERADGGDQMLKLLASYAYRQRKGL
ANTFKYGEGLVGQCALEKEPILLSDVPDSYIRISSGLGEEVPRNIVVLPVLFEGEVKAVI
ELASFHSFSEVHMGFLEQLTESIGIVLNTIAANMRTEALLKQSQALTDELRKQQEELTET
NKRLEQQATSLQQSEELLKRQQEELRSTNEELQEKARLLSEQKSEVERKNGEVEQAKLAL
EEKAEQLSLTSKYKSEFLANMSHELRTPLNSLLILSQTLSDNVDGNLTSRQVEFAKTIHA
SGADLLELINDILDLSKIESGTMAVDVGPLRFGDLREFVDRTFRQVADKKSLEFHIALAD
SLPGELETDAKRLQQVLKNLLSNAFKFTEAGSVALHIGLAKSGWSTDHATLSAAPAVVAF
TVVDTGIGIPKDKHQIIFEAFQQADGSTARKYGGTGLGLSISREIARLLGGEIRLESDVG
KGSAFTLYLPLAFMAERPQQESVRWEYNPLAAPVASAPVEATSVESPLPSLNRMDIDDDR
ASIQPGDRVLLAVTHLADHAARLRAAAQGTGFKLLVSTEVEGALDAVRNARPAAVAVDLD
LPEMAGWVVLDRLKHDASTRALPVYTVSVEDHRERSLNLGAIGHLRAAADPEAAQAALEA
LKHFVERKARGLLIVEDDPVHRQTLMELLGSDDVEMVAVGTAVEALAALAERRFDCMVLD
LGLPDMPGTELIRRIRETHGAGGPPLIVYTGRELTRAQETELRQVAEAIVVKDAQSPERL
LEETSLFLHRSPAELTEPKRRMLEKARERDPLLVGRKVLVVDDDVRNIFALNTVLERYGM
KVAFAESAREGLEQLEKSSDIELVLMDVMMPEMDGYQAMRAIRRMERFAHLPILALTAKA
MKGDREKCLEAGASDYITKPVDIEKLLSLLRVWLHAPRGTSGKGARTEVSG
NT seq
6456 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaagaaggtttcctcccgccgcgcacccgtcgcggctccccctccgccgcga
gcccgggaggatgatgctcagtcgctcgattcgcgtcagttgctgcgcgtcctcaccgcc
gtccgcaagggcgacttcaccgtgcggatgccggtggacaaggtgggcagcgccggcaag
gtggcggacacgctgaacgaaatcatcgagctcagcgagcgcatggcccgcgaattcgcc
cgcatcggcaccgtggtgggcaaggaaggccgcatcacccagcgcggcaacgtggtgggg
gccctgggctcctggggcgactgcgtcgagtcggtgaacacgctggtggcggacctggtc
cagcccacgacggagatgggccgcgtcatcggcgcggtggccaagggcgacctgtcgcag
accatggccctggaggtggacggccggcccctgcgtggcgagttcctccgcaccgctcgg
ctggtgaacggcatggtggagcagctcggcgccttcgcgtcggaagtgacgcgcgtggcc
cgcgaggtgggcaccgacggaaagctgggggggcaggccaaggtgaagggcgtggccggc
acgtggaaggacctcacggacaacgtgaactccatggcctccaacctgacggcccaggtg
cgcagcatcgcggaagtcaccaccgccgtggccaagggtgacctgtcgaagaagatcacg
gtcgacgtgcgcggcgagattctggagctgaagaacaccatcaacacgatggtggaccag
ctgtcgtccttcgcctcggaagtgacgcgtgtggcgcgtgaggtgggtacggagggcaag
ctgggcggtcaggccgtggtgaagggcgtgggcggtacgtggaaggacctcaccgacaac
gtgaactcgatggcgtcgaacctgacgtcccaggtgcgcaacatcgccgaggtgacgacg
gcggtggccaagggcgacctctccaagaaaatcacggtcgacgccaagggcgaggtgctg
gagctgaagaacaccatcaacacgatggtggaccagctcaactcgttcgcctcggaagtg
acgcgtgtggcgcgtgaggtgggtacggagggcaagctgggcggtcaggccgaggtgaag
ggcgtggccggcacgtggaaggacctcaccgacaacgtgaactcgatggcgtcgaacctg
acgtcccaggtgcgcaacatcgccgaggtcaccaccgccgtggccaacggtgacctgtcg
aagaagatcacggtcgacgtgcgcggcgagattctggagctgaagaacaccatcaacacg
atggtggaccagctgtcgtccttcgcctcggaagtgacgcgcgtggcgcgtgaggtgggc
acggagggcaagctgggcggtcaggccgtggtgaagggcgtgggcggtacgtggaaggac
ctcacggacaacgtgaactccatggcctccaacctcacgtcccaggtgcgcaacatcgcc
gaggtgacgacggcggtggccaagggtgacctgtcgaagaagatcacggtcgacgccaag
ggcgaggtgctggagctgaagaacaccatcaacacgatggtggaccagctcaactcgttc
gcctcggaagtgacgcgtgtggcccgcgaggtgggcaccgacggaaagctgggtggtcag
gccgacgtgaagggcgtggccggcgtgtggaaggacctcacggacaacgtgaactcgatg
gcgtcgaacctgacgtcccaggtgcgcaacatcgccgaggtcaccaccgccgtggccaac
ggtgacctgtcgaagaagatcaccgtcgacgtgcagggagaaatcctggagctgaagaac
accatcaacacgatggtggaccagctcaactcgttcgcctcggaagtgacgcgcgtggcc
cgcgaggtgggtacggagggcaagctgggtggccaggccatcgtgcgcggcgtcggtgga
acgtggaaggacctcaccgacaacgtgaactcgatggcgtcgaacctgacgtcccaggtg
cgaaacatcgccgaggtgacgacggcggtggccaagggcgacctgtccaagaagatcacg
gtcgacgccaagggcgaggtgctggagctgaagaacaccatcaacacgatggtggaccag
ctgtcgtccttcgcctccgaagtgacgcgcgtcgcgaaggaagtgggtacggagggcaag
ctgggcggtcaggccatcgtgcgcggtgtcggtggaacgtggaaggacctcaccgacaac
gtgaactcgatggcgtcaaacctgacgtcccaggtgcgcaacatcgccgaggtgacgatg
gcggtggcgcgcggtgacctctccaagaagatcaccgtggacgtgcgcggcgagattctg
gagctgaagaacaccatcaacacgatggtggaccagctgtcgtccttcgcctcggaagtg
acgcgcgtggcacgcgaggtgggtacggagggcaagctcggcggtcaggccgtggtgcgc
ggcgttggtggaacgtggaaggacctcacggacaacgtgaactcgatggcgtcgaacctg
acgtcccaggtgcgcaacatcgcggaagtgacgacggccgtggcgaacggcgacctgtcg
aagaaaatcacggtcgacgtgcgcggcgagattctggagctgaagaacaccatcaacacg
atggtggaccagctcaactcgttcgcgtcggaagtgacgcgtgtcgcacgcgaagtcgga
acggaaggaaagctgggcggtcaggccgtggtgaagggcgtggccggcacctggaaggac
ctcacggacaacgtgaactcgatggcgtcgaacctgacgtcccaggtgcgaaacatcgcc
gaggtcaccaccgccgtggccaagggcgacctgtcgaagaaaatcaccgtggacgtgcag
ggagaaatcctggagctgaagaacaccatcaacacgatggtggaccagctcaactcgttc
gcgtcggaagtgacgcgcgtggcgcgtgaggtgggcacggagggcaagctgggcggtcag
gccgaggtgaagggcgtggccggcacgtggaaggacctcacggacaacgtgaactccatg
gcctccaacctcaccacccaggtgcgtggcatcgccaaggtcgtgacgtcggtggccaac
ggcgacctgaagcgcaagctggtggtggacgcgaagggtgaaatcgcggagctggcggac
accatcaacggcatgattgacaccctggcggtgttcgccgaccaggtgacgacggtggcc
cgcgaggtgggtatcgaagggaagctgggcggacaggcgcgcgtgcctggaacggccggc
atctggcgcgacctcacggacaacgtgaaccagctcgccgccaacctcaccacgcaggtg
cgcgccatcgccgaggtggccaccgccgtgacgaagggggacctcacgcggttcatcacc
gtgtccgcccagggcgaagtggccgccctgaaggacaacatcaacgagatgatccgcaac
ctgaaggacaccacgcggaagaacacggagcaggactggctcaagacgaacctggccaag
ttcacccgcgtcctccaggggcagcgggacctgctcacggtgtccaaggtcatcctgtcg
gagctggcgccgctggtggatgcccagcacggcgtcttctacatctccgagcgcgcggac
ggcggcgaccagatgctcaagctgctggcgtcctacgcgtaccgccagcgcaaggggctg
gccaacaccttcaagtacggcgaggggctggtgggccagtgcgccctggagaaggagccc
atcctcctgtcggacgtgccggacagctacatccgcatctcctccgggctgggcgaggag
gtgccgcgcaacatcgtggtgctgccggtgctcttcgagggcgaggtcaaggccgtcatc
gagctggcctcgttccacagcttcagcgaggtccacatgggcttcctggagcagctcacg
gagtccatcggcatcgtgctcaacacgattgccgccaacatgcgcaccgaggcgctgctg
aagcagtcgcaggcgctgacggacgagctccgcaagcagcaggaggagctgacggagacg
aacaagcggctggagcagcaggccacctcgctccagcagtccgaggagctgctcaagcgc
cagcaggaggagctgcgcagcaccaacgaggagctccaggagaaggcgcggctgctctcc
gagcagaagtcggaggtggagcgcaagaatggcgaggtggagcaggccaagctcgccctg
gaggagaaggccgagcagctcagcctcacgtccaagtacaagtccgagttcctggcgaac
atgagccacgagctgcgcacgccgctcaactcgctgctcatcctcagccagacgctcagc
gacaacgtggacggcaacctcacgtcgcggcaggtggagttcgcgaagacgattcacgcc
tcgggcgcggacctcctggagctcatcaacgacatcctcgacctgtcgaaaatcgagtcc
ggcaccatggccgtggacgtggggccgctgcgcttcggcgacctgcgcgagttcgtggac
cgcaccttccggcaggtggcggacaagaagagcctggagttccacatcgccctggcggac
tcgctgccgggcgaactggagacggacgccaagcgcctccagcaggtgctcaagaacctg
ctgtccaacgccttcaagttcaccgaggccggctcggtggcgctgcacatcggcctggcg
aagagcggctggtccacggaccacgccacgctgtccgccgcgcccgccgtggtggccttc
accgtggtggacaccggcatcggcatccccaaggacaagcatcaaatcatcttcgaggcc
ttccagcaggcggacggctccaccgcgcgcaagtacggtggcaccggcctggggctgtcc
atcagccgcgaaatcgcgcggctgctcggcggcgaaatccggctggagagcgacgtgggc
aagggcagcgccttcaccctctacctgcccctggccttcatggcggagcgcccgcagcag
gagtcggtgcgctgggagtacaacccgctggccgcccccgtggcgtccgcgccggtggag
gcgacgtccgtcgagtcccccctcccgtcgctgaaccggatggacatcgatgacgaccgg
gcgtccatccagccgggagaccgggtgctgctggcggtgacgcacctggcggaccatgcc
gcgcgcctgcgcgccgcggcccagggcacgggcttcaagctgctggtgtccaccgaggtg
gagggcgcgctggacgcggtccgcaacgcgcggccggcggccgtggcggtggacctggac
ctgccggagatggcgggctgggtggtgctggaccggctgaagcatgacgcctccacccgc
gcgctgccggtgtacacggtgtccgtggaggaccaccgcgagcgctcgctcaacctgggg
gccattggccacctgcgcgcggcggcggacccagaggccgcccaggcggcgctggaggcc
ctgaagcacttcgtggagcgcaaggcgcgcgggctgctcatcgtggaggacgaccccgtc
caccgccagacgttgatggagttgctcggcagcgacgacgtggagatggtggcggtgggc
accgcggtggaggcgctggccgcgctggccgagcgccgcttcgactgcatggtgctggac
ctgggcctgccggacatgcccggcacggagctcatccgccgcatccgcgagacgcacggc
gcgggcgggccgcccctcatcgtctacacgggccgcgagctgacgcgcgcccaggagacg
gagctgcgccaggtggccgaggccatcgtcgtgaaggacgcgcagagcccggagcggctg
ctggaggagacgagcctcttcctccaccgctcgccggcggagctgacggagcccaagcgc
cgcatgctggagaaggcgcgggagcgcgacccgctgctggtggggcgcaaggtgctggtg
gtggacgacgacgtgcgcaacatcttcgccctcaacaccgtgctggagcgctacggcatg
aaggtcgccttcgcggagagcgcgcgcgagggcctggagcagctggagaagtcctcggac
atcgagctggtgctgatggacgtgatgatgccggagatggacggctaccaggccatgcgc
gccatccggcgcatggagcgcttcgcccacctgcccatcctggcgctgacggccaaggcg
atgaagggcgaccgcgagaagtgcctggaggccggcgcgtccgactacatcaccaagccg
gtggacatcgagaagctgctcagcctgctgcgcgtgtggctgcacgcgccgcgaggcacg
tcgggcaagggcgcgcgcacggaggtctccggatga
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