Pseudomonas fluorescens UK4: HZ99_00275
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Entry
HZ99_00275 CDS
T03319
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn01501
beta-Lactam resistance
pfn02024
Quorum sensing
Module
pfn_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HZ99_00275
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HZ99_00275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfn02000
]
HZ99_00275
01504 Antimicrobial resistance genes [BR:
pfn01504
]
HZ99_00275
Transporters [BR:
pfn02000
]
Other transporters
Pores ion channels [TC:
1
]
HZ99_00275
Antimicrobial resistance genes [BR:
pfn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HZ99_00275
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
HZ99_00275
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
HZ99_00275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF8042
Motif
Other DBs
NCBI-ProteinID:
AIG00695
UniProt:
A0A379ICD5
LinkDB
All DBs
Position
complement(101122..102525)
Genome browser
AA seq
467 aa
AA seq
DB search
MKAHLPLVVASLLLAACSNPMSRPDSGLQPPVAWDTASQADALHVNQQWWTAFASPQLDQ
LIEQARIGSYDLASAMARVRQAQAGAVVAGAPLLPELTGGLNANRQKLLRGNGYSELDTN
SNNDAVDYFNASLTATYEIDFWGGKRAARDSAELAVRASEFERATVELTLLSGVATTYTQ
LLALHEQQRIAELNLANAQSVLKLVQTRHDAGSATHLELAQQKSLVAAQQRQLPEVRQRA
EAARISLAALLGQPVQTLHLTPQAFDQLRWPSIAAGMPSDLLSRRPDIASAEAQLAAAQA
DIIVARAAMLPNVTLTANLGSGANRAGDMLRNPFYDLTGALVAPIFNNGRLSAERDRATA
RQDELLQTYRGAIINGFADVEKALSSIRRLDEQRQWQHEELDQAQTAFRIAQSRYEAGAE
DLLTVLETQRTLYAAQDLNVQLRQARLEASIALYKALGGGWQAPTSL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgcacttgcccctcgtcgtcgccagcctgctgctggccgcgtgcagcaacccg
atgtcgcgtccggacagcggtctgcagccacccgtggcctgggacaccgcgagccaggcc
gacgccctgcacgtcaaccagcaatggtggacggcctttgccagcccgcaactcgaccaa
ctgatcgaacaggcccgtatcggcagctatgacctggccagcgccatggcgcgagtgcgc
caggcccaggccggcgctgtggtggccggcgctccgctgctgcccgaactcactggcggg
ctcaacgccaaccggcagaaactgctgcgcggcaacggctacagcgagctggataccaac
agcaacaacgacgcggtggactacttcaatgccagcctgacagccacctacgagatcgac
ttctggggcggtaagcgcgccgcgcgcgacagtgccgaactggcagtgcgcgccagtgag
ttcgagcgcgccacggtggaattgaccctgctcagcggcgtggccaccacctacacccag
ctcctggccttgcacgaacaacaacgcatcgccgagctgaacctggccaatgcgcagagc
gtgctcaagctggtacagacccgccatgacgccggctctgccacccacctggaactggcc
cagcaaaagagcctggtcgccgcgcagcaacgccaattgccggaagtgcgccagcgcgcc
gaagccgcacggatcagcctggccgccctgctcggtcaaccagtgcaaacactgcacctg
acgccccaggcctttgaccaactgcgctggccgagcatcgccgccggcatgcccagcgac
ctgctcagccgccgcccggacatcgccagcgccgaagcacaactggccgcagcccaggcc
gacatcattgtcgcccgcgccgccatgctgcccaacgtcaccctcaccgccaatctgggc
tccggcgccaaccgggctggcgatatgctgcgcaacccgttctatgacctcacaggcgct
ctggtcgcaccgatcttcaacaacggccgcctcagcgccgaacgcgacagggccacggcc
cgccaggatgaactgctgcaaacctatcgcggggcgatcatcaacggcttcgccgatgtg
gaaaaagccttgagcagcattcgccggctggacgaacagcgtcagtggcagcatgaggaa
ttggaccaggcgcagacggcgttccgtatcgcccagagccgctacgaagccggcgcggaa
gacttgctcacggtgctggaaacccagcgcaccctgtatgccgcccaggacttgaacgtg
caactgcgccaggcgcggctggaggcgagcattgccctgtacaaggccctgggaggcggt
tggcaggcaccaacaagcctgtag
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