KEGG   Pseudomonas fluorescens Pf0-1: Pfl01_5644
Entry
Pfl01_5644        CDS       T00283                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pfo  Pseudomonas fluorescens Pf0-1
Pathway
pfo03420  Nucleotide excision repair
pfo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Pfl01_5644 (uvrD)
   03430 Mismatch repair
    Pfl01_5644 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfo03400]
    Pfl01_5644 (uvrD)
Enzymes [BR:pfo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Pfl01_5644 (uvrD)
DNA repair and recombination proteins [BR:pfo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Pfl01_5644 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     Pfl01_5644 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 PcrA_UvrD_tudor AAA_11 AAA_22 DUF1175
Other DBs
NCBI-ProteinID: ABA77380
UniProt: Q3K4C4
LinkDB
Position
6325758..6327941
AA seq 727 aa
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRGIYEAYE
AACQRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLGK
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDSVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGDGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIRDHARHSDVSMWEAMGQLVANKGLTGRAAGALGAFIELIENLAAKCAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFENTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGNQ
SMGGSNLFSGSEIPETGLSLGQAVRHSIFGDGVILNFEGAGAQARVQVNFAEGSKWLMLG
YAKLEAI
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgcgcgatgatctctcccttctgctgaactccctcaacgatgcccaacgccaggccgta
gcggctcccgttggtcgtcaattggtcctggccggtgccggctccggcaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgagaacgcctcgccccactcgattctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgtcaccgcatcgaacaattgctg
ggcatcaatccggccggcatgtgggtcggcaccttccacggcctggcgcaccgcctgctg
cgggcgcactggcaggaagccgggctgagccagaccttccagattctcgacagcgacgac
cagcaacgcttggtcaagcgggtgatccgcgagctggggctggacgagcaacgctggccg
gcccgtcaggcccaatggttcatcaacgggcagaaagacgaaggtctgcgtccgcaacac
attcaagccagcggcgatctgttcctggccaccatgcgcggcatttatgaagcgtacgag
gccgcatgccagcgtgccggcgtcatcgatttctccgaactgctgctgcgcgccctcgac
ctgtggcgcgaccacccgggcctgctggcgcactaccagaagcgcttccgacacattctg
gtggacgaattccaggacaccaacgccgtgcagtacgcctggttgcgtctgctgggcaag
ggcggcgacagcctgatggtggtcggcgacgacgaccagtcgatctacggctggcgcggc
gcgaaaatcgagaacatccaccagtattcttcggacttcccggactcggtgaccatccgt
ctggagcagaactaccgctccacggccggcatcctcaaggccgccaacgccctgatcgcc
aacaacaccgggcgtctgggcaaagagctgtggaccgatggcggcgatggcgaagcgatc
aatctttacgccgccttcaacgagcacgatgaagcacgctacgttgtcgaaaccatcgaa
agcgcgctgaaaaccggcttggcccgcagcgatatcgcgattctctaccgctccaacgcc
caatcgcgcgttctggaagaagccttgctgcgtgaacgcattccgtaccgcatctatggc
ggccagcgcttcttcgagcgggcggaaatcaagaacgccatggcttacctgcgtttgctg
gaaggtcgcggcaatgatgcggccctggagcgggtgatcaacgtcccagcgcgcggcatc
ggcgagaaaaccgtcgaagcgatccgcgaccatgcccgtcacagcgatgtgtcgatgtgg
gaagccatgggccagctggtggccaacaaaggcctgaccggtcgcgccgccggtgcgctg
ggcgcgtttatcgaactgatcgaaaacctggctgccaagtgcgccgagatgccgttgcac
ctgatgacccagaccgtcatcgagcaatccggactgatcgcctaccacgaagcggaaaaa
ggcgagaaaggccaggcccgggtggaaaaccttgaggaactggtcagcgctgcgcgcaac
ttcgagaacaccgaagaagacgaagaactgacgccactggcggcatttctcggccacgct
tcactggaggccggtgacacccaggccgacgagcacgaagacagcattcagttgatgacc
ctgcacagcgccaagggcctggaattcccttacgtgttcctggtgggcatggaagaaggc
ttgttcccgcacaagatgagcctggaagagccgggacgccttgaggaagaacggcgcctg
gcctatgtcggcattacccgggcgatgcagaatctggtgatgacctatgctgaaacccga
cgcctgtacggcagcgaaacctacaacaaggtgtcgcgtttcgtacgggaagtaccgaaa
ggcctgattcaggaagtacgcctgtccaacagcgtcagccggccgttcggcggtaaccag
tcgatgggcggcagcaacctgttcagcggcagcgagattccggaaaccggcctgagcctt
ggccaggctgtccgtcactcgatcttcggcgacggcgtgatcctcaacttcgaaggcgcc
ggcgcccaggcccgggtgcaggtgaatttcgccgaaggcagcaagtggctgatgctcggg
tacgcgaagctggaagccatataa

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