Poecilia formosa (Amazon molly): 103138367
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Entry
103138367 CDS
T07984
Symbol
col6a2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor04510
Focal adhesion
pfor04512
ECM-receptor interaction
pfor04518
Integrin signaling
pfor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103138367 (col6a2)
04518 Integrin signaling
103138367 (col6a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103138367 (col6a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103138367 (col6a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfor04147
]
103138367 (col6a2)
00536 Glycosaminoglycan binding proteins [BR:
pfor00536
]
103138367 (col6a2)
Exosome [BR:
pfor04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103138367 (col6a2)
Glycosaminoglycan binding proteins [BR:
pfor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103138367 (col6a2)
Hyaluronan
Extracellular matrix or blood plasma proteins
103138367 (col6a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
Motif
Other DBs
NCBI-GeneID:
103138367
NCBI-ProteinID:
XP_007552590
Ensembl:
ENSPFOG00000014799
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
METIQKKKKNLKKKKKMMLALETVVLCLLLGALTHAEKADCNQRRECPIHLYFTIDTSET
IALQESPPGALVKSIRSFTEQFVRRLKDEEIRNAVPITWAIGGLHFSQTQEVFSPIQGKD
PFLSSLVRIEKYLGKGTYIDCALRRMSEEMLLGPASSVTPLRFAVVITDGHVTGNPCGGI
KVSAEDARDKGIRVFAVAASTNIEETGLKEIANSPASVFRDDFMAVDLSKGRPTIHTATI
DRIIKTMRHMAFVDCYNVSCLETKGQPGPKGHRGQKGAKGDNGEAGLKGERGRPGDPGIE
GPIGQPGIKGEPGSKGEKGEIGTQGKKGVAGIPGRNGTDGQKGKLGRIGAPGCKGDPGDR
GPDGHPGDVGERGPPGTDGEKGDPGRPGRAGPPGPPGEDGSQGERGSNGSPGVPGTKGAS
GIPGSPGKRGEEGRRGDYGPKGEPGPDGTKGEKGEMGPEGLRGVPGEPGSKGAKGDTGLP
GPRGPPGASGEPGKNGTRGDPGDMGPRGESGQPGPKGDPGRPGFSYPGPRGDPGERGDPG
KRGPPGSRGDCGQKGDPGNKGTPGEPGEPGPTGEPGLRGPRGGPGRDGDPGPEGDPGLTE
CDVMNYIRETCGCCDCEKRCGALDIVFVIDSSESVGLTNFTLEKNFVINTINRLGSFAKD
PQSETGTRVGVVQYSHNGTFQAINLNDSNINSLTAFKEAVKRLEWIAGGTWTPSALKFAY
DHLIRDSRRAKANVTVVVITDGRFDPRDDDRLLPYLCNHPGVDVSAIGIGDMFEQVEENE
SLQSIACQKEGRVMGMRRFADLVAEEFIDKIETVLCPDPVIICPDLPCKSEPAVASCVQR
PVDVIFMLDGSERMGLENHLRAKEFIENVARRLTLANGPTDDTKARLALVQFGSAGDHKE
EFPLTHNLTVIVDSLAAVNYLDSSSALGNAIIYAVNNLVIRQNQRLSRRNAELAFVFITD
GITSTDQLDEGVQAMKRVEGVPTVIALGGDTDEEVLRQVSMGDSSAIFRGDDFFVLGKSA
FFERFIRWIC
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaatacagaagaagaagaagaatttaaaaaaaaagaagaagatgatgctggcg
ttggagaccgtcgtgctctgccttctcctcggagccctgactcacgccgagaaagcagac
tgcaatcagaggagagaatgtcccatacacctgtacttcaccatagacacatctgagacc
atcgcgctgcaggagtcgccccctggagcgttggtgaaaagcatccggtcattcacggag
cagtttgtgcggcgattgaaagatgaagaaatccggaacgctgttccaatcacctgggct
atcggcggactgcacttctcccagacacaggaggttttcagccccatccaaggaaaggac
ccgttcctctcttctcttgtgagaattgagaagtaccttggaaaagggacctacatcgac
tgcgctctccgaagaatgtccgaggagatgctgcttggacccgcttcaagtgtcacaccc
ctgcggttcgctgtggtcatcactgacggccacgtgactggaaacccgtgtgggggcatc
aaggtctcggcggaagacgcgcgtgataagggcatcagggtgtttgccgtggcggcatcg
acgaacatcgaggagacgggactgaaagagattgccaactccccggcgtcggtcttcagg
gacgacttcatggctgtggaccttagcaaaggcagaccaaccatacacaccgcaacgatt
gaccgcattatcaagacaatgagacatatggcattcgtagactgttataatgtgtcgtgc
ctggagacaaaagggcaacctggtccaaaagggcacagaggacagaaaggagctaaagga
gacaacggtgaagcaggactaaagggtgaaagaggtcgcccaggagaccccggcattgaa
ggtcccattggtcagcctggtatcaagggtgaacctggttcaaaaggcgagaagggggag
attggaactcagggcaaaaagggtgtggctggtattccaggacgtaacggaaccgatgga
caaaagggaaaacttggacggattggtgccccaggctgcaaaggagacccaggcgacaga
ggtcccgatggtcatccaggagatgtcggcgaacgtggtcctccaggaactgatggggag
aagggtgaccctgggcgcccaggaagagccggtccccctggcccgcctggagaagatgga
tcacagggagaaagaggaagtaatgggtcacctggcgttcctggaactaaaggagcctct
ggaatccctggaagtcctggaaaacgaggcgaggaaggaagaagaggagattatgggccc
aaaggtgaacctggaccagatggtaccaagggagagaagggcgaaatgggaccagagggc
ttgagaggagtccctggagaaccaggaagcaaaggtgcaaagggagacactggcttgcca
ggacctagaggaccaccaggagcttcaggggagcctggaaaaaacggcaccagaggagac
cctggtgatatgggaccaagaggagagtctgggcagcctggaccaaagggagatcctgga
agacctggctttagctatcctggaccaagaggagatccaggcgaaagaggggacccaggc
aagcgtggaccccctggcagcagaggagactgtggtcagaagggagatcctggaaataaa
ggaactccaggagagccaggtgaaccagggcccacaggggaaccagggctaagaggaccc
agaggaggtcctggtcgagatggagatccaggtccagagggagatcccgggcttactgaa
tgtgatgtcatgaactacatcagagagacgtgtggctgctgtgactgcgagaaacgctgc
ggggccctggatatcgtctttgtcattgacagctcagagtctgtgggactcaccaacttc
accctggaaaagaactttgtcatcaacaccatcaacagactgggatcttttgccaaggac
ccacagtccgaaacaggcacaagggtcggtgtggtgcagtacagccacaatgggaccttc
caagcaatcaatctcaatgacagcaacatcaactcactgacggcatttaaggaagctgtg
aagcggttagagtggatcgcaggaggaacctggactccatctgctcttaagtttgcctac
gaccacctgatcagggacagccgccgagccaaagccaacgtcacggtggtcgtgattaca
gacggtcgctttgacccaagagacgacgacagactgctgccatatctgtgcaatcacccg
ggcgtcgacgtgagtgccatcggcatcggggacatgtttgagcaggtcgaggagaacgag
agtctgcagagcattgcctgccagaaggagggcagagtgatgggaatgaggcgattcgca
gacctggtggcggaggaattcattgacaagattgagaccgtgctctgccctgatcctgtc
atcatatgccctgatcttccatgtaaatcagagccagctgtggctagttgtgtgcagagg
ccggtggacgtgatcttcatgttggacggttcggagaggatgggcctggagaaccacctc
cgggccaaagagttcatcgagaatgtggcccgccgcctgaccctggccaacggcccgacc
gacgacaccaaggcccgtctggctctggtgcagttcggcagtgcgggagaccacaaagaa
gagttcccgctcactcataatctcaccgtcatcgtggattcgctggcagctgtgaactat
ttggactcctcgtctgctttgggcaacgccatcatctatgctgtaaacaacctggtgatc
agacagaatcaacggctatcccggcgcaacgctgaattggccttcgtcttcatcacagat
ggaataacgtccaccgaccaactggacgagggcgtgcaggccatgaagagagtggaaggc
gttcccacggtgatcgctttgggaggcgacaccgacgaagaggtgctgcgccaggtgtca
atgggagactcatctgccatctttaggggcgacgacttcttcgtgctgggcaaatctgct
ttctttgagcgcttcatccgctggatttgctag
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