Poecilia formosa (Amazon molly): 103151704
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Entry
103151704 CDS
T07984
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103151704 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfor03021
]
103151704 (polr1a)
Enzymes [BR:
pfor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103151704 (polr1a)
Transcription machinery [BR:
pfor03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103151704 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
GAGA_bind
BUD22
Motif
Other DBs
NCBI-GeneID:
103151704
NCBI-ProteinID:
XP_007571947
Ensembl:
ENSPFOG00000005025
UniProt:
A0A087XIX0
LinkDB
All DBs
Position
Unknown
AA seq
1693 aa
AA seq
DB search
MLFSKEVPWRRLEGMSFGLYSPEEIRKLSVKTITNSKFLDAVGNVAQNSLYDLALGPTDT
KEICSTCCQDFNNCPGHFGHIELPLPVYNPLFFDKLYLLIRGSCLSCHMLTCPRAAIHLL
VNQLRLLERGAMEEVHLVERVLNQHLEENPKATGDEIEQVLREFTSMVIGANAEASQNSK
PIKHLVEKKSSLINDFWRVQLNTRKCPYCRVGRSTVRREHNTKLIITMPTGGQTDENTED
LLTGKRVFLTASTAREHISKLWEKEGFFLKFLFPGLEESSGSEGQKSFYPDLFFLELLVV
PPCRYRPINRLGDQMFTNGQTVNMQAVMKDCSIIRKLLTLIAGEKQTEEVEEVTLDPEDQ
TFLSGISGVTLPDKLYNMWIRLQSHVNIVFDSEMDKLITDKYPGIRQILEKKDGLFRKHM
MGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLNGPNVHP
GASMVINEDGRKTILSPSSAAQREAVAKQLLTPCPGPHKMPMKIVNRHIKNGDVLLLNRQ
PTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQTELGRAEAYTLVS
TNQQYLVPKDGKPLAGLIQDHMVSGTKMTIRGCFFTKDQYTELVYRGLTDKTGRIRLLAP
ALLKPQQLWTGKQVVSTLLLNILPDKAVPLNLTGKAKIPGKAWIQLPPRSSPGYNPDSMC
ESQVVIRQGELLVGVLDKAHYGSSPYGLVHCCYELYGGETSGKLLSCLARLFTAYLQLYR
GFTLGVEDILVKPGANMRRKQIIQESLKIGTTALQAAFKLPPSMTPAEAASRWQDAHLSP
DQRDFSLADHKFKEVANQVNNDINKVCMPVGLHTPFPDNNLQLMVQSGAKGSTVNTMQIS
CLLGQIELEGRRPPLMPSGKFLPCFQPYDPSPGAGGFVSGRFLTGIKPQEFFFHCMAGRE
GLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQ
PRQFPFIENNYEVIRKSQNLDSVLARLDPHTAAHHFTAIQRWKAKRELACPRRGAFLLFS
QKKLAKLREAMPSTEPLPAQDPAVLQLVKDWHSLDEAGRAKYARRSSRCPEPTLGLFRPD
VCFGSVSENFHDITEKYLQNRGNATEDDMETQRLRQLLHYKWQRSLCDPGEAVGLLAAQS
IGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSVPVLNNKKALKRA
KTLRKQLSRVCLAEVLQKVDVVETLRIETYQRLQLFKVTFHFLPPERYRDDKLLTPHQIL
RYMETRFFRLLLEAIKKRTAKLASIAVETRKATPGDKNMDEDGTAGAQDGGGEEEEEERE
VVDDQGDEGDADASDAKRKSKQAEEVDYESEDEGEGDDAEEDEGEEENSQANAVEETQPE
SADTGEQQQEKKKKKKKKKEMKAEQEGESSVQMRVNSVLSSNSAIQRYSFDQQEELWCEV
ELEFPMNRIHFDLTSVLSTLAQNAVIMETRGLTRCLLSETTTKSGEKQTVLNTEGINMHE
IFKYNDILDVNKLYSNEVHAMASTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADY
MCFEGIYKPLNRHAIMSNSSPLQQMTFETSFKFLKQATMLGSRDQLVSPSACLVVGKVVK
GGTGLFELKQPLQ
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttccaaagaagtgccatggcggcggctggagggcatgtcgtttggcttgtac
tcacccgaagaaataaggaagttgagcgtgaaaaccatcaccaactccaagtttctggac
gctgttggaaatgtggcccagaacagtttgtatgacctggctctggggccaacagacacc
aaagagatttgttccacctgctgtcaggatttcaacaactgtccaggacactttggacac
atagagctgcctctaccagtctacaacccactgttctttgataaactctacctgttgatc
cgcggctcgtgcctgtcgtgtcacatgttgacatgtccccgcgccgccatccacctgctg
gtcaaccaactccggttactggagcgtggagccatggaggaggtccaccttgtggagaga
gttcttaatcagcaccttgaagagaaccccaaagccactggagatgagatcgagcaggtg
ctgagggagttcaccagcatggtcattggagcgaacgctgaggcttcacagaactccaaa
cccattaaacatctggttgagaagaagagcagcctgataaacgacttctggagggtccag
ctgaacaccaggaagtgtccgtactgcagagttggcaggtcaacggtgcgtcgcgaacac
aacaccaagctgatcatcaccatgccaacgggaggacaaactgatgaaaacacagaagat
cttctgactggaaagagagtgttcctcactgccagcaccgccagggagcacatcagtaaa
ctctgggagaaagaaggtttcttcctgaagttcctgtttcctggtctggaggagagctca
gggtctgagggacagaagagtttctacccagacctgttcttcctggagctgctggtggtt
ccaccctgcaggtatcgccccatcaatcgccttggcgaccagatgttcaccaacggccag
acggtcaacatgcaggctgtgatgaaggactgcagcatcatcaggaagcttctgactctc
atagcaggagagaagcaaactgaggaggtggaggaagtgacgttggacccagaggatcag
acattcctgtcaggaattagcggagtgacgttaccagataagctctataacatgtggatc
cgcctgcagagccatgtcaacatcgtcttcgacagtgagatggacaaactgataacggac
aaataccccgggatcagacagatcctggagaagaaggatggattgttccggaagcacatg
atggggaagcgggtggactacgccgcccggtccgtcatctgtcctgacatgtacatcgga
accaacgagatcgggatccccatggtgtttgccaccaagctgacctaccctcagcccgtc
acgccctggaatgtgaaggagctccggcaggccgtcctcaatgggcccaacgtccacccc
ggcgcctccatggtgattaacgaggacggcaggaagaccatcctgtcgccgagcagcgcc
gcacagagggaggcggtcgccaagcaactgctgacgccctgtcccggtccacacaagatg
cccatgaagatcgtgaatcgacacataaagaacggagacgttctgctactcaacagacag
cccaccctgcacagaccctccattcaagcccactgcgctcgcatcttacctggagagaag
gtcctgcggcttcactacgccaactgcaaggcgtacaacgccgactttgacggagacgag
atgaacgcccacttccctcagaccgagctgggccgagccgaggcctacacgttggtcagc
accaaccagcagtacctcgtccccaaggacggtaaacctttagcgggcctcatccaggac
cacatggtgtcaggaaccaagatgaccatcagaggctgcttcttcaccaaggaccagtac
actgagctggtgtaccgagggctgaccgacaagacgggccggatcagactgctggccccg
gccctcctcaaacctcagcagctgtggaccggaaagcaggtcgtctccactttactgctg
aacatcctcccagacaaagccgtcccccttaacctcactggcaaagccaaaatccccggc
aaggcttggatccagctgccgcctcgatcttctccggggtacaacccggatagcatgtgt
gagtcacaggtggtgatccgtcagggcgagctgctggtcggcgttctggataaagcacac
tacggctcgtcgccctacggtttggtccactgctgctatgaactgtacggaggggagacc
agcgggaagctgctcagctgcctggctcgactcttcaccgcctacctgcagctctacaga
ggcttcactctgggagtggaagacattctggtgaaacctggagccaatatgcgaaggaaa
caaatcatccaagagtctctgaaaatcggcaccacggccttgcaggctgccttcaaactg
cctcccagcatgactccggctgaagccgccagtcggtggcaggacgctcacctcagcccc
gaccagagagactttagcttggccgatcacaaattcaaggaagtggccaaccaagtgaac
aacgacatcaacaaggtgtgtatgccggtcggactgcacaccccgttcccagacaacaac
ctccagctcatggtgcagtctggagctaaaggctccaccgtcaacaccatgcagatctcc
tgcctgctgggtcagatcgagctggagggccgcaggccgccactgatgccatcaggaaag
tttctgccttgctttcagccgtacgacccttcacctggagcagggggcttcgtttctgga
cgcttcctcacaggaatcaagccacaggagtttttcttccattgcatggctgggagagaa
ggcctggtggacacagctgtgaaaacgtcccgatcaggatatctgcagagatgcatcata
aagcacctggagggtctggtggtgcagtacgacctgaccgtcagagacagcgacggctcc
gtggtccagttcctgtatggcgaggatgggctggacatccccaagacccagttcctgcag
ccgaggcagttcccgttcatcgagaacaactacgaggtcatcaggaagtcacagaacctg
gacagcgttctggcccgtttggaccctcacactgcagcccaccacttcacagccatccag
cgctggaaagcaaagagagagctggcatgtccccgcagaggagcctttctactgttttcc
caaaagaagctagcgaaactacgagaggccatgccgtcaacagagccgctgcccgctcaa
gaccctgcagtgctgcagttggtgaaggactggcactctctggacgaagccggcagagcc
aaatacgccaggcggtcgtcccgctgccccgagccgaccctgggcctgttcaggcccgac
gtctgcttcgggtcggtgtcggaaaacttccatgacatcaccgagaaatacctgcagaac
agaggcaacgccacagaagatgacatggagacacagaggctgcggcagctgctccactat
aagtggcagcgctccctgtgtgacccaggggaagctgtgggcctgctggcggctcagtcc
ataggcgagccctccacccagatgaccctcaacaccttccacttcgcgggcagaggagag
atgaacgtcactctgggaatccctcgactgagggagatcctaatggtggccagttccaac
attaaaacccccatgatgagcgtcccggtgctgaacaacaagaaggccttgaagagggcc
aaaaccctgcgaaagcagctcagcagagtctgcctggctgaggtgctgcagaaggtggat
gttgtcgagacgcttcggatcgaaacttatcaaagactgcaattgtttaaagtcaccttt
cacttcctccctcccgagcgttaccgtgacgacaagcttttaactccccatcagatcctc
cgctacatggagacaaggtttttccgtctcctcctggaagccattaaaaagcgcacagct
aagctggcctccatcgccgtggagacgaggaaggccacccctggagataaaaacatggac
gaggacgggaccgcgggggcccaggacggcggtggagaagaggaggaggaggaaagagag
gtggttgatgaccagggggatgaaggagacgccgacgcgtcagatgccaagaggaaaagc
aagcaggcggaggaggtagactacgaaagcgaagacgagggcgaaggcgacgatgccgaa
gaggatgagggcgaagaggagaacagccaggcaaacgctgtggaggagacccagcctgag
tcagcagacactggagagcagcagcaggagaagaagaagaagaagaagaagaagaaagaa
atgaaagcggagcaagagggagagtcctcggtccagatgagggtgaactcggttctgtcg
tctaactcggccatacagagatactccttcgatcagcaggaagaactctggtgtgaggtg
gagctggaattccccatgaacaggatccacttcgacctgacctcggtcctgtcgactctg
gcccagaacgccgtcatcatggagacccggggcctgacgcggtgcctgctgagcgagacc
acgaccaagtctggggaaaaacagacggttctcaacacagagggcatcaatatgcatgaa
atctttaagtacaacgatatcctggacgtcaacaaactgtactccaatgaggtccatgcc
atggccagcacctacgggatcgaggtggctctgaaagtcatagagaaggagatcaaagac
gtctttgcagtttatgggattgaggttgaccccaggcatctgtcattggtggcagactac
atgtgtttcgaaggcatctacaagccgttaaaccgacacgccatcatgtcgaactcgtcc
cctctgcagcagatgaccttcgagaccagcttcaagttcctcaaacaggccaccatgctg
gggtcacgtgatcagctggtttcaccctccgcctgcttggttgtggggaaggtggtcaaa
ggtggaacagggctgtttgaactgaagcagcctctgcagtag
DBGET
integrated database retrieval system
