Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_15360
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Entry
PFREUD_15360 CDS
T01252
Symbol
polA
Name
(GenBank) Putative DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Pathway
pfr03030
DNA replication
pfr03410
Base excision repair
pfr03420
Nucleotide excision repair
pfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFREUD_15360 (polA)
03410 Base excision repair
PFREUD_15360 (polA)
03420 Nucleotide excision repair
PFREUD_15360 (polA)
03440 Homologous recombination
PFREUD_15360 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfr03032
]
PFREUD_15360 (polA)
03400 DNA repair and recombination proteins [BR:
pfr03400
]
PFREUD_15360 (polA)
Enzymes [BR:
pfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFREUD_15360 (polA)
DNA replication proteins [BR:
pfr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PFREUD_15360 (polA)
DNA repair and recombination proteins [BR:
pfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PFREUD_15360 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PFREUD_15360 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH
IMS_HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
CBL57035
UniProt:
D7GES4
LinkDB
All DBs
Position
complement(1683829..1686507)
Genome browser
AA seq
892 aa
AA seq
DB search
MTETARLLVIDGHSMAFRAFYALPVENFSTSTGQYTNAVYGFTSMLINLLRNEEPTHLGV
AFDVSRRTFRTDIYEDYKGTRAKTPEEFSGQIGLIKQVLDAMGIAHAELEGFEGDDIVAT
WSAQADAKGWENLIVSGDRDSFQLVDDNTTVLYPKKGVSELSRMTPEAVEAKYGVSPTHY
PELAALVGDTSDNLTGVPGVGPKTAAKWLAKYGDLANLLDHADEIKGKVGDSLRAHLDDV
KRNRELNRELTDLKLPVDVEGLARAEINREAVHEVFDVLQFRTLRDRLFSVFPEAGETKG
EEGFELEVTRPEPGRLGDWFAAHRSDDPIGVEATGHWGAGTGDIDTLAFATTSDDAACVD
VPELTPDDEKALAAWLTDPQATKAMHGAKGPLLALWARQLDLAGLDSDTQLAAYLLRPDQ
RSYDLDDLALRHLGRELRVQDSEQVNQETLDFGSERQPAETAMLRARAIAELAGVLDGEL
DDTSQRGLLHSLEMPLERVLARMEQRGVAIDMDVLDQLRSEYDARVQAAEQAAFAAIGTQ
INLGSPKQLQAVLFDQLDMPKTKRTKSGYTTDADALEKLYQKTRHPFLEHLLAYRDTIKL
RQIIDTLIKSTSDDGRIHTTYVQTVAGTGRLSSTDPNLQNIPIRTPEGRRIRDAFVPGEG
FEGLMSADYSQIEMRVMAAASGDKTLIHAFASGADFHSMTASHVFDVPVEQVTPAQRSSV
KQMNYGLAYGLSAYGLSSRLNVSVPEARALMDQYFQTFGPVRDYLDSLVEKARKQGYTET
MLGRRRYLPDLNSSNRQRRQMAERMALNAPMQGTAADIIKTAMLQVEQELSASGLRSRML
LQIHDELVLEVAAGERDRVQQIVGDKMKHAIELTVPLDVSFGYGRSWNAAAH
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
gtgactgagactgcgcgactgctggtgatcgacggccattcgatggccttccgggcgttc
tatgcgttgcccgtggagaacttctccacctccaccgggcagtacacgaacgccgtctac
ggcttcacgtcgatgctcatcaacctgctgcgcaacgaggaaccgacgcatctgggcgtg
gccttcgacgtctcacgacgcaccttccgcaccgacatctacgaggactacaagggcacc
cgcgcgaagacccccgaggagttctccggccagatcgggctgatcaagcaggtgctggac
gcgatgggcatcgcccacgccgagctcgagggtttcgagggcgacgacatcgtcgccacc
tggtcggcccaggccgacgcgaagggctgggagaacctgatcgtgtcgggggaccgcgac
agcttccagctggtcgacgacaacaccacggtgctctatccgaagaagggcgtctccgag
ttgtcacgcatgacgcccgaggccgtcgaggccaagtacggcgtcagccccacccattat
ccggagctggccgcactggtcggcgacaccagtgacaacctcaccggcgtgcccggggtc
ggccccaagacggccgccaagtggttggcgaagtacggcgacctggcgaacctgctcgac
cacgccgacgagatcaagggcaaggtgggcgacagcctgcgggcgcacctcgacgatgtg
aagcgcaaccgcgagctcaaccgggaactgaccgacctcaagctgcccgtcgacgtcgag
ggcctggcgcgggccgagatcaatcgcgaggccgtccacgaggtcttcgacgtcctgcag
ttccgcaccctgcgcgaccgcctgttcagcgtcttccccgaggcgggggagaccaagggt
gaggagggcttcgagctcgaggtcacccgtccggagccgggcaggctcggtgattggttc
gcggcccatcgcagcgacgacccgatcggcgtggaggccaccgggcactggggcgccgga
accggggacatcgacacgctggccttcgcgacgaccagcgatgacgccgcatgcgtcgac
gtgcccgaactgacccccgacgacgagaaggccctggcggcgtggctcaccgacccgcag
gcgaccaaggccatgcacggcgccaagggtccactgttggccctgtgggcacgccagctc
gaccttgcgggactggacagcgacacccaattggccgcctacctgctgcgtcccgaccag
cgcagctacgacctggacgaccttgccctgcgccatctgggacgcgagctgcgggtccag
gattccgagcaggtgaaccaggagaccctcgacttcgggtccgaacgccaacccgccgag
accgccatgttgcgggcacgcgccatcgcggagctggccggggtgctcgacggcgagctc
gacgacaccagccagcgcggcctgctgcacagcctcgagatgccgctggaacgtgtgctg
gcgcgcatggagcagcggggcgtggccatcgacatggacgtgctcgaccagctgcgcagc
gaatatgacgcgcgcgtgcaggccgctgagcaggcagcgttcgcggccattggcacccag
atcaacctcggctcgcccaagcagctgcaggcggtgctgttcgaccagctcgacatgccg
aagaccaagcgcaccaagtcgggttacaccaccgacgccgacgccctggagaagctgtac
cagaagaccaggcatcccttcctcgagcacctgctggcctatcgcgacaccatcaagttg
cgccagatcatcgacaccctcatcaagtcgaccagcgatgacgggcgcatccacaccacc
tatgtgcagaccgtggcgggcaccggccgcctgtcgagcaccgaccccaacctgcagaac
atccccatccgcacccccgagggacgccgcatccgcgatgccttcgtgcccggcgagggc
ttcgagggcctgatgagcgccgactactcccaaatcgagatgcgggtgatggcggcggcc
tccggcgacaagacgctgatccatgccttcgcatcgggtgccgacttccactcgatgact
gcctcgcatgtcttcgacgtgcccgtcgagcaggtgacgccggcccagcgctccagcgtg
aagcagatgaactacgggctcgcctacggcctgtcggcctacgggctgtccagccggttg
aacgtctcggtgcccgaggcgcgggcattgatggaccagtacttccagaccttcgggccc
gtgcgcgactatctcgacagcctcgtggagaaggcccgcaagcagggctacaccgagacc
atgctgggcaggcgtcgctatctgcccgacctgaactcgtcgaaccgccaacgtcgccag
atggcggagcgcatggccctcaacgccccgatgcagggcaccgcggctgacatcatcaag
accgccatgctccaggtcgagcaggaactgtcggcctcgggcctcaggagccgcatgctg
ctgcagatccatgacgagctggtgctcgaggtggcggcgggggagcgcgaccgcgtgcaa
cagatcgtcggcgacaagatgaagcatgcgatcgagttgacggtgcccctcgacgtgtcc
ttcggctatggccgcagctggaacgccgcagcccactga
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