Peribacillus frigoritolerans: L8956_02335
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Entry
L8956_02335 CDS
T08180
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfri
Peribacillus frigoritolerans
Pathway
pfri03420
Nucleotide excision repair
pfri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L8956_02335 (pcrA)
03430 Mismatch repair
L8956_02335 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfri03400
]
L8956_02335 (pcrA)
Enzymes [BR:
pfri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L8956_02335 (pcrA)
DNA repair and recombination proteins [BR:
pfri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L8956_02335 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
L8956_02335 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ULM97606
LinkDB
All DBs
Position
487160..489406
Genome browser
AA seq
748 aa
AA seq
DB search
MQYLAEKLLIGLNEQQQKAVKATDGPLLIMAGAGSGKTRVLTHRIAFLMVEKEIAPWNIL
AITFTNKAAREMKERIRAILGGASEDIWISTFHSMCVRILRRDIDRIGFNRNFSILDTTD
QQSVIKQIMKDRNMDTKKYDYRAILGSISSAKNELVGPEEYLKTASDYFTKVTADVYTEY
QKRLRKNSALDFDDLIMMTIQLFQLVPEVLEYYQRKFQYIHVDEYQDTNRAQYMLVKLLA
SRFRNLCVVGDSDQSIYRWRGADIANILSFEKDYPNANMIFLEQNYRSTKKILAAANKVI
DNNQNRKPKNLWTENADGNKIFYYRADNEQGEAQFVAGKINELVQDGSRKYSDIAILYRT
NAQSRVMEEVLLKSNINYAIVGGTKFYDRKEIKDLLAYLRLIANPDDDISLRRVINVPKR
GIGATSMDKVADYADQYDVSIYKALESVEMAGISGKATKAAREFHTLITNYTNQQEYLSV
TELVEEVIEKTGYREMLQAEKTIESQSRLENIDEFLSVTKAFEDNSEDKSLVGFLTDLAL
VADIDQLDENTEEATNTVTLMTLHSAKGLEYPVVFLLGLEEGVFPHSRSLMDEEEMEEER
RLAYVGITRAENELFISNAQMRTLYGRTSMNPVSRFISEIPEELLEDLKPKPAPRARQTP
FSSSRTGSPSTASTRKVPAFGKAVSAPSATGGEEIGWAVGDRASHKKWGIGTVVSVKGEG
EGKELDIAFPSPIGIKRLLAKFAPVEKA
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatttagcggaaaaattattaattggtttgaatgaacagcaacaaaaagcagtg
aaagcaacagatggtccacttttaatcatggctggggcaggaagtggaaagacgcgtgtg
ctgactcaccgaatagctttcttgatggtcgagaaggaaatagcgccttggaacatcctt
gcaatcacgttcaccaacaaagcggcacgtgagatgaaggagaggatccgtgccatactt
ggcggtgcatccgaagatatctggatttcgactttccactcgatgtgtgtccgtattcta
cgaagagatatcgaccgtatcggatttaataggaacttctcgatattggatacgacggat
cagcaatcggtcataaaacaaatcatgaaagaccgtaatatggatacaaagaaatatgat
tatcgtgccattttgggcagcatcagttcagcgaaaaatgaattggtcgggccggaagag
tacctgaagacggcgtctgattacttcactaaagtaacggccgatgtttatacggaatat
caaaaacggctgcgcaaaaattcagcgctcgatttcgatgatttgatcatgatgacgatt
caattgttccagctcgtacctgaggtgcttgaatattatcagcgtaaatttcaatacatt
catgttgatgagtaccaagatacgaacagggctcaatacatgcttgttaaattattggct
tcacgcttccgtaatctctgtgttgtcggggattccgatcaatcgatctatcgttggcgc
ggtgcggatattgcgaatatcctttcatttgaaaaagattatccgaatgccaacatgatt
ttccttgaacagaattaccgctcgacgaaaaagatccttgcagctgcgaataaggtcatc
gataacaatcaaaaccgtaagccgaaaaatctttggaccgagaatgcagatggcaataag
atattctattaccgtgcggacaatgaacaaggggaagcgcaattcgtagccggaaagata
aatgagttagttcaggacggcagcaggaagtattcagatatagcaatactttacagaacg
aatgcacaatcacgtgtcatggaggaagttctgcttaaatccaatattaattatgcaata
gtcgggggcactaagttctatgaccgtaaagagattaaggatttacttgcctatcttcga
cttattgcgaaccctgatgatgacatcagccttcgccgtgtaatcaatgtgccaaaacgc
ggaattggtgcaacttcgatggacaaagtggcagattatgcagatcaatatgatgtttcc
atatataaagcactggagtctgtggaaatggcagggataagcgggaaggccaccaaagcg
gcaagggaattccatacgctgatcactaattatacaaatcagcaggagtacttatccgtg
acggaacttgtggaggaagtcatcgagaaaaccggttaccgtgagatgctgcaggcagaa
aaaacgattgaatcacaaagccggcttgaaaatatagatgagtttttatctgttacgaaa
gcattcgaagataacagcgaggacaaatcattggtgggctttttgactgacctggcgttg
gttgccgatatagaccaacttgacgagaataccgaagaagctacaaatacggtaacgttg
atgacattgcattcagcgaagggacttgaatatccggtggtctttctattgggccttgaa
gagggggttttccctcacagccgctctctcatggatgaagaggagatggaagaagaacgc
cgcctggcttatgtgggaattacaagggccgaaaatgaactattcataagcaatgcccaa
atgcggacattgtatggacggacgagcatgaatcccgtttcacgtttcatcagtgaaata
ccagaggaacttctagaagacctaaaaccgaaacctgctcctagggctaggcaaacgcct
ttcagctcttcgaggaccgggtctccttcaacggcttcaacaagaaaagtgcctgccttt
ggaaaagctgtttctgcaccatccgcaacgggcggtgaagaaattggctgggctgtcggt
gaccgtgcctcccataaaaaatggggtataggaaccgtggtgagcgtaaaaggggaaggc
gaaggaaaggaattggatattgcctttccaagtccaatcggcatcaaacgcctattggcg
aaatttgcaccagttgaaaaagcataa
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