Pelosinus fermentans: JBW_01703
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Entry
JBW_01703 CDS
T03813
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pft
Pelosinus fermentans
Pathway
pft03030
DNA replication
pft03430
Mismatch repair
pft03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JBW_01703
03430 Mismatch repair
JBW_01703
03440 Homologous recombination
JBW_01703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pft03032
]
JBW_01703
03400 DNA repair and recombination proteins [BR:
pft03400
]
JBW_01703
Enzymes [BR:
pft01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JBW_01703
DNA replication proteins [BR:
pft03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JBW_01703
DNA repair and recombination proteins [BR:
pft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JBW_01703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
NP_C_Orthomyx
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AJQ27053
UniProt:
I8TUE9
LinkDB
All DBs
Position
2001500..2002054
Genome browser
AA seq
184 aa
AA seq
DB search
MDFVAIDFETANASRSSVCSMAAVTVENGQIVRSAYSLIRPPVLKFDFRNIQVHGIHPEQ
VLNKPTFDQLWERIRPHLENKIVIAHNATFDISVLRSILREYSLPVPAFKHACTVQIAKK
AWPGGENYKLNTLAQRFRIDFDHHNALHDARTCAQIALLAGQELKANNFLQMMHLLKLSV
KNFM
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggattttgttgcaattgattttgaaacggccaatgccagccgatcgagtgtatgtagt
atggcggctgtaacagtagaaaatggacagattgtgcgctcggcttattcgttaattcga
ccacctgtgctaaagtttgattttcgtaatatacaagttcacggcatacatccagaacag
gtattgaataaaccaacctttgatcaactgtgggaaagaatccggccgcatcttgaaaat
aagatcgtgatcgctcacaatgcgacctttgatattagtgtattacgaagtatcttacga
gaatattctttacctgttcctgcgtttaagcatgcttgtacggttcaaattgccaaaaaa
gcatggccaggtggagaaaactataagttaaataccctggcccagcgttttcggatcgat
tttgatcatcataatgctttgcatgatgctcgaacttgtgctcaaatcgctctgcttgcc
gggcaggaattaaaagcgaataattttttgcagatgatgcatttgctaaagctttcggta
aaaaattttatgtga
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