KEGG   Pelosinus fermentans: JBW_02280
Entry
JBW_02280         CDS       T03813                                 
Name
(GenBank) Protein hfq
  KO
K03666  host factor-I protein
Organism
pft  Pelosinus fermentans
Pathway
pft02024  Quorum sensing
pft03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pft00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JBW_02280
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JBW_02280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pft03019]
    JBW_02280
   03036 Chromosome and associated proteins [BR:pft03036]
    JBW_02280
Messenger RNA biogenesis [BR:pft03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     JBW_02280
Chromosome and associated proteins [BR:pft03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    JBW_02280
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AJQ27626
UniProt: I9DH47
LinkDB
Position
2566092..2566358
AA seq 88 aa
MLNKAINLQDSFLNQIRKENNLPVIIYLINGFQLRGVVKGFDNFTVIIENDGKQQLVYKH
AISTITPLRPLSSTSHEKKEDNKSDKSL
NT seq 267 nt   +upstreamnt  +downstreamnt
atgctaaataaagctattaacttacaagatagttttctaaaccaaatccgcaaagaaaac
aatctgcctgtaattatttatcttattaacggtttccaattgagaggtgtcgttaaagga
tttgataactttactgtaattatagaaaatgatggtaaacagcaattggtatataaacat
gccatatcgacgattacgcctctgagaccgctatcatcaacttctcatgaaaaaaaagaa
gataataaatcagataaatcactataa

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