Polistes fuscatus (common paper wasp): 122523659
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Entry
122523659 CDS
T07683
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pfuc
Polistes fuscatus (common paper wasp)
Pathway
pfuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122523659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfuc03019
]
122523659
Messenger RNA biogenesis [BR:
pfuc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122523659
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122523659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
122523659
NCBI-ProteinID:
XP_043501499
LinkDB
All DBs
Position
Unknown
AA seq
2406 aa
AA seq
DB search
MAGHEGEECEGRRVRLRGEKKAKKKKKKKGLRTCCSILVQWKGLEADRHLLRSLLSYVDF
STGEPPESSAKDYFQVQLLKQECTNLLSKPSLISNFCFAIDHPLHQQKTLNPSPQFFLHL
KKVLGLTLVQEVAYAIVLQHSENIDIRTLSQEYVKKQLPELIKNYINSETSNKNHEEGLH
DSSPEVLHLILSQVFHIPNQFGVSSEAKEKFLKNLRRDFPRELVPVVLAPLLYPGDGETP
QAKIELNMAVNQMDGTSLVELIMELGYGFTSSVEECRSALAGLGAREISPACIARVLSHM
ARSCNNLDDAGGLQSFWGNSASTQDANKEKTSENIPPTTWNVEVFIQTLKETQSTILWNE
VIVKLDHAEFIIKDRQGLNLLIMGLRLGLQHQGYPPDVFPVELFYRHWENVEGQFSLVQQ
ILKCPDIFCFADYPYHSVTVDVLKAAPEGDSKEAQTWRSLYFVELLLHIAERGLYGPVQE
IFKWPIQHCPDVLVLALLQINPPITLLRQELLSTLMPIFFGNHPNSAVILHHAWHANNVK
IKSIIMHAMAEWYIRGDHDQTRLSRILDVAQDLKALSALLNAQSFPFVIDLACLASRREY
LKLEKWLTDKIRDHGDVFVAACVKFLQRRCPQVMGPGIKEDPTVPKASQLPQETLTTILA
CLQVCAGSVSQECSDAIMAMVQNCSLMLNKSTMSRPPPPGVLRHRGLEPFNPATLGGQLF
SSKQVDPLGNLSTSLASMGLGSSLGPPSSSAFNLPGALGPLVSAPGSPSRLTGPSPSPFP
MLPLSSQLHSGPVGTQGPSVLPGSTIGGLGRLGPPTGIEKARIPETSTLFPDMPQNVSKE
IEDEANSYFQCIYNHPPHPTLSIDEVLDMLKKFQDSGSKREREVFNCMLRNLFEEYRFFP
QYPDKELQITAQLFGGIIERGLVNSYMTLGLALRFVLDALRKPDGSKMYYFGITALDRFK
SRLKDYQTYCEHVRNIQHFSEFPPHLIEYIEYGLQGQEPPTRPQGPVLPKTIAAMLAPVT
TPYKTITTTTITTSTTQAKPSTTPTTSLSARPSIANATNIDTLLVATDKEEKITTPPEAL
QDKTAFIFNNLSQLNLQQKCDEIREIVTEDYWPWMAQYLVMKRASIELNFHALYSNFLDC
LKLPEVNKMVTRETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILQVDI
DLKSLLVEAYHKGQQELLYVVPFVAKVLESCAKSRVFRPPNPWTMAIMNVLAELHQEPDL
KLNLKFEIEVLCKNLSIDVGELKPAVYLKDPEKLRNLDYQLSHPNKKAETGNNQQQPQAP
IEELVGPTTAGTIVAQQPPPPANTTPSLPTGPPEPRFSYMDISVTGITNISQHIAINNQL
PLFQTHPHLKQFIRPAVERAIQEWIHPVVDRSIKIALTTSEQIVRKDFALDPEEVRMRTA
ARHMVRNLTAGMAMITCRDQILTSISTNLKQAFLTAMMGTTAQQKELAEQAATVVATDNM
ELACAFVQKTAVEKAIPEMDKRLLNEIELRKIARQEGRRYCDPLAKYQAERMPEQIRLKV
GGVTPQQMAVYEEFARNIPGFLPLSERDTQALFVPKPVTETTVAPFATNSAVAVATAQQV
AAYAAAVSNDEVGAMLEKLAAEVDVLLSAMGPAAPPQHHVALHSLLESIIHTRRSRDAGA
AMTLLKKAVEGLLDGPTISSGVMDSEIILRYRELHLRILKCLQDPRAYGMQWTNKHVTRF
LTECREDFRYNFEAVDCLIRSHLISLPQYDLSLAQAMDASNAMATAFAMQLVQLYLIDER
QTTHVTESDLFHTIEILVRITHHRAPPEGIPLFRLTSLIDSLRANHDPAVLADRAPAGPT
AHIHSGILQVRARDFDDPPGLMEKTEYLLREWVTMHHNPTNSRDPTKAFGMFVHQMNIHG
ILKTDDLITRFFKLSTQMCVDLCYRALTETNAVASVVRAKCFHSLDAFVRLVALLVKHSG
DTTNTHTKINLLNKVLGIVAGVLLQDHEMRGTDFQQLPYHRIFIMLFLELCAPEPVLEAV
NYQVLTAFCHTLHILRPAKASGFCYAWLELVSHRVFIGRMLAITPQQKCWGMYAQLLIDL
FKYLAPYLRNAELAKPVTLLYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMRNL
ILSAFPRNMRLPDPFTPNLKVDMLQEIAHAPRVLTNFASMIQPLSFKKELDSYLKARAPV
TFLSELRSNLQVSQEAGVRYNIQLMNALVLYVGTQAISFIRSKGHTPNMSTIAHSAHMDI
FQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTLLYLFAEANTEAIQEQITRVLLE
RLIVNRPHPWGLLITFIELIKNPTYKFWTHEFVHCAPEIEKLFESVARSCMVQKQVQPTP
ESEIPE
NT seq
7221 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcacgaaggtgaagagtgtgaggggcggagggtcaggttacggggggaaaag
aaagcaaagaagaagaagaagaagaaaggtctaaggacctgttgttctattttggtacag
tggaaaggtctggaagcagaccgacacttgctgcgctctttgctctcatacgtcgatttc
tctactggagagccaccggaatcaagtgcgaaggattattttcaagtacagcttctaaag
caagagtgtaccaatctgctcagcaagccttctctgatttctaacttctgttttgcaata
gatcatcctttacatcaacagaagactttgaatccatcgccacagttttttttacacctg
aagaaggtactcggactgacattggtacaagaagttgcttatgctatcgtactacaacat
tcagaaaatattgatattcgtacattgtctcaagaatacgttaaaaaacaattacccgaa
ttaattaaaaattatattaattcggagacaagcaataagaatcacgaggagggattacac
gattcatcgccagaagttttgcaccttatactttcgcaggtttttcatattcctaatcaa
tttggtgtttcttctgaagctaaggaaaaatttctcaagaatttaaggcgcgattttccc
cgtgaactggtaccagtggtgctagcaccactcttgtatccaggcgacggggaaactccg
caagccaaaattgaattaaacatggctgtcaatcaaatggatggcacttcgctagtggag
ttgatcatggagttaggatatggattcactagtagcgtagaagaatgtcgatcagcgttg
gctggcctaggagccagagaaatatctccagcatgcattgctcgagttttatctcacatg
gcacgtagttgtaataatctcgatgatgccggaggcttacaatcattttggggaaattct
gcttctactcaagatgctaataaagaaaaaacatcagaaaatatccctccaaccacttgg
aatgttgaagtttttattcagactttgaaggaaacgcaatcaacaatactatggaacgaa
gttatagtgaaattggatcatgctgagtttatcatcaaagataggcagggattgaattta
ttaattatgggattgagattaggtttgcaacatcaaggatatcctccagatgtctttcct
gtagaacttttttatcgacattgggaaaatgtagagggtcaattttctttagtgcaacaa
attttgaagtgtcctgacatattttgtttcgctgattatccataccattcagttactgtt
gacgtattaaaggcagctccagaaggagatagcaaggaagcacaaacatggagatcattg
tactttgttgaattacttttacatattgctgagaggggtttgtatggaccagttcaagaa
atctttaagtggcctattcaacattgtccggacgtacttgtcttagcattactacaaatt
aatccgcctataactttacttagacaagaattgttaagtacacttatgcctatatttttt
ggaaatcatcctaattcagcagtgattttacatcatgcgtggcatgctaataatgtgaaa
atcaaatctattattatgcatgcaatggctgaatggtatatacgtggcgaccatgatcag
acaagactgtcgcgcattttagatgttgcgcaagatcttaaagcattatcagcgttgttg
aatgcacaatcatttccatttgttattgacctagcatgtctagcgtctcgacgtgaatat
ttgaaattagaaaaatggttgactgataagattagagaccatggagatgtgtttgttgct
gcttgtgttaaatttttacaaagacggtgtccacaagtaatgggccctggtattaaagaa
gatcctacagtgcccaaggcaagtcagttgccacaagaaacgcttacaacaatacttgct
tgcttgcaagtgtgtgctgggagtgtttctcaagagtgttccgacgcaataatggcaatg
gtacaaaattgcagtttaatgttaaataaaagcaccatgagtagaccaccaccgccagga
gttttaagacacagaggtttagaaccatttaatcctgcgacattaggaggacagctgttt
tcttctaagcaagtggatccacttggaaatttaagtacaagtcttgcttctatggggtta
ggatccagtctcggaccacctagtagttctgcatttaatttaccaggagcacttgggcct
ttagtttcagcacctggatctccttccagattaacaggaccatctccaagtccattccca
atgttaccattatcttcacaacttcattctggtccggttgggacacaaggcccttctgtt
ttacccggaagtacaataggagggttaggaagactcggcccaccaacgggtatagaaaaa
gcaagaattcctgaaacatccactttatttcctgatatgcctcaaaatgtatcaaaagaa
atcgaagacgaagctaatagctactttcaatgcatatacaatcatccacctcatccaacc
ttatctatcgatgaagttcttgatatgctgaaaaaatttcaagattcaggcagtaaaaga
gagagagaagtattcaattgtatgcttcgaaatttgttcgaagaatatcgtttttttcct
caatatccagataaagaacttcaaataacagcacaattatttggtgggataattgaaagg
ggtcttgtgaatagctatatgacacttggattagcattaagatttgttcttgatgctttg
agaaagccagatggtagcaaaatgtattattttggtataacagccctagatcgttttaaa
agtcgtttaaaagattatcaaacgtattgcgaacatgtgagaaacatccagcactttagt
gaatttccaccgcacttaattgagtatatagaatatggtttgcaaggacaagaacctcct
actagacctcagggtcctgttcttcctaaaacaatagctgctatgttagctccagttaca
acgccatacaagactattaccaccacaactataacaacaagtacgactcaggctaaacct
tccacgacaccaactacttcactttctgccagaccttctattgcaaatgcaactaatatc
gatacgttgctcgtggcaacggataaagaggaaaaaattacaacaccacctgaagcgtta
caagacaaaactgcatttatttttaataatcttagtcaattaaatttgcaacaaaagtgt
gatgaaattcgagaaatagtcaccgaagattattggccctggatggcacaatatttggtt
atgaaacgtgctagcattgaattaaattttcatgctttatattcgaattttttagattgt
ttaaaacttccagaagttaataaaatggtaaccagagaaacgttcagaaacattaaggta
ttattacgcagtgataaaggaatagctaatttttctgatagatctcttttaaaaaattta
ggacattggcttggaatgttaactctcggtagaaataagcctattttacaggtggacatt
gatttaaaaagtttattagttgaagcatatcacaaaggtcaacaagaacttctttatgtt
gtacctttcgttgctaaagttttggaaagttgtgcaaaaagtcgtgtttttcgtcctccc
aatccatggacaatggcgattatgaatgtattagcagaacttcatcaagagccagattta
aagttgaatttaaaatttgaaattgaagtgctttgtaaaaacttgagtattgatgttgga
gaattaaaaccagcagtttatttaaaagatccagagaaattacgcaacttggactatcaa
ttgtcgcatcctaataaaaaagcagaaacaggaaacaatcaacaacaaccgcaagctcct
atcgaagaattagttggaccaacgacagcaggaactatagttgctcaacaaccaccaccc
cctgctaacacgacaccgtctttgcctactgggccaccagaaccacgttttagttatatg
gatatatctgttacaggcattactaacatttctcaacatattgctattaataatcaatta
cctttatttcaaacgcatcctcatttaaaacagtttattcgtcctgctgttgaaagagct
atacaagaatggatacatccagtagtcgatcgatctataaaaatagctttaactactagc
gaacaaatagtaagaaaagattttgctttagatcctgaagaagtaagaatgcgaacagcg
gcacgtcatatggttcgcaatttaactgctggaatggctatgattacatgtagagatcag
attttaacgtcaataagtacaaatctgaagcaagcttttctaacagcaatgatgggtaca
actgctcagcaaaaagaattagcagagcaagctgcaactgttgtagctaccgataatatg
gaacttgcttgcgcgtttgtacaaaaaacagctgttgaaaaagcaataccagaaatggac
aaacgtttgttgaatgaaattgaattaagaaaaattgcacgacaggaaggaagaagatat
tgcgatcctttagctaaatatcaagctgaaagaatgccagaacaaattcgattaaaagtt
ggtggagtaactcctcagcaaatggctgtgtatgaagaatttgctagaaatattcctgga
tttttgccattatctgaaagagatactcaagcgcttttcgtgccaaaaccagtgacggaa
actactgtagctccgtttgctaccaattcagccgttgcagtagcaacagcacaacaagta
gctgcttacgcagctgctgtaagtaacgatgaagttggagcgatgttagaaaaactagca
gccgaggtagacgtcttgctttctgcaatgggtccagcagcaccgcctcaacatcatgta
gcacttcatagtcttttagaatctattattcatactagaagatcaagagatgcaggtgct
gcaatgacgcttctgaaaaaagcagtcgaaggattgctggatggtcctactatatctagt
ggagtgatggattcagaaataatcctacgttatagagaacttcatttacgtattctgaaa
tgtcttcaagatccacgtgcttatggtatgcagtggacaaacaaacacgtcactcgtttc
ttaacggaatgtagagaagattttcgttataactttgaagcagtggattgtttgataaga
tctcatttgatcagtcttccacagtatgatttatctctagcgcaagctatggatgctagt
aatgctatggcaactgcatttgctatgcagttggttcagctataccttattgatgagaga
caaacgacacatgtaacagaatctgatctgtttcacacgattgaaatacttgtgagaatt
acacatcatagagctccaccagaaggaattccactctttagacttaccagtctaatagat
tccttacgtgcaaatcatgaccctgcagtactagccgatcgtgcacctgcaggaccgaca
gcacatatccattctggaattctccaggtgagagcccgtgattttgatgatccgccagga
ttaatggagaaaactgaatatttattacgtgaatgggttacaatgcatcataatcctact
aattctcgtgatcctactaaagcatttggaatgttcgttcatcaaatgaatatccatgga
attttaaaaactgatgacctcataactagattttttaaattaagcactcaaatgtgcgtg
gacctttgttatcgtgcattaactgaaaccaatgcggttgcttcagttgttcgcgcgaaa
tgttttcactcgttagacgcttttgtgcgcttagttgcactattggtaaaacattctggt
gatacaacaaatactcatacgaaaatcaatttattaaacaaagtacttggaatagttgct
ggagtattattgcaagatcacgaaatgcgtggaacagatttccaacaattaccataccat
agaattttcatcatgctcttcttagagctttgtgctcctgaacctgtattagaagcagtc
aattaccaagttttgacagccttctgtcatacgttacacatattaagacctgccaaagct
tcaggcttttgttatgcctggttggaactcgtttcccacagggttttcattggacgtatg
ctagctattactccccaacaaaaatgttggggaatgtatgctcaacttctgatcgactta
ttcaaatatcttgctccttatctgcgcaacgcagaacttgcaaaacccgtaacgcttctg
tacaaaggtactcttcgagtattactcgtattacttcacgattttccagagttcctttgc
gattatcattatggattttgtgacgtaattccacccaattgtatacaaatgagaaatctt
atattaagcgcattcccaagaaatatgcgcttgcctgatccatttactcccaatttaaaa
gttgatatgcttcaagaaattgcccatgctccaagagtgctaactaattttgcttccatg
attcaaccactcagttttaaaaaggaattagattcttatttgaaagctcgtgcaccagtt
acattcttgtcagaattacgcagcaatctacaagtatctcaggaagctggtgtaagatat
aacattcagttgatgaatgctttagttctttatgttggaacccaagcaatttccttcata
cgtagtaaaggccatacacctaacatgtctacaatcgcgcattctgcgcacatggacata
ttccaaaatcttgctgtcgatcttgataccgaaggtcgttacttatttttaaatgctatt
gctaatcagcttcgctatcccaatagccatacacattatttcagttgtacgctactttat
ttatttgctgaagccaatactgaagcaatacaggaacaaattacgagggtccttctcgaa
agactcattgtcaacagacctcatccttggggccttcttattacattcatcgaactcatt
aagaatcctacatacaaattctggacgcacgaatttgttcattgcgctccagaaatagaa
aagttgttcgaatcagtagctcgatcatgtatggttcaaaaacaagtgcagcctacaccc
gaatcagaaattccggagtga
DBGET
integrated database retrieval system
