Prevotella fusca: ADJ77_02535
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Entry
ADJ77_02535 CDS
T04032
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pfus
Prevotella fusca
Pathway
pfus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ADJ77_02535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfus03019
]
ADJ77_02535
Messenger RNA biogenesis [BR:
pfus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ADJ77_02535
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GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_KhpA-B
KH_2
DUF4954
KH-I_KHDC4-BBP
ARA70
Motif
Other DBs
NCBI-ProteinID:
AKU68731
UniProt:
A0A0K1NJ68
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Position
1:629955..631496
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AA seq
513 aa
AA seq
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MSPIVTVAIAVLCLAAGCAGGFAIFRYILTGKYKDTMEKAEKAAEVIKEKKLLEVKEKFL
NKKSELEKEVQQRTLKIQQGENRLKQREVALNQRQEDINRRKQDVDQQQQRVDNEKKLLQ
IKQQDLEKMQEQERMKLEELSGLSSEEAKKRLIESLKDQAKLDAASYINEIVDEAKLNAN
QQAKRIVIQTIQRVATETAIENSVSVFHIDSDEVKGRIIGREGRNIRALEAATGVEIVVD
DTPEAIVISAFDPVRREVCRLALHQLVADGRIHPARIEEIVAKVKKQLDNEIIETGKRTA
IDLGIHGLHPELIRIVGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLL
HDIGKVPDEETDLPHALYGGKIAEKFKEKPDICNAIAAHHDEIEMTTLLAPIVQVCDAIS
GARPGARREIVEAYIKRLNDLEAIAMSYPGVTKTYAIQAGRELRVIVGADKMDDAESEKL
SSEIAEKIQNEMTYPGQVKITVIREIRSVAYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagtccaatagtaacagttgcaatagctgtgttatgccttgcggcaggttgtgctggt
ggatttgctattttccgttatatcttgacaggaaagtacaaagacacaatggaaaaagca
gagaaagctgcagaggttatcaaagaaaagaaacttctggaggtaaaggagaaatttctt
aataaaaagagtgagctcgagaaagaggttcaacagcgtacattgaagatacagcagggt
gagaaccgactgaagcaacgtgaagttgctctgaatcaacgtcaggaagacattaaccgt
cgtaagcaggatgttgatcagcagcagcagcgtgttgataatgagaagaagttactgcag
attaagcagcaggatcttgagaagatgcaggagcaggagagaatgaaactcgaggagctc
tctggtcttagttctgaagaagcaaagaagagattgattgagagtctgaaggatcaggca
aaacttgatgcagcttcttatatcaatgaaattgtcgacgaagcaaagttgaatgccaat
cagcaggctaaaaggatagtcatccagactattcagcgtgttgctaccgagactgctatt
gagaactctgtaagtgttttccatattgacagcgatgaggtaaagggacgtatcattggt
cgtgagggtcgtaacattcgtgccttggaggcagcaacaggtgttgaaattgttgttgat
gatacgccggaagccattgttatttcagcttttgaccctgttcgtcgtgaggtctgccgt
ttggcacttcaccagttggttgctgacgggcgtattcatcctgcacgtattgaggagatt
gttgcaaaggttaagaaacagcttgataatgaaatcattgaaacaggtaagcgtacagct
attgatctcggcatccatggtttgcatccagagcttatccgtatcgtaggtaagatgaag
tatcgttcttcttatggtcagaatctcctgcagcatgctcgtgaaactgcaaatctctgt
gctgtcatggcaagcgaattaggcttgaacccaaagaaggcaaagcgtgccggattgtta
catgatataggtaaggtgccagatgaggaaaccgacttgccacatgcactttatggtggc
aagattgctgagaagttcaaggagaagccagacatctgtaatgcaattgcagctcaccat
gatgagattgagatgacaacacttcttgcaccaatagtacaggtttgtgatgctatttcc
ggtgctcgtcctggtgcccgtcgcgagatagttgaggcgtatatcaagcgtctgaacgat
cttgaagcaattgcaatgagttatccaggcgtaactaagacctatgctatccaggctggt
cgtgagcttcgtgtcattgttggtgcagataagatggatgatgcagagagcgagaaactt
agttcagagatagctgagaagatacagaatgaaatgacttatccaggtcaggttaagatt
acagtaatacgtgagattcgttctgttgcttatgcaaaataa
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