Prevotella fusca: ADJ77_04875
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Entry
ADJ77_04875 CDS
T04032
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pfus
Prevotella fusca
Pathway
pfus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ADJ77_04875 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfus03021
]
ADJ77_04875 (rpoB)
03400 DNA repair and recombination proteins [BR:
pfus03400
]
ADJ77_04875 (rpoB)
Enzymes [BR:
pfus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ADJ77_04875 (rpoB)
Transcription machinery [BR:
pfus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ADJ77_04875 (rpoB)
DNA repair and recombination proteins [BR:
pfus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ADJ77_04875 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
T4_y05I_C
Motif
Other DBs
NCBI-ProteinID:
AKU69159
UniProt:
A0A0K1NJA5
LinkDB
All DBs
Position
1:complement(1164179..1167988)
Genome browser
AA seq
1269 aa
AA seq
DB search
MALENKPRVNFASVKSPYPYPDFLDVQLKSFRDFLQLDTPPEERKNDGLYKVFAENFPIT
DTRNNFVLEFLDYYVDPPRYTIDECLERGLTYSVPLKAKMKLYCTDPDHEDFGTFIQDVF
LGTIPYMTSNGTFVINGAERVVVSQLHRSPGVFFGQGVHANGTVLYSARIIPFKGSWIEF
ATDINNVMYAYIDRKKKLPVTTMLRAIGYESDRDILQIFDLCEEVKVNKKNMKAAIGRKI
AGNVMKSWTEDFVDEDTGEVVSIERNEVVVERETVITEENVDEILDSSVSTILLHKDEEA
ASKYSIIFNTLAKDPSHSEIEAVNYIYRQLRNADAADDASAREVFQNLFFSDKRYDLGEV
GRYRINKKLNLDTDMDVRVLTKDDIIEIIKYLISLINSNATVDDIDHLSNRRVRTVGEQL
ANQFSIGLARMNRTIRERMNVRDSEVFQPTDLINAKTISSVINSFFGTNPLSQFMDQTNP
LAEVTHKRRLSALGPGGLSRERAGFEVRDVHYTHYGRLCPIESPEGPNIGLISSLCMYAK
INDLGFIVTPYRRVSDAKVDMDNKDVLFLTAEEEEDQIIGQGNAPLNADGTFIRNFVKCR
QDADYPVVAPDSVALIDVSPQQIASVSAGLIPFLEHDDGHRALMGCNMMRQAVPLLHNDA
PIVGTGLEKQVCEDSRTMITAEGEGVIEYVDATTIRILYDRTEDEEFVSFEPALKEYRIP
KFRRTNQNMVVDLRPICEKGQRVKKGDILTEGYATENGELALGRNLVVAYMPWKGYNYED
AIVISERMVREDVLTSVHVDEYSLEVRETKRGVEEFTADIPNVSEEATKDLDDNGIIRIG
ARVEPGDIMIGKISPKGESDPSPEEKLLRAIFGDKAGDVKDSSLKANPSLSGVVIDKKLF
SRAIKTRESKRLDKVTLAKIDEEQEAKINDLKELLVDKLLELTEDKVSEGVKDYSDAEII
TRGSKFTVAALMNLDYEGIQSNGWTDDEHTNFLIQKLIMNYIRKYKQMDAELKRKKFAIT
IGDELPSGVLQMAKVYIAKKRKIQVGDKLAGRHGNKGIVSKVVRTEDMPFLEDGSPVDLV
LNPMGVPSRMNLGQIFEAILGAAGHKLGVKFATPIFDGAKLSDLKEWTDKAGLPNLCSTY
IYDGETGEKFDQPATVGITYFLKLGHMVEDKMHARSIGPYSLITQQPLGGKAQFGGQRFG
EMEVWAIEAFGASHVLQEILTIKSDDVVGRSKAYEAIVKGEPMPTPGIPESLNVLLHELR
GLGLSIKLD
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggcattagaaaataaacccagagtaaatttcgccagcgttaagagtccgtacccatat
ccggatttcctcgatgtgcagttgaagtctttccgtgacttcttacagctggatactccg
cctgaggaacgcaagaatgatggtttgtataaggtgtttgcagagaacttccctatcacc
gatacgcgtaataatttcgtccttgagttcttggattactatgttgacccaccaagatac
actattgatgagtgtttggaacgtggcttgacatacagtgtacctttgaaggcaaagatg
aagctgtattgtactgatcctgatcatgaggacttcggtacatttattcaggatgtattc
ctgggaacaattccttacatgaccagtaatggtacttttgtgatcaatggtgctgagcgt
gttgtggtttctcagttgcatcgttctccgggtgtgttcttcggtcagggtgtccatgct
aatggtactgttctctacagtgcacgaattatcccgtttaagggttcatggattgagttt
gctactgacatcaataatgtcatgtatgcttatattgaccgtaagaagaagctgcctgta
accactatgcttcgtgctattggttatgagtctgatcgtgacatccttcagatatttgat
ctctgtgaggaggtgaaggtcaacaagaagaatatgaaggcagctatcggtcgtaagatt
gctggtaatgtgatgaagtcttggactgaagactttgttgatgaggataccggtgaggtc
gtttctatcgagcgtaacgaggttgttgttgagcgtgagactgtcatcacagaagagaat
gttgatgagattcttgacagctctgtttctacaatcctgctccataaggatgaagaggct
gcgagcaagtactctatcattttcaatacacttgccaaagacccgagccactcggagatt
gaggcagtaaactatatttatcgtcagttgcgtaatgctgatgctgctgatgatgcaagt
gcacgtgaggtattccagaacctcttcttctcagacaaacgttatgatttgggtgaagta
ggtcgttatcgtatcaacaagaagttgaatttggatacggatatggatgtacgtgtactg
acaaaggacgatatcattgagattatcaagtatcttatcagccttatcaattcaaatgca
acggttgatgatattgaccacctgtcaaaccgtcgtgttcgtactgtaggtgagcagctg
gctaatcagttctctatcggtcttgcacgtatgaatcgtacaatccgtgagcgtatgaac
gttcgtgacagcgaagtgttccagccaacggatctgattaatgcaaagaccatctcaagt
gtcatcaactcattctttggcactaatccattgagtcagttcatggatcagaccaacccg
ttggctgaggtaactcacaaacgtcgtctttcggcgcttggtcctggtggtctgtctcgt
gagcgtgcaggttttgaggtgcgtgacgttcactatacccactacggccgtctttgtcct
attgagtctcctgaaggtcctaacatcggtttgatttcttcactttgtatgtatgcaaag
atcaatgatcttggtttcatcgtgacaccataccgtcgtgtgagcgatgctaaggttgat
atggacaacaaggatgttctgttcttgacagcagaggaggaagaggatcagattatcgga
cagggtaatgcaccattgaatgctgatggtacatttattcgcaattttgttaagtgtcgt
caggatgcagactaccctgttgttgctccagattcagtagctctcattgacgtttcaccg
caacagattgcttctgtatcagcaggtctgattccattcttggagcatgatgacggtcac
cgtgcgttgatgggatgtaacatgatgcgtcaggctgttccattgcttcacaatgatgct
cctatcgttggtactggtcttgagaagcaggtgtgtgaggattcacgtacgatgattact
gcagaaggcgaaggtgtaatcgagtatgttgacgctacaaccatccgtatcctctatgat
cgtacagaggacgaggagtttgtaagtttcgagcctgccttgaaggaatatcgtattcct
aagttccgtcgcaccaaccagaatatggttgttgacctccgtcctatttgcgagaagggt
cagcgtgtgaagaagggtgatattcttacagagggttatgctacagagaacggtgagttg
gcattgggtcgaaaccttgttgttgcttatatgccttggaaaggttacaactatgaggat
gctattgttatctctgagcgtatggtccgtgaggacgtattgacctcagttcacgttgac
gagtattctcttgaagttcgtgaaaccaagcgtggtgttgaggagttcactgcagacatc
cctaacgtaagtgaggaagctactaaggatcttgacgataatggtattatccgtatcggt
gctcgtgttgagcctggcgatatcatgattggtaagatttcgcctaagggcgagagtgat
ccttcaccagaggagaaacttctccgtgcaatcttcggtgacaaggctggtgacgtgaag
gattcttcactgaaggcaaatccttcattaagtggtgttgttatcgataagaagctcttt
agccgtgccatcaagacacgtgaaagcaagcgactggacaaagttacacttgccaagatt
gatgaagagcaggaggctaagatcaacgatttgaaggagctgttggttgacaagttgctt
gagttgacagaagataaagtctcagagggtgtcaaggactactctgatgcagagattatc
accaggggcagcaagtttaccgttgcagcgttgatgaacctcgactatgagggcatccaa
tcaaatggctggacagatgatgagcataccaattttcttatccagaagttgattatgaac
tacatccgcaagtacaagcagatggatgctgaactgaagcgtaagaagtttgccatcact
atcggtgatgaacttccttcgggtgttcttcagatggcaaaggtttacattgccaagaaa
cgtaagattcaggtaggtgataaacttgctggtcgtcacggtaacaagggtatcgtttca
aaggttgtacgtacagaggatatgccgttcctggaggatggtagtcctgtagacttggtg
ctgaacccaatgggtgtgccttcacgtatgaaccttggtcagattttcgaggctatcctc
ggtgccgcaggtcacaagttgggtgttaagtttgcaactcctatcttcgatggtgccaaa
ctttctgacctgaaggagtggacggacaaggctggtctgccaaatctctgttcaacctac
atctatgatggtgagacaggtgagaagttcgatcagccagctacagtgggtatcacttac
ttcttgaaacttggtcacatggttgaagataagatgcacgctcgtagcattggtccgtac
tcattgattacccagcagccacttggtggcaaggcacaatttggtggtcagcgtttcgga
gagatggaggtctgggctattgaggctttcggagcatctcatgttcttcaggaaatcttg
acaattaagtctgatgacgttgttggtcgttcaaaggcttacgaggctatcgttaagggt
gagccaatgccaactccaggtattccagagtcactgaacgtgctgttgcatgaacttcgt
ggtctcggtctgagcatcaaacttgattaa
DBGET
integrated database retrieval system
