Pseudomonas furukawaii: KF707C_55740
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Entry
KF707C_55740 CDS
T07047
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pfuw
Pseudomonas furukawaii
Pathway
pfuw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfuw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KF707C_55740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfuw03400
]
KF707C_55740
Enzymes [BR:
pfuw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KF707C_55740
DNA repair and recombination proteins [BR:
pfuw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KF707C_55740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BAU77262
LinkDB
All DBs
Position
6055979..6056758
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AA seq
259 aa
AA seq
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MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYAGDA
EVPSQGGVALYSRLQPKAVIWGLGFESCDRYGRYLQADFDKVSIATLLLPSGQGGDENLN
HKFKFMDDLAHYLNKQRRKRREYIYCGSLYVAHQKLDVKNWRDCQQLPGFLAPERAWMDE
VFGNMGYVDALREVSREGDQFSWWPDSEQAEMLNLGWRFDYQVLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWLLSV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtgaatggtattcaagccgccgccgaacgaggtctcctc
agttggctgcaggctcagaatgccgacgtgatctgcctgcaagacacacgtgcctcagcc
ttcgaactggacgaccctgccttccaactggatggttatttcctctacgccggcgatgcc
gaagtaccctcccaaggtggagtggcgctctattcgcggttgcagcccaaggcggtgatc
tggggactcggcttcgagtcctgcgataggtacggacgttacctgcaggcggatttcgac
aaagtgagcatcgccaccctgctgctgccttccgggcaaggcggggacgagaacctgaac
cacaagttcaagttcatggacgatctcgcccattatctgaacaagcagcgccgcaagcgc
cgcgagtacatctactgcggctcgctctacgtcgcccatcagaagctggatgtgaagaac
tggcgcgactgccagcaactccccggattcctggcgccggagcgtgcctggatggacgaa
gtgttcggcaacatgggctatgtggatgcattgcgcgaagtcagccgcgaaggcgaccag
ttcagctggtggccggacagcgagcaggccgagatgctcaacctcggctggcgcttcgac
taccaggtactcacgcccggcctgcgccgcttcgtgcgcagcgcacgcctgccgcgccag
ccgcgcttctcccagcatgcgccgctgatcgtggactacgactggttgctgagcgtttga
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