KEGG   Pseudomonas simiae PCL1751: PF1751_v1c04880
Entry
PF1751_v1c04880   CDS       T03766                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pfw  Pseudomonas simiae PCL1751
Pathway
pfw02024  Quorum sensing
pfw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pfw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PF1751_v1c04880 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PF1751_v1c04880 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfw03019]
    PF1751_v1c04880 (hfq)
   03036 Chromosome and associated proteins [BR:pfw03036]
    PF1751_v1c04880 (hfq)
Messenger RNA biogenesis [BR:pfw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     PF1751_v1c04880 (hfq)
Chromosome and associated proteins [BR:pfw03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    PF1751_v1c04880 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AJP50195
UniProt: A0A370XT31
LinkDB
Position
570503..570763
AA seq 86 aa
MSKGHSLQDPYLNTLRKEKVGVSIYLVNGIKLQGTIESFDQFVILLKNTVSQMVYKHAIS
TVVPVRPIRLPSAAGDDAADAEPGNA
NT seq 261 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcattcgctacaagacccttacttgaatactttacgtaaagagaaagtg
ggggtttccatctacctggtcaacggtatcaagctgcagggcacgatcgagtcgttcgac
cagttcgtgatcctgctgaagaacaccgtcagccagatggtctacaagcacgctatctcg
acagtcgttccagttcgtccaatccgtctgcctagcgcagcaggtgatgatgcagctgac
gctgagccaggtaacgcctga

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