Pseudomonas simiae PCL1751: PF1751_v1c49230
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Entry
PF1751_v1c49230 CDS
T03766
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PF1751_v1c49230 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfw03400
]
PF1751_v1c49230 (uvrA)
DNA repair and recombination proteins [BR:
pfw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PF1751_v1c49230 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PF1751_v1c49230 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_16
AAA_29
BCA_ABC_TP_C
AAA_23
RsgA_GTPase
AAA_33
DnaJ_CXXCXGXG
Viral_helicase1
nSTAND3
APS_kinase
cobW
Zn-ribbon_8
AAA_21
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AJP54616
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All DBs
Position
5464762..5467596
Genome browser
AA seq
944 aa
AA seq
DB search
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGIPRC
PDHDIPLEAQTVSQMVDLVLAQPEGAKLMLLAPVIRERKGEHLSVFEELRAQGFVRARIN
GKLYELDEAPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE
PGEEIIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLVNGDMT
LAEGAIRGWDRRNVYYFQMLGSLASHYKFSLEVPFNQLPADQQKVILHGSGSQNVDFKYL
NDRGDIVKRSHPFEGIVPNLERRYRETESASVREELAKFLSTQPCPDCRGTRLRREARHV
WVGEKTLPAVTNLPIGDACEYFGVLKLTGRRGEIADKILKEIRERLQFLVNVGLDYLSLD
RSADTLSGGEAQRIRLASQIGAGLVGVLYILDEPSIGLHQRDNDRLLGTLKHLRDIGNTV
IVVEHDEDAIRLADYVVDIGPGAGVHGGHIVAEGTPAEVMAHPDSLTGKYLSGRVKIEVP
AKRTPRNKKLALHLKGARGNNLRNVDLEIPIGLLTCVTGVSGSGKSTLINNTLFPLSATA
LNGATTLEAAAHDSIKGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKYK
GKSIHETLEMTIEEARVFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGQIIAVGTPEQVSEMPQSHTGYYLKPLLERDRA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
ttggacaagatcctgattcgtggggctagaacccacaacctgaagaacatcgacctgacc
ctgccccgggacaaactgatcgtcatcaccggtttgtccgggtccggcaaatcgtccctg
gcgttcgacacgctgtatgccgaaggccagcgtcgctatgtggaatcgctgtcggcctat
gcccgccagttcctgtcgatgatggaaaagcccgacgtcgacaccattgaaggcctgtcg
ccggcgatctccatcgaacagaagtcgacctcccataacccgcgctccaccgtgggcacc
atcaccgaaatctacgactacctgcgcctgctgtatgcacgtgtgggtattccgcgttgc
ccggaccacgacattcccctggaagcccagaccgtcagccagatggtcgacctggtgctg
gcccagccggaaggcgccaagctgatgctgctggcaccggtgatccgtgagcgcaagggt
gaacacctttccgtcttcgaagagctgcgggcgcaaggttttgtacgtgcacgcatcaac
ggcaagctctatgagctggacgaggcgccgaagctcgacaagcagaagaagcactcgatc
gatgtggtcgttgaccgtttcaaagtgcgcgccgatctgcagcagcgcctggcggaatcc
ttcgaaaccgcgttgaagctggccgacggcattgcactcgtggcgccgatggacgacgag
ccgggcgaagagatcatcttctccgcgcgctttgcctgcccgatctgcggccacgccatc
agcgagcttgaacccaagctgttctccttcaacaacccggccggcgcctgcccgacctgt
gatggcctgggggtgaagcagttcttcgacatcaagcgcctggtcaacggtgacatgacg
ctggcggagggggcgatacgcggctgggatcggcgcaacgtttactacttccagatgctg
gggtcgttggcgtcgcattacaaattcagcctggaggtaccgttcaaccaactgccggcg
gaccagcagaaggtcatcttgcacggcagtggttcgcagaacgtcgacttcaagtacctg
aacgaccgtggcgatatcgtcaagcgctcgcacccgttcgaaggtatcgtgccgaacctg
gagcgtcgctaccgcgagacagaatcggccagcgtgcgcgaagaactggcgaaattcctc
agcacacaaccttgcccggattgccgcggcactcgcctgcgtcgtgaggcgcggcatgtg
tgggtgggcgagaaaacattgccggcggtgaccaacctgccgatcggtgatgcctgcgaa
tactttggcgtactcaagctgaccggccgccgtggagaaatcgccgacaagatcctcaag
gagattcgcgagcggttgcagttcctggtcaacgttggcctggattacctctctctggac
cgcagcgccgataccttgtccggcggtgaagcacagcgcatccgcctggccagccagatc
ggcgccggccttgtgggtgtgttgtacatcctcgacgaaccgtcgattggcctgcaccag
cgcgacaacgatcgcctgctgggtacgttgaaacacctgcgggatatcggcaacacggtg
attgtggtcgaacacgatgaagacgcgattcgcctggcggattacgtggttgatatcggc
ccgggcgccggtgtgcatggcggacatattgtcgctgaaggcaccccggccgaagtcatg
gctcacccggactcgctgaccggcaaatacttgtctggccgcgtcaagatcgaagtgccg
gccaaacgcacaccgcgtaacaagaagctggcgctgcacctcaagggcgcacgcggtaac
aacttgcgcaatgtcgacttggaaattccaattggtttgctgacatgcgtgaccggtgtt
tccggctcaggtaaatcgacgctcataaacaacacgttgtttcccttgagtgccactgcc
ctgaacggcgcgaccaccttggaagcggcggcgcacgacagcatcaaaggcctggaacac
ctggataaggtggtcgacatcgaccaaagcccgattggccggacgccacgttccaacccg
gcgacctacaccggtttgttcacgcccattcgtgaactgtttgccggtgttccggaatcc
cgctcacggggttacgggccgggtcggttctcgttcaacgtcaagggcggacgctgcgaa
gcgtgccagggcgacggcttgatcaaggtggaaatgcacttcctgccggacatctacgtg
ccgtgcgatgtgtgcaaaagcaagcgctacaaccgcgagaccctggagatcaagtacaag
ggcaagagcatccacgaaaccctggagatgaccatcgaggaagcgcgggtgttcttcgac
gcagttccggcgttggcgcgcaaactgcagacgctgatggacgtgggtttgtcgtatatc
aagctgggtcagtcggcgaccacgctgtcaggtggtgaggcgcagcgggtgaagttgtct
cgcgagctgtcaaaacgcgataccggcaagaccctgtatatcctcgatgagccgaccacg
ggcctgcacttcgcggatatacagcaattgctggacgtgctgcaccgcctgcgcgaccac
ggcaacaccgtggtggtaatcgagcacaaccttgatgtgatcaagacggccgattggctg
gtggacctggggccggaaggcggttccaagggtggccagatcattgccgtaggcacgccg
gagcaggtctccgaaatgccgcagtcgcataccggttactacctgaagccgttgctggaa
cgcgaccgggcctga
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