Pseudomonas lurida: A7318_02445
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Entry
A7318_02445 CDS
T04730
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
pfx
Pseudomonas lurida
Pathway
pfx02024
Quorum sensing
pfx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7318_02445
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A7318_02445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfx03019
]
A7318_02445
03036 Chromosome and associated proteins [BR:
pfx03036
]
A7318_02445
Messenger RNA biogenesis [BR:
pfx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A7318_02445
Chromosome and associated proteins [BR:
pfx03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
A7318_02445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AOE77476
UniProt:
A0A5E6MZX8
LinkDB
All DBs
Position
complement(589468..589728)
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AA seq
86 aa
AA seq
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MSKGHSLQDPYLNTLRKEKVGVSIYLVNGIKLQGTIESFDQFVILLKNTVSQMVYKHAIS
TVVPVRPIRLPSAAGDDVADAEPGNA
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagggcattcgctacaagacccttacttgaatactttacgtaaagagaaagtg
ggggtttccatctacctggtcaacggtatcaagctgcaaggcacgatcgagtcgttcgac
cagttcgtgatcctgctgaaaaacaccgtcagccagatggtctacaagcacgctatctcg
acagtcgttccagttcgtccaatccgtctgcctagcgcagcgggtgatgatgtagctgac
gctgagccaggtaacgcctga
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