KEGG   Pseudomonas lurida: A7318_27060
Entry
A7318_27060       CDS       T04730                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pfx  Pseudomonas lurida
Pathway
pfx03420  Nucleotide excision repair
pfx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A7318_27060
   03430 Mismatch repair
    A7318_27060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfx03400]
    A7318_27060
Enzymes [BR:pfx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A7318_27060
DNA repair and recombination proteins [BR:pfx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A7318_27060
   MMR (mismatch excision repair)
    Other MMR factors
     A7318_27060
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 PcrA_UvrD_tudor AAA_11 AAA_22 DUF1175
Other DBs
NCBI-ProteinID: AOE82123
LinkDB
Position
5963598..5965781
AA seq 727 aa
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACVRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI
GEKTVEAIRDHARHADVSMWEAMRLLIANKGLTGRAAGALGVFVELIENLAAKCAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQNSSSMFAGSEIPETQFSLGQQVRHSVFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAI
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgcgcgatgatctctcccttctgctgaactccctcaacgatgcccaacgccaggccgta
gcggcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgcatcgcctggttgatccaggtcgaaaacgcgtccccccattcaatcctg
tcggtgacgttcaccaacaaggctgcggccgagatgcgccaccgcatcgaacagctcatg
ggcatcagcccggccggtatgtgggtgggcaccttccacggcctggcgcaccgcctgttg
cgagcgcactggcaggaagcgggcctgagccagaccttccagattctcgacagcgatgac
cagcaacgcctggtcaagcgggtgatccgcgagctgggcctggacgaacagcggtggccg
gcgcgccaggcgcaatggttcatcaatggccagaaagacgaaggcctgcgcccacaacat
atccaggccagcggcgatttgttcctggccaccatgcgcagcatttatgaagcctacgag
gcggcctgcgtgcgcgccggggtcatcgacttctccgagctgctgctgcgcgccctcgac
ctgtggcgtgacaatcctggcttgctggcccattaccagaaacgcttccggcatatcctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcctgctggccaaa
ggtggcgacagcctgatggtggtgggcgacgatgaccagtcgatctacggctggcgtggc
gcgaaaatcgagaacatctaccagtattccgaagacttcccggacgcggtcaccatccgc
ctggagcagaactaccgctccaccgccgggatcctcaaggctgccaacgccttgatcgcc
aataacaccgggcgcctgggcaaagagctgtggaccgacggcggcgaaggcgaagccatc
aacctgtacgccgcgttcaacgagcacgatgaagcgcgctatgtggtggaaaccatcgaa
agtgcgctgaaaaccggtctggcgcgcagcgacatcgccatcctgtaccgttccaacgcc
caatcgcgggtattggaagaagccttgctgcgcgaacgtattccgtaccgcatctatggc
ggccagcgcttcttcgaacgtgccgaaatcaagaacgccatggcttacctgcgcctgctg
gaaggccgtggcaacgatgcggcgctggagcgggtgatcaacatcccggcacggggcatc
ggcgagaaaaccgtcgaagccattcgcgaccacgcgcgccacgccgatgtgtcgatgtgg
gaagccatgcgcttgctgatcgccaataaaggcctgaccggccgtgcagccggtgcgttg
ggtgtgtttgtcgagctgatcgagaacctggccgccaagtgcgcggaaatgcccctgcac
ctgatgacccagaccgtgatcgaacagtcggggctgatcgcctaccacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgctgctcgtgcg
ttcgagaacaccgaggaagacgaagaactcaccccgctcgccgcattcctcggccatgcg
tcgctggaagccggggatacccaggccgacgagcacgaagacagcatccaactgatgacc
ttgcacagcgccaagggcctggagttcccgtacgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagagcccggccgtcttgaggaagagcgccgcctg
gcctacgtgggcatcacccgcgcgatgcagaacctggtgatgacctacgcagaaacccga
cgcctgtacggcagcgagacctacaacaaggtatcgcgcttcgtacgtgaagtgccgaag
gggctgatccaggaagtgcgcctgtccaacagcgtcagccgcccgttcggcgggggccag
cagcagaactccagcagcatgtttgccggttcagagattccggaaacccaattcagcctt
ggccagcaggtcaggcactctgtgttcggcgaaggcgtgatcctcaatttcgaaggggcc
ggcgcccaggcgcgggtgcaggtgaatttcgccgaaggcagcaagtggctgatgatgggt
tacgcgaagcttgaagccatctga

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