Pseudomonas lurida: A7318_27060
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Entry
A7318_27060 CDS
T04730
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfx
Pseudomonas lurida
Pathway
pfx03420
Nucleotide excision repair
pfx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A7318_27060
03430 Mismatch repair
A7318_27060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfx03400
]
A7318_27060
Enzymes [BR:
pfx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A7318_27060
DNA repair and recombination proteins [BR:
pfx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A7318_27060
MMR (mismatch excision repair)
Other MMR factors
A7318_27060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
DUF1175
Motif
Other DBs
NCBI-ProteinID:
AOE82123
LinkDB
All DBs
Position
5963598..5965781
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACVRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI
GEKTVEAIRDHARHADVSMWEAMRLLIANKGLTGRAAGALGVFVELIENLAAKCAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQNSSSMFAGSEIPETQFSLGQQVRHSVFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttctgctgaactccctcaacgatgcccaacgccaggccgta
gcggcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgcatcgcctggttgatccaggtcgaaaacgcgtccccccattcaatcctg
tcggtgacgttcaccaacaaggctgcggccgagatgcgccaccgcatcgaacagctcatg
ggcatcagcccggccggtatgtgggtgggcaccttccacggcctggcgcaccgcctgttg
cgagcgcactggcaggaagcgggcctgagccagaccttccagattctcgacagcgatgac
cagcaacgcctggtcaagcgggtgatccgcgagctgggcctggacgaacagcggtggccg
gcgcgccaggcgcaatggttcatcaatggccagaaagacgaaggcctgcgcccacaacat
atccaggccagcggcgatttgttcctggccaccatgcgcagcatttatgaagcctacgag
gcggcctgcgtgcgcgccggggtcatcgacttctccgagctgctgctgcgcgccctcgac
ctgtggcgtgacaatcctggcttgctggcccattaccagaaacgcttccggcatatcctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcctgctggccaaa
ggtggcgacagcctgatggtggtgggcgacgatgaccagtcgatctacggctggcgtggc
gcgaaaatcgagaacatctaccagtattccgaagacttcccggacgcggtcaccatccgc
ctggagcagaactaccgctccaccgccgggatcctcaaggctgccaacgccttgatcgcc
aataacaccgggcgcctgggcaaagagctgtggaccgacggcggcgaaggcgaagccatc
aacctgtacgccgcgttcaacgagcacgatgaagcgcgctatgtggtggaaaccatcgaa
agtgcgctgaaaaccggtctggcgcgcagcgacatcgccatcctgtaccgttccaacgcc
caatcgcgggtattggaagaagccttgctgcgcgaacgtattccgtaccgcatctatggc
ggccagcgcttcttcgaacgtgccgaaatcaagaacgccatggcttacctgcgcctgctg
gaaggccgtggcaacgatgcggcgctggagcgggtgatcaacatcccggcacggggcatc
ggcgagaaaaccgtcgaagccattcgcgaccacgcgcgccacgccgatgtgtcgatgtgg
gaagccatgcgcttgctgatcgccaataaaggcctgaccggccgtgcagccggtgcgttg
ggtgtgtttgtcgagctgatcgagaacctggccgccaagtgcgcggaaatgcccctgcac
ctgatgacccagaccgtgatcgaacagtcggggctgatcgcctaccacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgctgctcgtgcg
ttcgagaacaccgaggaagacgaagaactcaccccgctcgccgcattcctcggccatgcg
tcgctggaagccggggatacccaggccgacgagcacgaagacagcatccaactgatgacc
ttgcacagcgccaagggcctggagttcccgtacgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagagcccggccgtcttgaggaagagcgccgcctg
gcctacgtgggcatcacccgcgcgatgcagaacctggtgatgacctacgcagaaacccga
cgcctgtacggcagcgagacctacaacaaggtatcgcgcttcgtacgtgaagtgccgaag
gggctgatccaggaagtgcgcctgtccaacagcgtcagccgcccgttcggcgggggccag
cagcagaactccagcagcatgtttgccggttcagagattccggaaacccaattcagcctt
ggccagcaggtcaggcactctgtgttcggcgaaggcgtgatcctcaatttcgaaggggcc
ggcgcccaggcgcgggtgcaggtgaatttcgccgaaggcagcaagtggctgatgatgggt
tacgcgaagcttgaagccatctga
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