Pestalotiopsis fici: PFICI_00571
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Entry
PFICI_00571 CDS
T04924
Name
(RefSeq) Replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03030
DNA replication
pfy03410
Base excision repair
pfy03420
Nucleotide excision repair
pfy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFICI_00571
03410 Base excision repair
PFICI_00571
03420 Nucleotide excision repair
PFICI_00571
03430 Mismatch repair
PFICI_00571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfy03032
]
PFICI_00571
03036 Chromosome and associated proteins [BR:
pfy03036
]
PFICI_00571
03400 DNA repair and recombination proteins [BR:
pfy03400
]
PFICI_00571
DNA replication proteins [BR:
pfy03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PFICI_00571
DNA Replication Termination Factors
ELG1-RFC complex
PFICI_00571
Chromosome and associated proteins [BR:
pfy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PFICI_00571
DNA repair and recombination proteins [BR:
pfy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PFICI_00571
Check point factors
HRAD17(Rad24)-RFC complex
PFICI_00571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RuvB_N
AAA_22
AAA_11
DNA_pol3_delta
AAA_16
Mg_chelatase
AAA_assoc_2
AAA_24
AAA_19
AAA_28
AAA_14
AAA_7
DUF815
SLFN-g3_helicase
bpMoxR
AAA_5
Gp44_lid
ResIII
AAA_18
AAA_30
RNA_helicase
AAA_3
DUF5338
nSTAND3
AAA_23
Motif
Other DBs
NCBI-GeneID:
19265584
NCBI-ProteinID:
XP_007827343
UniProt:
W3XL27
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MASFFDLKARKAAAAANGGSVPKPEDNKKTARKQPWVEKYRPKTLSDVTAQDHTVNVLQR
TLQASNLPHMLFYGPPGTGKTSTILALAKELYGPEMMKSRVLELNASDERGISIVREKVK
DFARMQLVNPPPGYKDRYPVPPFKIIILDEADSMTQDAQSALRRTMETYSKITRFCLICN
YVTRIIDPLASRCSKFRFKSLDQGNAKKRLEEIAEKEGVALEDGAVDALIKCSEGDLRKA
ITFLQSAARLVGAIEKDDEGDRGDKMDVDEEKKPVSVRVIEEIAGVIPANTIEKLQKAMQ
PRAASATYPAVAKEVEEMVADGWSASQVVSQLYQAVIQDETIPDIQKNKITLIFSEIDKR
LVDGADEHLTMLDLSLRISNILAGKG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctttttcgacctcaaagcccgcaaggccgctgccgctgccaatggcggctcc
gtgcccaaacccgaagacaacaagaaaaccgcacgcaagcaaccttgggtagaaaagtac
agaccaaagaccctgtccgatgttactgcccaggatcacaccgtaaacgtactacaacgc
acccttcaagcctccaacctgccgcacatgctcttctacggacctcccggtacgggcaag
acctcgacgattctggcattggccaaggagctctacgggcctgaaatgatgaagtctcgt
gtcctagaactcaatgcctccgacgagcgtggtatctccattgtccgcgaaaaggtcaag
gactttgcccgtatgcagctcgttaaccccccgcctggctacaaggaccggtaccctgtg
ccgcccttcaagatcatcattctcgacgaggccgacagtatgacacaggacgcccaatcg
gcactcagacggacaatggagacatacagcaaaattacgcgattctgcctcatttgtaat
tacgtcacgaggatcattgatcctctggctagcagatgcagcaagtttcgcttcaagagc
ttggatcagggaaacgccaagaagaggctggaagagattgcagaaaaggaaggcgtcgca
ctagaagacggtgccgtggacgcgctgatcaagtgctccgagggcgatctgcgcaaggcc
atcacattcttgcagagtgcggcaaggttagtgggtgccattgagaaggacgacgaggga
gaccgcggagacaagatggatgtggacgaggaaaagaagcccgtgtcagtccgggtgatt
gaagagattgccggcgtcattcctgcaaatacgattgaaaagctgcaaaaagcaatgcaa
cctcgcgcagcgtccgctacctacccggctgtcgcaaaagaagtcgaggagatggttgct
gatggatggagcgcaagtcaggtcgtttctcagctatatcaagctgttattcaagatgaa
acaatccctgacattcagaaaaacaagatcaccttgatattctcagagattgacaagagg
ttggtggatggtgctgatgagcatctaacaatgttggacctgtcgctcaggatatcgaac
atcttggcaggcaaaggctag
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