Pestalotiopsis fici: PFICI_05361
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Entry
PFICI_05361 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFICI_05361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_05361
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
PFICI_05361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_22
TPR_19
TPR_2
TPR_16
TPR_14
TPR_CcmH_CycH
TPR_1
TPR_17
TPR_8
TPR_11
TPR_12
TPR_9
TPR_7
ANAPC3
ARM_TT21_C
TPR_6
TPR_10
TPR_COPA_B
T7SS_EccA1_N
NRBF2_MIT
Motif
Other DBs
NCBI-GeneID:
19270374
NCBI-ProteinID:
XP_007832133
UniProt:
W3XBR5
LinkDB
All DBs
Position
Unknown
AA seq
1429 aa
AA seq
DB search
MSSTAKQLKAVRELVKRKQWDDVLDQAQSIIKDDPKSFHAYVFLGFASAEKNKVEDAEKA
YEAAGRLKPSDPQPWQGLIKLYEKQGATKIAKYHQAALKLAAVFHEQDDMYRCQDVIDKF
VDFANAHGTRAQYVDALAAILPDSPIYPALEGRVPHPAKTYEKIAQILETDEKKRINTLI
GERRTRIGATLGNVTIDVNREVLGQSKLGNIYEQLINWSTDDDIRRQYEEKLLRFRYDRL
VVFPPGPEKEAELAIVQKLAGDMVIIDHPFRLAWDIAVNWQDNKEIRDWDVNVLNGYCSH
FPESDLYKVLTAFMTSSISPFPKKPASDPAPAQSEGDADSSEDDEEGGAPTSIIPFTEAD
RLSMMEDGVESTDSLLAYRLIGEYYQHLEEHERNVELMRKAMQVMVDLTNKIGKVFLQTN
QAFMLHLGTALVFYQSPRNHGEAKFLFDKVLEVDASSTAAQIGVGLIYEEEEEYDSAIDF
LERALQRDGTNLRVRAEVAWLYALKGDYTRCKADLESVLEAMSAKNAVSNELLAQTQHRL
GVCVWNLDTSKAARKSRSGAYAYFLEALKSDFSYAPAYTSLGIYYAEYAKDKKRARRCFL
KAVELSSAEVLSAERLARSFADDSDWDRVELVAQRVVDSGKVRPPPGSKRKGISWPFSAL
GVAELNKQDYAKSIVSFQSALRMSPNDYHSWVGLGESYASAGRFIAATKAILNAQKLEAS
LDDGSVGDTWFAKYMLANVKREIGEYDDAIVLYQDVTKTRPNEAGVVVALMQTLVESGLD
SIEKGFFGKAVELAQETISFALTVDPEVSSTFNFWKAIGDACSIFSSVQGRVEEFPAEQV
RKLVELGDDPESAYNVLHDIDGVGKDVVLAKGLFPEDEKLGVDLTRSLHASILAHKRAVH
LSAQDVHAQAVAYYNLGWAEHRAHTCLPSELRSKASRYHKAAVRCFKRAIELEAGNPDFW
NSLGVVTSEINPSVAQHAFVRSLHLNERSPHTWTNLGALALLQNDMQLANEAFTRAQSND
PDYTHAWLGQGFVALLYGDVREARGLFTHAMEISESSSLLTRRQYSVSLFDYILTDPSNL
KVVSLVQPLFALEQLNGLDPQNLAYGHLATLFQERTSDSPRAITMLEKACEDLEANYEAT
ESPISAGRFALAKTDLARSYLSAGKYEEAIECGEVALQLSGVDSESDLTSEQRRKARSSA
HLTVGLAQYFNGEVNDSLTYFESALEESDNNPDAVCLLAQVLWAIGSDEARERARTLLFE
VIGEDSTHVQSVLLLGVIALLDEDEESLEAVVAELNTLRTSDKVTDAEHSQIGQVLRAVA
ALSANSTENDVLAQMQNDVMLHPHMPHGWSMLANSSGEEYPAEVALKVATKAIPPRGELG
AAELASAYAGTARAADAQVSIVIAPWINNGWDSLNDAVAGLSKTWTLAR
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcacggccaagcagctcaaagctgtccgtgagctggtcaagcgaaagcagtgg
gatgacgttttggaccaagcccaaagcatcatcaaagatgacccaaagagtttccacgca
tatgtctttctcggttttgcatcggctgagaagaacaaagtagaggatgctgagaaggcc
tatgaagctgctggccgcctgaagccttcagacccacagccctggcaaggcttgatcaaa
ctctatgagaagcagggtgctaccaagatcgcaaagtaccaccaggctgcactgaaactt
gctgccgtctttcacgagcaggatgacatgtacagatgtcaagatgtgattgacaaattt
gtcgatttcgccaatgcccacggcactcgggctcagtatgttgatgcattggctgcaatc
ctgccagatagcccgatttatccagccttggaaggtcgtgtacctcatccggccaagaca
tacgagaagattgcccaaatcttggagacggatgagaagaagcgcatcaacacgcttatt
ggagagaggcgaacaaggataggtgcaaccttgggcaacgtcaccattgatgtgaatcgc
gaggtgctgggccaaagtaagctcggcaatatttacgagcaactaatcaactggtctacc
gatgacgacataagacgccagtacgaagagaagctcctgcgattccgatacgaccggctc
gtggttttcccgccaggtcctgaaaaggaggcggagcttgctatagtacaaaaacttgcc
ggcgacatggtcataatagatcatcctttcagacttgcctgggatattgcggtaaactgg
caagacaacaaggagattcgtgattgggatgtcaatgttctgaatggatattgctcccac
ttcccagagagtgacctttacaaggttctcacagctttcatgaccagcagtatttctcct
ttccccaagaaacctgcgtcggatcctgcgcctgcccagtcagaaggcgacgccgattcc
agtgaggatgatgaggaaggaggtgcacctacgtccatcattccatttacggaagctgat
cgattgtccatgatggaagatggtgttgaatctaccgattcgctccttgcgtatcgcttg
attggagagtattatcagcacctcgaagagcatgagcgcaacgtcgaactcatgcgcaag
gccatgcaggtcatggtcgatctgaccaacaaaatcggaaaagtcttcctgcaaaccaac
caggcgtttatgttgcatctaggtacagctctggtgttttatcagtcgccgaggaatcat
ggcgaggcgaaatttctgttcgataaggttctcgaagtggatgcctcttccacagctgca
cagattggagttggtctcatctacgaggaggaagaggaatacgactcggccattgacttt
ctcgagcgagcacttcaaagagacggcaccaatctacgcgtcagggccgaagttgcatgg
ctttatgctctgaagggcgactacactcgatgcaaggcagacctcgagtctgtccttgaa
gcaatgtctgcaaagaatgccgtgtccaacgagctccttgcacaaacgcaacatcgcctt
ggtgtatgtgtatggaacctggatacatcaaaggctgcaagaaagagccgttcgggagcc
tatgcgtacttccttgaagctctcaagagtgatttcagctacgcgcctgcatacacaagt
ctaggaatctactatgccgagtatgccaaggacaagaaacgtgcgagaaggtgcttcctg
aaggccgttgagctatcttcagccgaggtcctgtctgctgagcgtctggcacgatccttt
gctgatgatagcgactgggatcgtgtcgaactagttgcccagcgtgtggttgactctgga
aaggtgcgtcctccaccagggtccaagagaaagggcatcagctggcccttttctgctctt
ggtgtggcagaattaaacaaacaagactatgcaaagtccattgtttccttccaatccgct
ctacgcatgtcaccaaacgactaccattcatgggttgggctcggcgaaagttatgccagc
gctgggaggttcattgcagcgaccaaagcaattctcaatgcacaaaagctcgaggcatcg
ctcgatgacggttcagtgggcgatacgtggtttgctaaatacatgcttgctaatgtcaag
cgcgaaattggagaatacgacgatgctattgttctttaccaagacgtgactaagactcgg
cccaatgaagcaggcgtcgtggttgcactgatgcagaccttggttgaaagcggcctggac
agtattgaaaagggattttttggcaaagcagtcgagctggctcaagaaacgatttctttt
gccttgactgtcgatcccgaagtgtcaagcacctttaacttttggaaagctatcggcgat
gcctgctctatcttttcttccgttcagggtcgcgttgaagagtttcccgctgagcaggtt
cgaaaactggttgagctaggcgacgaccccgaatctgcctacaacgtcctgcacgatatt
gacggtgttggtaaagatgtagttctcgcaaagggattatttcccgaagatgagaagctc
ggcgtcgatcttacacgaagtcttcatgcatcgattctcgcgcacaaacgagctgtacat
ttgtccgctcaagatgtgcacgcacaggctgtcgcctactacaatctgggttgggcagag
caccgggctcacacttgtcttccgagcgagctccgatcaaaggccagcagatatcacaag
gcggctgtgagatgtttcaagcgcgcaatcgagcttgaggcaggtaatcctgatttctgg
aattctctaggtgttgtgactagtgagatcaatccctctgttgcgcagcatgcttttgtc
cgaagtcttcacttgaatgagcgaagccctcatacctggacaaacctcggcgcactagct
cttttgcaaaacgacatgcagctggccaatgaagcatttactcgagcacagtcgaatgat
ccagactacacacacgcctggctagggcaaggattcgtagctctcttgtacggcgatgtg
cgtgaagcccgaggattgtttactcatgctatggagatctcggagtcgtcatcgttgctt
actcggaggcaatattccgtctcgctgtttgattacattctcaccgacccgtcgaacctc
aaggtcgtctctcttgtgcagccgctctttgcattggagcaactgaatgggcttgacccg
caaaatctagcttacggtcatcttgccacccttttccaggaacgcaccagcgacagccct
cgcgcaatcaccatgctggaaaaggcatgtgaggatctagaggccaactatgaggccact
gagtcgcccatatcggctggccgctttgctctagccaagacggacttggctcgatcctac
ctttcggcagggaaatacgaagaggcaatcgaatgcggagaggtggcattgcaactgagt
ggtgtcgattcggaaagcgacctgacctcggaacagcgaagaaaagctcgctcgtctgct
catctcacggttggcctggcacagtactttaatggagaagtaaacgactcgttgacctat
tttgaatcggcactcgaggaatcagacaataaccctgatgcagtctgtctgttggcgcaa
gttctctgggctattggctcggatgaagcacgcgaacgagcccgtaccctcctctttgaa
gttattggggaggattctacccacgtccagtcagttctactccttggagttattgccctc
ctggacgaggatgaagaatcattggaagccgtggttgcggaactcaacacgttgagaacg
agtgacaaggtgacagatgccgagcactcacagattggccaggtcttgcgagctgtcgcg
gcgctctcagctaacagtacggagaacgacgtgcttgctcaaatgcaaaacgacgtgatg
ctgcaccctcacatgccccacggttggtccatgctcgccaattcgtctggcgaggagtac
ccggccgaggtagcgctcaaggtggcaaccaaggccattccgccccgaggtgagctcgga
gccgcggagctggccagcgcgtacgctggtacggccagagccgccgatgctcaagtgtct
attgtgattgcaccatggatcaacaatggttgggacagccttaatgatgcagtcgcaggg
ttgtcgaagacatggacattagcaaggtag
DBGET
integrated database retrieval system
