Phaeobacter inhibens DSM 17395: PGA1_c17370
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Entry
PGA1_c17370 CDS
T02192
Symbol
uvrA
Name
(GenBank) uvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PGA1_c17370 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pga03400
]
PGA1_c17370 (uvrA)
DNA repair and recombination proteins [BR:
pga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PGA1_c17370 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PGA1_c17370 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_21
RsgA_GTPase
nSTAND1
AAA_25
DnaJ_CXXCXGXG
DUF4350
nSTAND3
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AFO91437
UniProt:
A0AA85ZB84
LinkDB
All DBs
Position
complement(1814684..1817584)
Genome browser
AA seq
966 aa
AA seq
DB search
MAELKSIEVRGAREHNLKNIDVDIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLDMMEKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARAGT
PYSPATGMPIEAQQVQDMVDRIMTLEEGTRGFLLAPIVRDRKGEYRKEFLELRKQGFQRV
KVDGEFYELDEPPTLDKKFRHDIDVVVDRLVVREGVETRLADSLRTALDLADGIAILETA
PRAAEGEEAPEPERITFSENFACPVSGFTIPEIEPRLFSFNAPFGACPECDGLGVELFFD
ERLVVPDQNLKIYDGALAPWRKGKSPYFLQTIEAIAKHYQFNKNTKWKDLPNKVQQVFLR
GSGDEEIKFRYDEGGRVYEVERVFEGVIPNMERRYRETDSNWIREEFERYQNNRSCGVCE
GYRLREEALAVKIGPTGGRPDQLLHVGQVVQMSIREALAWIEDVPNQLSPQKQEIARAIV
KEIRERLGFLNNVGLEYLTLSRNAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLH
QRDNDRLLETLKNLRDQGNTVIVVEHDEDAIREADYVFDIGPGAGVHGGQVVSHGTPEMV
AADEGSITGQYLSGTREIAVPSVRRKGNGKSVKVVKATGNNLKNVTAEFPLGKFLCVSGV
SGGGKSTLTIETLFKTASMRLNGARQTPAPCETIKGLEHLDKVIDIDQRPIGRTPRSNPA
TYTGAFTPIREWFAGLPESKTRGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVE
CETCKGARYNRETLEIQFKGKSIADVLDMTVEDAQQFFQAVPSIRDKMDALMRVGLGYIK
VGQQATTLSGGEAQRVKLSKELAKRSTGRTLYILDEPTTGLHFEDVRKLLEVLHELVEQG
NSVVVIEHNLDVIKTADWIIDIGPEGGDGGGEIVAAGTPEDVAAAKGSHTGHYLKEILDA
RSLAAE
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttgaaatcaatcgaagtgcgcggtgcgcgcgagcacaacctgaaaaacatc
gacgtggatatcccgcgcgatcagctggtggtgatcaccggattgtccggctcgggcaag
tccagcctcgcgtttgataccatctatgccgagggtcagcgccgctatgtcgagagcctg
tcggcctatgcgcgccagtttctcgatatgatggaaaagccggatgtggatcatatcagt
ggcctgtcgcctgcgatctccatcgagcaaaagacgacatcgaagaacccgcgctcgacc
gtcggcacggtgaccgagatctacgactacctgcgtctgttgtttgcccgtgcgggcacg
ccctattcgcctgccaccggaatgccaattgaggcgcagcaggtgcaggacatggtcgac
cgcatcatgacgctggaggagggcacccgtggctttctgctggcccccatcgtgcgggac
cgcaagggcgagtaccgcaaggaattcctggagctgcgcaagcaggggttccagcgtgtg
aaggtcgatggcgagttctacgagctggatgagccaccaacattggacaagaagttccgc
catgacatcgacgtcgttgttgaccgtctggtggtgcgcgagggggtagagacccggctg
gccgacagcctgcgcacggcgctggatctggccgatggcatcgccattttggaaactgcc
ccgcgtgctgccgagggtgaagaggcgcctgagccggagcggatcaccttttccgaaaat
tttgcctgcccggtcagcggtttcaccatccccgagatcgaaccgcggctgttctccttt
aacgcgccgtttggggcctgcccggaatgtgacggtctgggggttgagctgttctttgac
gagcgtcttgtggtgccggatcagaacctgaagatttatgacggggcgctggcgccctgg
cgcaagggcaaatcgccctatttcctacagaccatcgaagcgattgcgaaacattatcag
ttcaacaagaacaccaagtggaaagacttgccgaacaaggtgcagcaggtgttcctgcgc
gggtctggcgacgaggaaatcaaattccgctatgatgagggtggccgcgtctatgaagtt
gagcgcgtgttcgaaggggtgatccccaatatggaacggcgctaccgggagacggattcc
aactggatccgcgaagaattcgaacggtatcagaacaaccggtcctgtggcgtctgcgaa
ggctatcgtctgcgcgaagaggcgctggcggtcaaaatcggtcctactggcggccgcccg
gatcaactgctgcatgtggggcaggtggtgcagatgtcgatccgcgaggcgctggcctgg
attgaggatgtgcccaatcagctgtcgccgcagaagcaggaaatcgcccgcgccatcgtg
aaggaaattcgcgaacggcttgggtttctgaacaatgtcggtctggaatacctgaccctc
agccgcaatgccggcactctgtccggtggggagagccagcggatccgtctggcatcgcag
atcggctctggcctgaccggcgttctttatgtgttggacgaaccgtccatcggtctgcac
caacgcgacaatgatcgcttgctggagacgctgaaaaacctgcgggatcagggcaatacg
gtgatcgtggtcgaacatgacgaggacgcgatccgcgaggcggattatgtctttgacatc
gggccgggtgcgggtgtgcatggcgggcaggtggtcagccacggcacgccagagatggtg
gccgctgatgaaggctcaatcaccgggcagtatctgtccggcacacgcgagattgcggtg
ccatcggtgcgccgcaaaggcaacggaaaatcggtgaaggtggtcaaggccaccggcaac
aacctcaagaacgtcacggcggagttcccgctgggcaagttcctttgtgtgtcgggcgtg
tcgggcggcggcaagtccacgttgaccattgaaaccctgttcaaaaccgcgtccatgcgc
ctcaacggtgcgcgccagacgccggccccctgtgaaaccatcaaggggttggagcatctg
gataaggtgatcgacattgaccagcggcccattggccggacaccgcggtcaaacccggcg
acctatactggggcctttaccccgatccgcgagtggtttgccgggctgccggaatccaaa
acccgtggctacaaaccggggcggttttctttcaacgtgaagggcgggcgctgcgaggcc
tgtcagggcgatggtgtcatcaaaatcgagatgcatttcctgccggatgtctatgtggaa
tgtgagacatgtaagggcgcacgctacaaccgcgagacgctggaaatccagttcaagggc
aagtcgattgccgatgtgctggatatgacggtggaggatgcgcagcagtttttccaggcg
gtgccgtcgatccgcgacaagatggacgcgctgatgcgggtgggacttggctatatcaag
gtcggccagcaggcgaccaccctgtcgggcggcgaggcgcagcgggtcaaactgtcgaag
gaactggccaaacggtccaccgggcggacactgtatattctggatgagccgaccacaggt
ctgcatttcgaggatgttcgcaagctgctggaagtgctgcacgaactggtcgaacagggc
aactccgtggtggtgatcgagcataatctggatgtgatcaaaaccgctgactggatcatt
gatattggcccggaaggcggcgacggcggcggtgagatcgtcgccgctggcacgccagag
gatgtggccgcagcaaagggcagccatactggtcactacctcaaagaaatcctcgacgcc
cgcagtctcgcggcggagtga
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