Phaeobacter inhibens DSM 17395: PGA1_c18140
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Entry
PGA1_c18140 CDS
T02192
Symbol
cpdB1
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase CpdB
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00230
Purine metabolism
pga00240
Pyrimidine metabolism
pga01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
PGA1_c18140 (cpdB1)
00240 Pyrimidine metabolism
PGA1_c18140 (cpdB1)
Enzymes [BR:
pga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
PGA1_c18140 (cpdB1)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
PGA1_c18140 (cpdB1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
TAT_signal
PTase_Orf2
Motif
Other DBs
NCBI-ProteinID:
AFO91511
UniProt:
A0AA85ZCZ3
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All DBs
Position
1891239..1893197
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AA seq
652 aa
AA seq
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MPIQLDRRSFLAGSAGLIALHPFSVQAASNQVHLRLMETTDLHVHVFPYDYYADKPRDTV
GLARTASLIGDIRAEATNSLLLDNGDFLQGNPMGDYIAYERGMKEGDTHPVIQAMNAVGF
DGSTLGNHEFNYGLDFLMKSLAGADFPVVCANVAKSTGAGPRDDTTLLPPYVILERELTD
GAGNTHPIKIGLIGFVPPQVMNWDRRHLEGNVQARDILETARAYVPEMKEKGADIIIALS
HSGIGSAQEVDGMENASVPLAAVEGIDAIMTGHSHLVFPSSTYADFAGVDVDKGTIHGTP
ATMGGFWGSHMGLIDLMLERDGSGWRVVGHASEARPISQREEDRSITALVESAPAVLAAA
QKEHDETLQYVRRAVGKTDAPLHSYFALVADDPSVQIVSIAQTWYIEQMLKGTEHEGLPI
LSAAAPFKAGGRGGAEYYTDVPKGDVAIKNVADLYLYPNTARAVRVTGAQVKDWLERSAG
MFNQITPGAADQVLLNPAFPSYNFDVIDGVTYQIDLSQPSKFGPKGALENPDANRIVNLE
FDGAPIDPAQEFIIATNNYRAGGGGAFPGAMGDTVVFEGPDTNRDVIVRYIVEKGTISPR
ADANWRFAPLADTSVLFDTGPKAAAYVDSVESIAIEPAGEGPDGFARYRISL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccaacttgatcgccggtcctttctggctggcagcgcagggcttattgcgctg
catccgttttctgttcaggcggcctccaaccaggtgcatctgcgcctgatggagaccacg
gacctgcatgtgcatgtgtttccctatgactattatgccgacaaaccgcgcgacacggtc
ggactagcgcgcacggcctcgctgatcggcgatatccgcgccgaggcgaccaattcgctg
ctgctggacaatggcgattttcttcagggcaatccgatgggcgactatattgcctatgag
cggggcatgaaggaaggcgacacccacccggtcattcaggcgatgaatgctgtggggttt
gatggctcgacgctgggcaatcatgagttcaactacgggctggatttcctgatgaaatcc
ctcgccggggccgacttccccgtggtctgcgccaatgtcgccaaatcaaccggcgccggt
ccgcgcgacgacacaaccctgctgccgccctatgtgatcctggagcgcgaactgaccgat
ggcgcgggcaacacccatccgatcaagatcggcctgattggttttgtgcccccgcaggtg
atgaactgggatcgccgccatctggagggcaatgttcaggcgcgcgacattttggaaact
gcccgcgcctatgtaccggagatgaaggagaaaggcgctgacatcattatcgcgctctcg
cattccggtattggcagcgcacaggaagtcgacgggatggagaatgcctcggtcccgctg
gcggcggttgagggcatcgatgccattatgaccggccattcgcatctggtcttcccctcc
tccacctatgccgattttgccggagtggatgtcgacaagggcaccatccacggcaccccc
gccaccatgggcggtttctggggcagccatatgggtctgattgatctgatgctggaacgc
gatggcagcggctggcgcgtcgtcggccacgcgtcagaggcgcgcccgatttctcagcgc
gaagaggaccggtcgatcaccgccctggtcgaaagtgcccctgcggtgctggcggccgcg
cagaaagaacatgacgagacgctgcaatatgtgcgccgcgccgtgggcaagactgacgcg
ccgctgcacagctattttgcactggtcgccgatgatccatcggtgcagatcgtgtcgatt
gcgcagacctggtacattgagcagatgctcaaaggcaccgaacatgaaggcctgccgatc
ctctctgcagcggccccgttcaaagctggcggtcgcggtggtgcggagtattacaccgat
gtgcccaagggcgatgtcgcgatcaagaatgtcgcggatctctacctctatcccaacact
gcccgtgcggtgcgggtaaccggcgcgcaggtcaaggattggctggaacgctctgccggt
atgttcaatcagattacccccggtgcggcggatcaggtgctgctcaatcccgccttcccc
agctacaactttgacgtgatcgacggggtgacctatcagattgatctgtcgcaaccctcc
aagttcggccccaagggcgcattggaaaaccccgacgccaatcgcatcgtcaatcttgag
ttcgacggcgcgccgattgatcccgcgcaggagttcattatcgccaccaacaactaccgc
gcaggcggcggtggcgccttcccgggcgcgatgggagataccgttgtctttgaggggccg
gacaccaaccgtgatgtgatcgtgcgctatatcgttgagaaaggcaccatcagcccgcgt
gcggatgccaattggcgctttgcgccgctggcggacacatcggttctgtttgacaccggc
ccaaaggcggcggcttatgtcgacagcgtcgagagcattgcgattgaacctgcaggtgaa
ggcccggatggctttgcacgctatagaatctcgctgtga
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