Phaeobacter inhibens DSM 17395: PGA1_c22550
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Entry
PGA1_c22550 CDS
T02192
Name
(GenBank) DNA polymerase III beta subunit-like protein
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga03030
DNA replication
pga03430
Mismatch repair
pga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGA1_c22550
03430 Mismatch repair
PGA1_c22550
03440 Homologous recombination
PGA1_c22550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pga03032
]
PGA1_c22550
03400 DNA repair and recombination proteins [BR:
pga03400
]
PGA1_c22550
Enzymes [BR:
pga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PGA1_c22550
DNA replication proteins [BR:
pga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PGA1_c22550
DNA repair and recombination proteins [BR:
pga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PGA1_c22550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
Motif
Other DBs
NCBI-ProteinID:
AFO91941
UniProt:
A0AA86DBQ6
LinkDB
All DBs
Position
2338136..2339272
Genome browser
AA seq
378 aa
AA seq
DB search
MNAHSEIKTDVATKSLKVDISELRAALAWVNKVRETWSRIPILSQNLFQVEGGQLAITAT
CLDREARQTLSCDTSDAWSFVMNGHRVMKVTAGLSGTVTIEHDIAKDLLTLTANGMSLAM
NVMAPPEDWPTTNKQEPLGGIEVGENTLLRALNLVKSCISTEETRYYLNGIYWTSHDGAS
RMVTTNGHRLARLDLEAPNPPFDVIFPRIGITPLAAMLTANGNQLAKITYRGADKTPTLL
SIEMGDRELHCKLIDGTYPDYNRVIPSVDGEQAFDIIIPKSATQRLRLMAGPHDLGCKIS
PEKGTMTIGREDHDGKMSVTYAAKGKSGPDIGFNTLYLAQTTATMGNIRLRAKDNGAPAL
ATSEAHTDLIMVLMPMRV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcacagtgaaatcaagactgatgtcgccaccaaatcactcaaggtcgacatc
tcagaacttcgcgccgccctcgcttgggtcaacaaggtgcgggaaacgtggtcacgcatc
ccgatcttgagccagaacctgtttcaggttgaaggcggccagctagctatcactgccacc
tgccttgatcgcgaagcacggcagacactctcctgcgacacctctgacgcttggtcattt
gtgatgaacggccaccgagtgatgaaagtcacggcaggtctgtccggcaccgtcaccatt
gagcatgacattgccaaggatctcctcactctgacggctaacggcatgtcccttgccatg
aacgttatggcaccgcccgaggactggccaactaccaataagcaagagcccctgggcggc
attgaggtcggcgaaaacaccctcctccgagcgcttaacttggtcaaatcgtgtatctcg
accgaagaaacccggtactatctgaacgggatctactggacttcacacgacggtgcgtca
cgcatggtgacgacgaacggacatcggcttgcgcgcctggatctcgaagcgccaaatccg
ccatttgatgtgatcttcccgcggatcggcataacgcctcttgcagccatgctgaccgca
aacggcaatcagcttgccaagatcacgtaccgcggtgccgataagacgcccacccttctt
agtattgagatgggcgaccgcgaactgcactgcaaactgatcgatggcacatatccggat
tacaaccgggtcatcccctcagtcgacggggaacaggcgttcgatatcatcattcccaaa
tccgccactcagcgccttcgtttgatggccggaccgcatgaccttggctgcaagatttcc
cctgaaaagggcaccatgacgattggccgagaggatcacgatggcaagatgtcagtgact
tatgccgccaagggcaagtccgggccggatatcggtttcaacactctctacctggcccag
acaacggcaacgatggggaacattcgcttacgcgcgaaagacaatggcgcacctgccctg
gctaccagtgaggcacatacggatctgatcatggtcctgatgccgatgcgagtttga
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