Pseudomyrmex gracilis (graceful twig ant): 109857354
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Entry
109857354 CDS
T05003
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgc04040
]
109857354
Ion channels [BR:
pgc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109857354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
109857354
NCBI-ProteinID:
XP_020289138
LinkDB
All DBs
Position
Unknown
AA seq
1692 aa
AA seq
DB search
MTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEA
AEEEAIREAEEAAQARENKIAAREAAAREAAAAREAAATEAAEQIVKSPSDFSCHSYELF
VGQEKGNDDNNKEKMSIRSIESASDPRHVKQINNNHSASKVRKVSAVPRAANGQFTYAYQ
ESLRKASLSLPGSPFNLRRSSRGSHQFTIRNGRGRCFVPPGGDRKPLVLSTYLDAQEHLP
YADDSNAVTPMSEENGTIVVPVYYANLGSRHSSYTSHASRLSYTSHGDLAFPGIRGIDSI
GKQITKQDQILRNRYNKQTTPANGHVTDNNQKSYHFETDLEDSMGKTKQQDNPFIEPSQQ
HAVVDMKDVMVLNDIIEQAAGRQSQTPEQGVSTYYFPTDDDEEEPTFKDKLLAGLFRCID
IFCVWDCCWVWLEFQKWVSLLVFDPFVELFITLCIVVNTLFMALDHHDMDKEMERVLKSG
NYFFTATFGIEATLKLIAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRL
LRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYVDHVDYF
PDGDMPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLN
LFLALLLSNFGSSNLSAPTADNDTNKIAEAIDRIARFIKWIKRNVLYIAKLMRAKFTNQI
SDQAPGEGPSNSWKEDGIDRDGDLDLADGELDAYRDKKSAKELNQLEVAIGDGMEFTIHD
LKNKLKRGKLCMNNTKVIANSINHHDFRLDNDYINQNEDDTISNKSYGSHKNRAFKDESH
KGSMDSLNGEEKKDASKEDLEQEEDLEDEDEEGEEFDGVIIQADDDPIQPNYPADCCPEN
WYKKFPFLAGDDNAPFWQGWAILRLKTFRLIENKYFETAVIVMILLSSLALALEDVHLQR
RPILMDALYYMDKIFTVIFFIEMLIKWLALGFRKYFTNAWCWLDFIIVMVSLINFIASLC
GAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIM
GVQLFAGKYYKCVDANKTTISHEIIPDRNACYAENFTWENSPMNFDHVGKAYLCLFQVAT
FKGWIQIMNDAIDSREINKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQK
KKAGGSLEMFMTEDQKKYYNAMKKMGNKKPLKAIPRPRWRPQGIVFEIVTDKKFDMIIML
FIGLNMLTMTLDHYQQSETFSNVLDYLNMIFIVIFTSECLMKIFALRYHYFKEPWNLFDF
VVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPA
LFNICLLLFLVMFIFAIFGMSFFMHVKDKSGLDDVYNFKTFGQSMILLFQMSTSAGWDGV
LDGIINEEDCQEPDNEVGYPGNCGSSTIGIAYLLSYLVISFLIVINMYIAVILENYSQAT
EDVQEGLTDDDYDMYYEIWQQFDPDGTQYIRFDQLSDFLDVLEPPLQIHKPNKYKIVSMD
ITICKGDLMFCVDILDALTKDFFARKGNPIEEPDLGEVGTRARPDEVGYEPVSSTLWRQR
EEYCARLIQNAWRKHKQQRLGGPSEESDDPDTDLCARQTKVLVESDGYVTKNGHRVVIHS
RSPSVTSRTADV
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgactcaggattactgggagaatctctatcagctggtgcttagatcggccggaccgtgg
cacatgctctttttcatcgtcatcatcttcctcggatccttctatctcgtgaacttgatc
ctcgctattgtcgcgatgtcgtacgacgagttgcagaagaaggcggaggaggaggaagcc
gccgaggaggaagccataagagaagccgaggaggccgcacaagcgagggagaacaagatc
gcggcgcgagaagctgccgcgcgagaagcggccgcggcgcgagaagcagccgcgaccgag
gccgcggaacagatcgtcaagtcgccgtcggacttctcgtgccacagttacgaacttttc
gtcggccaggagaagggcaacgacgacaacaacaaggagaagatgagcatacgctcgatc
gagtcggcgagcgatcccaggcacgtcaagcagatcaacaacaaccacagcgccagtaaa
gtgcgaaaagtcagcgccgtccctcgcgccgctaatggccagtttacttatgcctaccag
gaaagcctgcggaaggcgagcctgagcctacccggctcaccgttcaatctgcgccgcagc
agtcgtggcagccatcagttcacgatacgcaatggccgcggccgatgcttcgtaccgccc
ggcggcgaccggaagcccctggtcctgtcgacgtatctggacgcccaggagcatctgcct
tacgccgacgactcgaacgcggtcacgccgatgtccgaggagaacggcacgatcgtggtg
ccggtgtactacgcgaatctcggctcgcgtcactcgtcctacacctcgcacgcctcgcga
ctctcctacacgtcccacggcgacctggcgttccccggtatacgcggcattgacagcatc
ggcaagcagatcaccaagcaggatcagatactcaggaatcgctacaacaagcagaccacc
cccgccaacggccacgtcacggacaacaatcagaagtcctatcactttgaaaccgacctg
gaggattccatgggcaagaccaagcaacaagacaatccgtttatcgaaccgtctcagcag
cacgctgtggtcgacatgaaggatgtaatggtgctaaacgacatcattgaacaggccgcc
ggtcgtcagagtcagacgccggagcaaggagtttcgacctattactttccgacagacgac
gatgaagaggagcctacgttcaaggacaagttattggccggtttattccggtgcatcgac
atcttttgcgtctgggattgctgttgggtctggctggagtttcaaaagtgggtgtccttg
ttggtgtttgatccgttcgtagaactttttatcacactttgcatcgtcgttaacacgctc
ttcatggcgctcgatcatcacgacatggacaaggaaatggagagagtgcttaaatccggc
aattacttcttcacggcgacattcggcatcgaagcgacgctgaagctaatagcgatgagc
ccgaagtattattttcaagagggttggaacatctttgattttatcatcgtcgctctctcg
cttctggaactaggtctggagggcgtgcagggtttgtcggtgttgcgatcgttcagattg
ctgagagtgttcaaactggcgaaatcgtggcctacgttgaatctgctcatctccatcatg
ggtagaacggtgggcgcgttgggtaatttgacgtttgtgttgtgcatcattatcttcatc
ttcgccgtgatgggcatgcagctcttcggcaagaattacgtcgaccacgtcgactacttc
ccggacggcgatatgcccagatggaacttcaccgatttcatgcactcgttcatgatcgtt
ttccgggtgttgtgcggagagtggatcgagtccatgtgggattgcatgctcgtcggcgac
gtgtcttgtatacctttcttcttggccaccgtcgtcatcggtaacttggtcgtcctgaat
ctcttcttagctctgttgctcagcaacttcggctcgtcgaatctgtcagccccgaccgcg
gacaacgacaccaacaaaatcgcggaggcgatcgatcgaatagcgcgtttcattaagtgg
atcaagcgaaatgttctttacattgctaagttgatgcgagccaaattcaccaatcagata
tccgatcaggcgccaggtgagggaccgtccaacagttggaaagaagatgggattgatcgc
gatggggacctagatcttgcagatggtgagttagacgcgtacagagacaagaagagcgcc
aaagagctcaatcaactcgaggtagccatcggtgacggaatggagttcaccattcacgat
ctgaagaacaaactgaagaggggcaagctgtgcatgaacaatacgaaagttatcgcgaac
tcgataaatcaccacgatttcagactggacaacgattacatcaatcagaacgaggacgac
accatcagcaacaagtcgtacggcagtcacaaaaatcgagcgttcaaagacgagagtcac
aaaggcagcatggactcgctgaacggcgaggagaagaaagacgcgagcaaggaagattta
gaacaggaagaagatctggaagacgaggacgaggaaggtgaagagttcgatggagtgatc
atacaagcggacgacgatcctattcagcccaattatccggccgattgctgtccggaaaat
tggtacaagaaatttccgtttctggccggtgacgacaacgctcctttctggcagggctgg
gcgattttgcgtttgaagacgttccggctgatcgagaacaaatatttcgagactgccgtc
atcgtgatgattcttctgagcagcttggccttggccttggaggatgttcatcttcaacgt
cgacctatcctgatggatgcgttgtattacatggacaaaatattcactgtgatcttcttc
atcgaaatgttgatcaaatggcttgctctaggatttagaaagtatttcacaaacgcctgg
tgctggcttgactttatcatcgtcatggtatcgctcattaacttcatagcgtctctctgt
ggcgctggcgggattcaagccttcaaaacaatgcggaccctaagggccctaaggccgctc
agggcgatgtctagaatgcagggaatgcgggtagttgttaacgctttggtccaagccatt
ccatccatcttcaacgtgttgctggtatgccttattttctggcttatattcgccatcatg
ggggtgcagctgttcgctggcaaatattataagtgtgtcgacgcaaacaagacgacaatc
agtcatgagataataccggatcggaacgcgtgttacgcggagaatttcacgtgggaaaac
tcgccgatgaatttcgatcacgtcggtaaagcgtacctatgcctattccaagtggcaact
ttcaaagggtggattcaaatcatgaacgacgcgatcgactccagggagatcaacaagcag
ccgattcgcgaaacgaacatttacatgtatctttacttcgtgtttttcattatatttgga
tcgttttttaccctcaacctgtttattggtgtgatcatcgacaactttaacgaacagaag
aagaaagccggtggttccctcgagatgttcatgacggaggatcagaagaaatattacaac
gccatgaaaaaaatgggcaacaagaagcctctgaaagcaattcctcgaccgaggtggcgt
ccgcaagggatagtgtttgaaatagtgacggacaagaagttcgatatgataattatgctg
tttatcgggctgaacatgctcacaatgacattggaccattatcaacagagcgaaacgttc
agcaatgttctggactatctcaacatgatattcattgtgatattcaccagcgagtgtctc
atgaagatcttcgctctgcgctaccactacttcaaggagccgtggaacctctttgatttt
gttgttgttatattgtcaatattaggtctggtgctcagtgacattattgagaaatacttc
gtgtcgccgaccttgcttcgtgtggtgagagtggcaaaggtcggtcgtgtgcttcgactc
gtgaaaggtgccaagggtatccgaacccttctcttcgccctggcgatgtcgttgccagct
ctcttcaacatttgcctactgctctttttggtgatgtttatcttcgcgatatttggcatg
tcgttcttcatgcacgtcaaggacaaaagcggtctggacgacgtgtacaacttcaagacg
ttcgggcagtcgatgatactgctgtttcagatgtcaacgtcggccggttgggacggtgtt
ctcgacggtataataaatgaagaagattgccaggagccggacaatgaagtcggctatccg
ggcaactgcggctcgtcgacaatcgggatcgcgtatctgctctcgtaccttgtcatcagc
tttctgatcgtcatcaacatgtacatcgccgtgatcctcgagaattactcgcaggccacc
gaagacgtgcaggagggtctgacggacgacgactacgacatgtactacgagatatggcag
cagtttgatccagacggcacgcaatacattagattcgaccaactttccgactttttggac
gtattggaacctcctttgcagatacacaagcccaacaaatacaaaatcgtgtctatggat
atcacgatttgtaaaggggatcttatgttctgcgtggatattcttgacgccctcaccaag
gactttttcgcgcggaagggcaatccgatcgaagagcccgacttaggcgaggtcgggacg
cgcgctcgcccggacgaggttggctacgagccggtctcctccactttgtggcggcagcgc
gaggaatattgcgcgcgtctaatacagaacgcctggcggaaacacaagcagcaacgtctt
ggcgggccgagcgaagagagcgacgatccggacacggatctgtgcgcacggcagaccaag
gtgctcgtcgagagcgacggttacgtcactaagaacggtcaccgcgttgtcatacacagc
cgatcgccgagcgtcacttcgagaaccgcggacgtctga
DBGET
integrated database retrieval system
