Pseudomyrmex gracilis (graceful twig ant): 109857696
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Entry
109857696 CDS
T05003
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109857696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109857696
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109857696
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109857696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
HTH_upst_double_PIN
Motif
Other DBs
NCBI-GeneID:
109857696
NCBI-ProteinID:
XP_020289858
LinkDB
All DBs
Position
Unknown
AA seq
2152 aa
AA seq
DB search
MELGYSFTSNVEECKAALAGLSAREITPTCAARVLALMARTWTNLDDAGGLQSFWGNSGT
SQDSNKEKSSDSTPPTTWNVEVFVQALKELHSTLSWNEVIVKLDHAEFTIKDRQGLSILI
TGLKLGLQHQGYPPDMFPVELFYRHWDNVDGQFSLIQQILKHPDIFCFADYPYHSVTVDV
LKAAPESDSKEAQTWRSLNIVELFLHMAERGLYAPVQEIFKWPIQHCPDVLVLALLQINQ
PITLLRQEIFSSLLPIFLNNHPNSAVILHHAWHTNNVKIKTLIMHAMAEWYIRGDYDQTR
LSRILDVAQDLKALSALLNAQSFPFVIDLACLASRREYLKLEKWLTDKIRDHGELFVAAC
VKFLQRRCPQVMGPGVKEDLTVPKASQLPQETLTTMLACLQVCAGTVSQELADVIMTMVQ
TCSLMLSKSTMNRPPPPGVLRHRALEPFNPATLGSQLFSSKQVDPLGNLSTSLASMGLST
GLGPPSSSAFNLPGGLGPLVSAPGSPSRLMGPSPSPFPMLPLSSQLHSGPVNTTGPSVIP
GSTISGLARLGGPPAGIEKTRIPETSNLLSDMGQNVSKEVEDEANGYFQRIYNHPPHPTL
SIDEVLDMLKKFQDSSARREREVFNCMLRNLFEEYRFFPQYPEKELQITAQLFGGIIERG
LVNSYMTLGLALRFVLDALKKQEGSKMYYFGITALDRFKSRLKDYQTYCEHVRTIPHFNE
FPPHLIEYIEYGLQGQEPPSRPQGSVLPKTLAAMLAPPITTPYKTITTTTITTTTTQAKS
STTTPTTSISARPSMPSVANATNIDTLLVATDKEEKITTPPEALQDKTAFIFNNLSQLNL
QQKCDEIREIVTEEYWPWMAQYLVMKRASIELNFHALYSNFLDCIKLPDVNKMVTRETFR
NIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILQIDIDLKSLLVEAYHKGQQE
LLYVVPFVAKVLESCAKSRVFRPPNPWTMAIMNVLAELHQEPDLKLNLKFEIEVLCKNLS
IDVGELKPIIYLKDPEKLRNLEYQLSHPNKKSETTNNQQPPQQGPIEELVGSTTTGAINP
QSAPPVNTTPSLPTGPPEPRFNYMDISVTGIANISQHITINNQLPLFQTHPHLKQFVRPA
VERAIQEWIHPVVDRSIKIALTTSEQIVRKDFALDPDEMRMRTAARHMARNLTAGMAMIT
CRDQILASISTNLKQAFLSALITTTTQQKEVAEQAANVVAADNMELACAFVQKTAIEKAI
PEMDKRLLNEIELRKIARQEGRRYCDPIIKYQAERMPEQIRLKVGGVTPQQMAVYEEFSR
NIPGFQPLSERDTQALFMPKPISETPVTAFTPNSAVTVAAAQQVVAYAAAAVSNDEVGTM
LEKLAGEVELLLAAMGPAAPPQQITALHSLLESIILTRRSRDTGAAMTLLKKAVEGLLDG
PLISSSVIESENLIQRYREVHLRILKCLQDPRVYGMQWTNKHVTRCLTECREEYRYNFEA
VDYLIRSHLISLPQYDAALAQAIETGSAMATAFAMQLVQLYLIDERQATHVTETDLFHTI
ETLARMAHHRTPPEGILLFRLTNLVDSLRANHDTTGILVDRAPAGPTAHIHSGILQVRAR
DFDDPPGLMEKTEYLLREWVQMHHNPQHARDPTKAFGAFVHQMNIHGILKTDDLITRFFK
LSTQMCVDLCYRALSDTTSAPTILRAKCFHSLDAFVRLVSLLVKHSGDATNTHTKINLLN
KVLGIVAGVLLQDHEIRGTDFQQLPYHRIFIMLFLELCAPEPVLEAVNFQVLTAFCHTLH
ILRPAKASGFCYAWLELVSHRVFIGRMLAITPQQKCWGMYAQLLIDLFKYLAPYLRNAEL
AKPVTSLYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMRNLILSAFPRNMRLPD
PFTPNLKVDLLQEISLAPRVLSNFASTIQPLTFKKELDSYLKARAPVTFLSELRSNLQVS
QEAGARYNIQLMNALVLYVGTQAIGFIRNKGLTPNMSTIAHSAHMDIFQNLAVDLDTEGR
YLFLNAIANQLRYPNSHTHYFSCALLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLL
ITFIELIKNPTYKFWSHEFVHCAPEIEKLFESVARSCMVQKQVPTTETEIPE
NT seq
6459 nt
NT seq
+upstream
nt +downstream
nt
atggaattaggatatagttttacaagtaatgtagaagaatgtaaagcagcattagctggc
ttaagtgctagggagataactcccacgtgtgctgctcgtgtactggcgcttatggctcgc
acatggacgaaccttgacgatgccggaggtctgcaatcattttggggcaattcgggaacc
tcgcaggattccaataaggaaaaatcatcggacagtactcctcctacaacgtggaacgtc
gaagtgtttgttcaagctttaaaagaacttcattctacattgtcttggaacgaagttatt
gtaaaattagatcacgcggagtttactattaaggatagacaaggtttaagcatattaatt
acgggcctcaaattgggtctccagcatcagggatatcctcctgacatgtttcccgtcgag
ctcttttatcggcactgggataatgttgacggtcaattttctctaattcaacaaattctc
aagcatcccgatatattttgcttcgctgactatccgtaccattcggtgaccgtcgatgta
ctgaaggcagctcccgaaagtgatagcaaggaagcgcaaacgtggcgatcgttaaatatc
gttgaattgtttctgcacatggccgagagaggtttatacgctcccgtgcaggaaatattt
aagtggccaattcaacactgtccagatgtactcgtattggcgctactgcagataaatcaa
cctattacactgttgagacaagaaatattcagctcacttctgcctatctttctcaacaat
catccaaactctgctgtgatattgcatcatgcatggcatacaaataacgtcaaaataaag
acgctcattatgcatgctatggcggagtggtacataagaggagattatgatcaaacgaga
ttgtcgcgtatattggatgtagcacaagatttgaaagctctttccgctctacttaatgct
cagtcatttccgttcgtcatcgatctggcgtgtttagcgtctcgacgagaatatttgaaa
ctagaaaagtggctgacagacaaaatcagagatcatggcgaactttttgtcgcggcatgc
gtcaagtttctgcaaagacgttgtccgcaagttatgggtcccggtgtaaaagaagatctc
acggttcccaaggcgagtcaattacctcaagaaacgctcacaacgatgctagcctgtttg
caagtttgtgccgggactgtttcccaagaacttgctgatgtaataatgactatggtgcaa
acttgtagtctaatgttaagtaaaagtacaatgaacagaccaccgccaccaggagttctg
aggcatcgagcattagaaccgttcaacccagcgaccttaggaagtcagttgttctcctcg
aagcaagtagatcctcttggaaatctcagtacaagtctcgcttccatgggccttagtacg
ggtcttggacctccgagtagttccgcgttcaatttgcctggcggattaggacctctggtg
tcagcgcctgggtctccgtcacgactcatgggaccctcaccaagtccgtttccaatgtta
ccgttatcgtcgcagcttcactccggtccggtcaatactacgggaccttctgtaattccc
ggtagtacaattagtggattagcccgtcttggtggaccaccagcgggtattgagaaaaca
agaattccggaaacctcgaatttactctcggacatgggacaaaatgtgtctaaagaagtg
gaggatgaagcgaacggttactttcaacgtatatacaatcatccgccgcatccaactttg
tctattgacgaggttctcgacatgctgaagaagtttcaagattcgtccgccagaagggaa
agagaagtgtttaattgtatgctacgcaatttatttgaagaatatagattttttccacaa
tatcccgagaaggagttgcagataacggcgcaattgtttggtgggattattgaaagaggt
cttgttaatagttacatgactctcggtttggcattaagatttgtcctcgacgcacttaaa
aaacaagaaggcagtaagatgtactatttcggtataacggccctggatcggtttaaaagc
cgtttgaaggattatcaaacttactgcgaacacgttagaacaataccgcatttcaacgaa
ttcccaccacacttgatagaatacatcgaatacggactgcaaggccaggaaccaccgtcg
aggccacagggctcggtactgcccaagactttagcggccatgttggcacccccaatcacg
actccgtacaagaccataaccacgaccaccatcacaactaccaccacgcaggcaaaatcg
tctaccacgactcccactacgtccatctcggctagaccttctatgccttcggtcgctaac
gcaaccaacatcgatacattgctcgttgcaactgacaaagaagaaaagatcacgacgcca
ccggaagctctgcaagacaagacagcctttatctttaacaatctcagccaattaaatcta
caacagaaatgcgacgagattcgcgaaattgtcacagaagaatattggccgtggatggcg
cagtatctagtaatgaaacgtgccagtatagaattgaactttcacgcgctgtactcgaat
tttttagactgcataaaactgcctgatgtcaataaaatggtcacgagagagacctttcga
aatattaaagttctcttacgaagtgacaaggggatagccaatttctctgatcggtcgttg
ttaaaaaatttaggacattggctcggaatgttgacgctcggcaggaataagcctatttta
cagatagacatagatctaaaaagtttactcgttgaagcgtatcacaaagggcagcaagaa
ttgctgtacgtagtaccttttgtagcaaaagtgctcgaaagttgcgcaaaaagtcgcgta
tttcgcccacctaatccatggaccatggccattatgaatgttctagctgagttgcatcaa
gaaccagatttaaaattaaatttgaagtttgagatagaagtactgtgcaaaaatttaagt
attgatgttggggaactaaaaccaatcatttatctgaaagatcccgaaaaattgcgcaat
ctggaatatcaattgtcgcacccgaacaagaaatcggagacaaccaataatcaacagcca
cctcagcaagggcctatagaggaattggttggatcgacgacaaccggcgctatcaatcct
caatccgcgcctcccgtgaacacaacaccctcgttgccgactggtccgcccgaacctcga
ttcaattatatggatatatcagtaacaggaatcgctaatatatcccaacatattaccatc
aacaatcaattaccactatttcaaacccatcctcatttgaagcagtttgttcgtcctgcg
gttgaaagagcaattcaggaatggattcatcctgttgttgatagatctataaagatcgct
cttacaactagcgaacagatagtgagaaaagattttgcattggatccggacgagatgagg
atgcgaacagcggctcgtcatatggcgcgcaatctgacggctggtatggctatgatcacc
tgtcgcgatcagatccttgcatcaatcagtacgaatttgaaacaagcttttctttcggcc
ttaattaccacgactacccaacagaaggaggttgccgagcaagcggcgaatgtagtcgcg
gccgataacatggaactcgcgtgtgcattcgtacaaaagactgccattgagaaggcgata
cccgaaatggacaaacgcttactgaacgagatagaattacgtaaaatagctcgacaagaa
ggacgaagatattgcgatcctattatcaagtatcaagctgaaagaatgccagagcagatt
aggctgaaggtcggaggtgtaacgccccaacaaatggcggtttatgaagaattttctaga
aatattccaggattccaaccgctttccgagagggatacacaagcgctctttatgcctaaa
cctatttctgaaactcccgttaccgcgtttacgcccaactcagccgtgaccgtcgcggcg
gcacagcaggtggtggcttacgcagcggcagcggttagcaacgacgaagtaggtactatg
ctggagaagcttgctggtgaagtggaactgctattagctgctatgggaccggccgcaccg
cctcagcaaattactgctcttcacagtcttttggaatcgattattctcacgagaagatca
agagacactggcgctgctatgacattgttaaaaaaggctgtcgagggtcttctagatgga
cctctcatttccagcagcgtcatcgaatcggagaatctcatacagcgctacagagaagtg
catctacgtattttgaaatgtcttcaagatccgcgcgtatacggtatgcaatggaccaat
aagcacgtgactcgttgtctaaccgaatgcagagaagaatatcgctacaacttcgaagcc
gtggattatctcataaggtctcatttgataagtttgccgcagtatgatgcggctttagcg
caggctatagaaacaggaagcgctatggcaacggcattcgctatgcaattagttcagctg
tatctaattgatgagagacaggcgactcatgttaccgaaaccgacttgtttcatactatt
gaaacgttagctcgaatggctcatcacagaacaccaccagaaggaattctactcttcaga
ttgacaaatttagtagattcgctgcgcgcaaaccacgataccactggcatactggtagac
agagctccagcgggaccgacagcgcacattcactccgggatcctgcaggtgagagctcgc
gattttgacgatccacctggattaatggaaaagacggaatatctgttgcgcgaatgggtc
cagatgcatcacaatccgcagcatgctcgtgatcccactaaagcattcggcgcgtttgtg
caccaaatgaacattcacggaatcttaaagacagacgatctcatcacaagattcttcaag
ttgagtacacaaatgtgcgtggatctttgttatcgtgcgctctcggacaccacgtcagct
ccgactattttgcgtgcgaagtgtttccactccttggacgcgtttgttcgtctggtttcg
ctcttggtgaaacattcgggcgacgccaccaacacgcacaccaagatcaatctacttaac
aaggttctcggcatcgtagccggcgtgttgctgcaagatcatgaaatacgcggcaccgat
ttccaacaattaccgtaccacagaattttcattatgctgttcttggagttgtgcgcaccc
gaacctgtgttggaagccgtgaacttccaagtgttgacggccttttgtcacaccctgcac
atactgcgcccagcgaaggcatctggtttctgttacgcctggctagaactggtctcacac
cgtgtcttcattggacgtatgttggccatcacgccgcagcaaaagtgttgggggatgtac
gcgcaactcttgatcgatctgttcaagtatctcgcgccctatctacgtaacgcggaactc
gccaaacctgtgacaagtctgtacaaaggaacgctacgagtgttgttggtactgttacac
gacttccctgaatttctctgtgattatcattacgggttttgtgacgtgataccacccaat
tgtatacaaatgagaaatctgattctcagcgcgtttccgagaaacatgcgtctacccgat
cctttcacgccaaatctcaaggttgacttgttgcaggagatatcactcgcaccgcgagtt
ctttctaatttcgcgtccacaatacaaccattgaccttcaagaaagaactcgattcctat
ttgaaggcccgtgcgcccgtcacttttctgtctgaattgcgcagcaacttgcaagtgtcg
caggaagctggcgcgcgttacaacattcagctgatgaacgctttagtgctttatgtcgga
acacaggctataggatttatccgcaacaaaggccttactcccaacatgtccactatagca
cattccgctcacatggacatattccagaatctagccgtcgatctggacaccgaggggcga
tacttgttccttaatgctatagcgaatcaattgcgatacccaaacagtcacacgcattat
ttcagttgcgcacttctctatctgttcgccgaggcaaacacggaggcgatacaagaacag
atcaccagagtccttctcgaaaggttgatcgttaacagaccgcatccgtggggtcttctc
atcacctttatcgaattgatcaagaatcctacgtacaagttctggtcacacgaattcgta
cattgcgcaccagaaatcgaaaagttgtttgaatctgttgctcgatcttgtatggtgcaa
aaacaagtacctacaacggagacggagattccagagtga
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integrated database retrieval system
