Pseudomyrmex gracilis (graceful twig ant): 109858261
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Entry
109858261 CDS
T05003
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03040
Spliceosome
pgc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109858261
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109858261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgc03041
]
109858261
04121 Ubiquitin system [BR:
pgc04121
]
109858261
03400 DNA repair and recombination proteins [BR:
pgc03400
]
109858261
Enzymes [BR:
pgc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109858261
Spliceosome [BR:
pgc03041
]
Complex B
Other components
Prp19 complex
109858261
Complex C
Prp19-CDC5 complex
109858261
Ubiquitin system [BR:
pgc04121
]
Ubiquitin ligases (E3)
U-box type E3
109858261
DNA repair and recombination proteins [BR:
pgc03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
109858261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_HPS5
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR41
eIF2A
Beta-prop_DCAF4
Tricorn_2nd
Beta-prop_Nup120_160
B-prop_COPA_B_2nd
U-box
Beta-prop_ACSF4
RMC1_N
Cytochrom_D1
PAS_11
Motif
Other DBs
NCBI-GeneID:
109858261
NCBI-ProteinID:
XP_020290930
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MALSCAICNEVPEHPVISPVSGSIFERRLIEKYVAENGVDPISGRELNVKQLIDIKTTPI
VKPKPPSATSIPAILKNLQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGIAQATTIPQPAVAVEAGGTAAQPMEQAGITEDVIQKLQERA
TVLTQERKRRGRSVPDDLMPQESIRSFQTLASHPGLHSASVPGILALDIHGADTSKILTG
GADKNATVFNKDTEQVVAILKGHTKKVTRVIYHPEEDLVITASPDTTIRVWNVGTSQTTL
LLKAHDAPVTGLSLHPTGDYLLSSSLDQHWAFSDIRTGRLLTKVSGQAGQPLTTAQFHPD
GLIFGTGTADSQVKIWDLKEQSNVANFPGHTGPITAISFSENGYYLATAAEDSCVKLWDL
RKLKNFKTLQLEESYEVKDICFDQSGTYLAVAGTDVRVYLCKQWQELKVLNDHTAAATGV
RFGKHAQYIASTSMDRTLKLYGLS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcgctatcttgtgcgatctgtaacgaggttccagaacatccagtaatatctcctgtt
tcgggatcaatatttgaaagacgtctcatcgagaaatatgtggctgaaaatggtgtggat
ccaatcagtggcagggaactcaatgttaagcagcttattgatatcaaaacaactccaatt
gtcaaacccaaaccacctagcgcaacttctattcctgcaatattaaaaaacttacaagat
gaatgggatgctgttatgttgcactcttttacattgaggcagcaacttcaaactgcaaga
caggaattatctcatgccttgtatcagcatgacgcagcttgccgtgtgattgctagattg
accaaggaggtcactgctgctagagaagctctggcaactcttaaaccacaagctggaatt
gctcaagcgactacaatcccacaaccagctgtggcagtggaggctggtggtactgctgct
caaccaatggaacaagctggtattacagaagatgttattcagaagctacaggaacgtgcg
actgttctcactcaggagcgaaaacgacgtggtcgctcagtgccagatgatctgatgcct
caggagagtattcggtctttccagacccttgcatcgcatcctggactacattccgccagc
gttccaggaattctggcacttgatattcacggagctgacactagcaaaattttgacaggt
ggtgccgataaaaatgctacagttttcaataaagataccgaacaagtagtggcaattctt
aaaggtcacacgaagaaggttacacgagttatttatcatccagaggaagatcttgtgata
accgcatcgcccgacactacgattcgcgtgtggaacgtcggcacaagtcagacgaccttg
ttactgaaagctcacgatgctcctgtaaccggattgtctttacatccaactggtgattat
ctgctgagttcctctttggatcagcactgggctttctcagacatacgcactggcagatta
ttgactaaagtgtcaggacaagcaggacagccattgaccacagcgcagtttcatcctgac
ggtttaatcttcggtactggtacagcggactctcaagtaaagatatgggatctgaaagaa
cagtctaacgtggcgaacttcccgggtcacactggcccgatcacggcgatcagtttctcg
gaaaatggatattacctggctacggccgctgaagattcgtgcgtcaagctttgggattta
cgcaaactgaagaatttcaagactttgcaacttgaggaatcttacgaggtgaaggacatt
tgcttcgatcaaagcggaacttacttagcggtggcagggacggacgtcagggtgtatctc
tgcaaacagtggcaagaattgaaggttctaaatgatcacacggcggcggcaacgggtgta
cgctttggaaaacacgcgcaatacatcgcgtccaccagcatggatagaacattaaagctg
tacggattgtcataa
DBGET
integrated database retrieval system
