KEGG   Pseudomyrmex gracilis (graceful twig ant): 109860004
Entry
109860004         CDS       T05003                                 
Name
(RefSeq) PH-interacting protein
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pgc04121]
    109860004
Ubiquitin system [BR:pgc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     109860004
SSDB
Motif
Pfam: WD40 WD40_Prp19 Bromodomain WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_EIPR1 Auxin_resp Beta-prop_SPT8
Other DBs
NCBI-GeneID: 109860004
NCBI-ProteinID: XP_020294414
LinkDB
Position
Unknown
AA seq 1780 aa
MEASVYRNESGITPELYFLIAKFLAGGPCKKAAAVLRQELEHTEVLPRRLDWEGRVHGQT
FEELEKKYPHIKPDHLLQICARIGPVLEKQVPPCVPGAISLLGAGRQSLLRTHEDILRYV
RSVVYCSGRFGGKPFLERPGILSVPNIVRVLQGRENSGPLSRREAISPKFYNKMQMYRHT
LGHLSAVYCVLFDRTGQYVITGADDLLVKVWSSVDGRLLATFRGASAEIMDIAVNFDNTL
LAAGSLDRILRVWCFQTMSPVAVLSGHSGMITSVKFCPIACNGIYYLVSTSTDGSVAFWS
HTKKLNERAVFQSKPIQYNEKMRPGQAQMICASFSPGGAFMAAGSADHHVRVYAMLGDEG
PRRVLEVEAHSDTVDSIQWAHDGLKFISGSKDGTANVWHFEQQQWQHKQLFMTTKLPGEP
ETDDDSNKKAKVTMVCWDVSDEFLITAVNDYSLKVWGAKSGELMKILRGHKDEVFVLESH
PIDHRVILSAGHDGQLIIWDVLITEPIACFQNFVEGQGNCAVFDAKWSPDGTMLAATDSN
GHLLIYGFGSGVERMKIIPKELFFHTDYRPLIRDANNFVLDEQTQTAPHLMPPPFLVDVD
GNPYPPALQRLVPGRENCRGEQLVPNIAVGAGGMQEVIEGLPEQEPRSNIDQLIEELAQR
RNIGADGEAVGIGEDRENNIAEQHSVHNRQLASPRASRAGLRREGNVEGVRQSSGNWQRD
STTPWNKPLLARAMNPAVRETQTKTIHDIASMELECWRREMKRRPQPTSSTAANQNNMAN
KLGTRKCKRTTRHHYRTRAARGEEQEEEDYENDNGVTSATSVSNSNDSTAQEEDLCSYSS
SSSSTESSTEYSDWIADHGLSLEPPKRSKRKPVKKRSLTPPNDADRRRSRRPKKQEIAIA
NGIHEVPEVYRPSEWLTEVIPRKAPYYPQMGDEIVYFRQGHKFYLDAIRNKKVYELSPRC
EPWTKMTIRAQEYVKVVGIKYEIKPPRLCCLKLALMDEDGRLTGQNFTIKYHDMADVLDF
LVLRQTFEMALARSWSEGEKFRCMIDDGWWMGQIVGMEPLDEEFPDSFFMCFRVRWDNGE
YERMSPWDLEPIDENRLPVEVGGAVPVLPEERQAILYQPHPEEWPMGDREETCRRIIRGL
DQIMSLAIAEPFVAPVDLSLYPSYALIVQYPIDLSTIKARFENRFYRRITSAQFDVRYLA
ANAEQFNEPHSHIVKKARIVTDLCLRIIKEPTDIDVSAVYHQLNDTYHSSDSDLDIENKP
STSKQKPASSRKLRSQDLAQDWKMACRHLLETLWQCEDSIPFREPVDRLEHPEYHQIIDT
PMDLRTVKEDLLGGNYETPLEFAKDMRLIFINSRNYNTNKRSKIFSMTVRLSALFEEQMR
SVLSSWKSARRRNNNAKSKAKKKGKTQKGKHKLSNGTGHPKSKFTQSDDNLDSEDDDDED
KEQTKKHSDISAPGPSRMTNGHTRRSNSRPMLKLRISRSTVSKKAEDSYSDSDATTADVE
SSDSAPVRRTRARMAVPSVSADTDSGDDYTPSGRGRQVRKNRGKNIKNGKQFKSKVKPNV
IVDDDDDDDDDDDDEEEYVAESKKNKDEEEDEQFVMADSTEEESEDEKVVRRDTRSRKLV
TVKEENQKYTANNKKKKSDTESDNDDEEEQDEDDEEEEEEEEEEEEEEKEEQLQYEVNDQ
ESDDSDYSYKRLRSCRRNPKNAKQQQQQRSRRVSARKRPRYNEESDDSAALPVRNRRKIV
RRSYAEESDESLPEPGISISSRGRIRKMTPRARAYLLESP
NT seq 5343 nt   +upstreamnt  +downstreamnt
atggaagccagcgtgtacaggaacgagtccggaatcacaccagaactgtacttcctgatc
gcgaaatttttggcgggtggtccgtgcaagaaggccgccgcggtgctgaggcaagaattg
gagcacactgaggtgttacctcgacgtctcgactgggaaggacgtgtgcacggtcaaacg
ttcgaggaattggagaaaaaatatcctcacattaaaccggatcatttgttgcaaatatgt
gcgagaattggaccggtgttggagaaacaggtgccaccttgtgttcctggggcaatatcg
cttctgggagcaggcaggcaatctctgctgcgtactcacgaagatatcttgcgttacgta
cgcagcgtcgtctattgttccggaagatttggtggaaaacctttcctggaacgacctggt
attttgtcagtgcctaatatagtacgtgtacttcagggacgtgagaattccggcccttta
agccgaagagaggcgatttcgccaaagttttataacaaaatgcaaatgtatcgacataca
ttaggccatttatcggcagtatactgcgtgttgtttgatcgtaccggccagtatgttata
accggagcagatgatctgcttgtcaaagtttggagctcagttgatggacgattacttgct
acttttcgaggcgcgtctgcggaaattatggacatcgcggtgaacttcgataacactttg
ttggcagcgggaagtttagatcgaatattgcgagtctggtgtttccagacgatgtctcct
gtggcagttttgtccggacattcaggcatgattacgtccgtgaaattttgtccaatagct
tgtaatggtatttactatttggtctctaccagtactgatggatccgtagcgttttggtct
catacaaagaaactgaatgaaagagcagtatttcagtcaaaacctattcagtacaacgag
aaaatgagaccaggtcaagcacagatgatttgcgcgtcttttagtcctggtggtgcgttt
atggcagctggatctgctgatcatcatgttagagtttacgcaatgttgggtgacgaaggt
ccgcgcagagttctcgaagtcgaagcgcattctgatactgtcgatagcatccaatgggct
cacgatggtttaaaattcatttccggttcaaaagacggaacggcgaatgtatggcatttc
gagcaacagcaatggcaacacaaacaattgtttatgacaactaaacttcccggagaacca
gaaacggatgacgactcgaataagaaagcgaaagtaactatggtgtgttgggatgtgagc
gatgaatttcttattacggcagttaacgattattcgttaaaagtatggggagcaaaatcg
ggcgaactgatgaaaattttacgcggacacaaagacgaagtattcgtattagaatcacat
ccaatagatcatcgtgtgatacttagtgctggtcacgatggacaacttatcatttgggat
gtactaattactgaaccaatagcgtgttttcaaaactttgtcgagggtcaaggaaactgt
gctgtctttgatgcgaaatggtcaccagatggtacgatgctcgctgcgacagattctaat
ggtcatcttttgatttatggatttggatccggagtcgagagaatgaaaattatacctaag
gaattatttttccacacggattatcggcccttaatcagagatgcgaacaattttgttctt
gacgagcagacgcaaacagcgccgcatttaatgccgccaccatttttagtggatgtggac
ggaaatccttatcctccagcactgcagagattggttcctgggagagaaaattgtagaggc
gaacaattggtaccgaatattgcagttggcgctggtggaatgcaggaagttatagaaggt
cttccggagcaagagccaagatccaatattgatcaactgattgaagaactcgctcagagg
cgcaatattggtgctgatggagaagccgttggcattggcgaagatagagagaataacatt
gcggaacaacattcggtccataatcgtcaattggcgagtcctcgcgcgagcagagctggt
ctgagaagagaaggtaatgtcgaaggcgttcggcaaagtagcggcaattggcaaagggat
agtacaacgccttggaacaaacctcttctcgcgcgtgccatgaatccagctgttagagag
actcagactaaaacgattcacgatatagccagtatggaattagagtgctggcgacgggaa
atgaaacgacggccgcagcctacatcgagcactgccgcgaatcaaaataacatggcaaat
aaactcggaactcgcaaatgcaaaagaaccaccagacatcattacagaactagagcagcg
cgcggtgaagaacaggaggaagaagattatgagaatgataacggtgtcacgtcggcgact
tctgtcagtaacagcaatgactccactgctcaggaagaagatttgtgttcctatagcagc
agcagcagcagtacagaatcgagtaccgaatattccgattggatcgcagatcacgggtta
agtttggaacctcctaaacgtagtaaacgtaaaccagttaaaaaacggtctctcacacca
ccgaatgacgcagatcgaagacgcagtagacgtcctaagaaacaagaaatagcgatagct
aatggtattcatgaagttcctgaagtttaccgaccgtcagagtggcttaccgaagttata
ccgaggaaagcaccttattatccgcagatgggcgatgaaatcgtttatttcagacaaggc
cataaattttatttagatgcaattaggaataaaaaagtttacgagcttagtccgcgatgt
gaaccatggaccaagatgactattagagcgcaagagtatgtaaaagtagtaggtattaaa
tacgagataaagccgcctcgtttgtgttgtttaaaattagcattgatggacgaagatggc
cggcttaccggacagaattttaccatcaaatatcacgatatggctgatgtgttggatttc
ttagtgttacgtcagacttttgaaatggccttagcccgaagttggtccgaaggagaaaag
tttcgttgtatgatcgacgatggttggtggatgggacagattgtcggaatggaaccgttg
gatgaggaatttcctgattcgttctttatgtgctttcgcgtcagatgggacaacggagaa
tacgaacgaatgagtccttgggatctcgaacccattgatgaaaatagacttcctgttgaa
gtcggtggcgcagttcccgttttacctgaggaaagacaagcaatattgtatcaacctcat
ccggaagagtggcctatgggtgacagagaagagacttgtcgtcgaataatacgcggtctg
gatcagataatgagtcttgcaattgcagaaccgtttgtggcgccggtggatctcagtctt
tatccatcttatgccttaattgtgcagtatccgattgatttgtcgactataaaagctcgt
tttgaaaatcgtttctatagaagaatcacgtccgcacaatttgacgtcagatacttagca
gccaatgccgaacaattcaacgagccgcacagtcatatagtgaaaaaagcgcgaatagtc
accgatttgtgtttgcgtataataaaggaacctaccgacatagatgtttcggcggtatat
catcaattgaacgatacgtaccattcttcagactctgacttggatatagaaaataaaccg
tcaacgagtaaacaaaaaccagcatcaagtagaaagttacgctcacaagatttggcacaa
gactggaaaatggcgtgtcgtcatttgttggaaactctgtggcagtgcgaagattcaatt
cctttcagagaaccagttgatagattggaacatccagagtatcatcaaataatagacaca
ccaatggacttacgcactgtcaaagaggatttactaggtggtaattatgaaacgccattg
gaatttgccaaagacatgagattgatatttatcaatagtagaaattataatacaaacaaa
cgttcaaagatattttcgatgacagtaagattatcggctctgtttgaggaacaaatgcgc
tctgtactttcaagttggaaatccgcgcgtagacgtaacaataacgcaaagtcaaaagca
aaaaagaaaggaaaaacgcaaaaaggaaaacataaattaagcaacggcacaggacatccg
aaatcgaagtttactcagagtgatgataatttagacagtgaagatgacgatgatgaggat
aaggaacaaacaaagaaacattctgatatatctgcacctggaccttctcgaatgacaaac
ggtcacacgaggcgatccaattctcggccaatgttgaagctacgaatttcgagatcaacc
gtgtcgaagaaagcggaggacagttatagtgattctgatgcaacgacagcagatgtcgaa
agtagtgacagtgctcctgttcgacggactagagcaaggatggcagtgcctagtgttagt
gccgacactgattccggtgacgattacacacctagcggtcgtggcagacaggttcgtaag
aatcgcggtaaaaatattaagaacggcaaacagttcaagtctaaagtgaaaccaaacgtt
attgtggacgacgatgacgacgacgacgacgacgacgacgacgaggaggaatatgttgcg
gagagcaagaagaacaaggatgaagaagaagacgagcagtttgtcatggcggattcaacg
gaagaagaaagcgaggacgaaaaagttgtcagaagagacaccaggtcgcgtaagttagtg
accgtgaaagaagaaaaccaaaagtataccgctaataataaaaagaaaaaaagcgacacc
gaaagtgataatgatgatgaagaagaacaagatgaggatgacgaagaagaggaggaagaa
gaggaagaggaagaagaagaagagaaggaagagcagttacagtacgaagtcaacgatcag
gaatcagacgacagtgactattcgtacaaaagattgcgctcgtgtagacggaatccaaaa
aatgcgaaacagcagcagcaacaacgcagtaggcgagtctcggctcgtaaacgtcctcgt
tacaacgaggaaagtgacgacagtgccgcgctaccagtgaggaatcgacgtaagatcgta
cgtcgttcctacgctgaggaaagcgacgagagtctaccagagcctggcattagcataagt
agcagaggtcgtatacgtaagatgacaccacgtgcccgcgcttatcttctagagtcaccc
taa

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