Pseudochaenichthys georgianus (South Georgia icefish): 117445494
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Entry
117445494 CDS
T09629
Symbol
atf6
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 alpha
KO
K09054
cyclic AMP-dependent transcription factor ATF-6 alpha
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117445494 (atf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117445494 (atf6)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
117445494 (atf6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
Rab11-FIP3
Motif
Other DBs
NCBI-GeneID:
117445494
NCBI-ProteinID:
XP_033937108
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All DBs
Position
4:5059541..5108469
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AA seq
643 aa
AA seq
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MSTNLALYLENLQKDPGMDSETGIMSIDQGGEWDISLFDELDYMGDAEELLQALQHGSYA
NEGPDLDFDIDILPWKEVDGSSCTDGEVSVDSLSPAHTLSSAPSPGSVEALSPYFLQDEA
LSPQSQLSPVSFCSESSSYSVNSPPAKKAPKRNSQTARARQAQPIKRPIQIGPKVSIQPK
PLITAVPLAHAAPLQTKTIIIQPLQTTVLPVIKQAPICIQPAPPPGRPIVLSQPTQVLQI
QTAGAITANVVTMPTLTQDRPFPLAAPPSVSLTLRSPSSDDDSKISQRQQRMIKNRESAS
MSRKKKKDYLLTLEGRLKFALYENESLKSENGNLKRQLEGILSENTVLKVTAPKRRAVCL
MAVLVFVMLNVGPMGLFQGGPGSKLRDVSLQQGGRHLLAFSSEAETEAEMDPDSLGPGPS
ETGDSSEDKALMVVKDPILLRPPAPCQPPVNRTKCLELAHELRGWVHRHEVQQTKSRRMS
NGNHKPTRTILKAENKEDAQTLTVRYTDTPEEKNPGNELQVYYAPHHTYSDFFDELNRRG
DTFYVVSFRRDHLLLPATSHNKGSRPKMSVVLPAMNINDSIIRDKDYEVMMQIDCEVTNT
RIIHIRSSSIPPLLRVNRTETFYQHSPTDSQAPPPVNVLMGSA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccaacttggcgttatacttagaaaatcttcaaaaagaccccgggatggatagt
gaaacagggataatgtctatcgaccagggaggagagtgggacattagcctgtttgatgag
ctcgactacatgggagatgcagaagagctgcttcaggccctgcagcatggcagctatgcc
aatgagggtccagacctggactttgacattgacatactgccgtggaaggaagttgacggg
agcagctgcacagatggtgaggtgagcgtggactctctgtcacctgctcacactctgagc
tccgccccctcccctggctctgtggaggccctgtccccatacttcctacaagacgaggct
ctatctccacaatctcagctctctcctgtttccttctgctcagagtccagcagctattct
gtaaactctcctccagctaagaaagctccgaagaggaacagccagacggcgcgagccaga
caagctcagccaatcaagaggccgattcagattggcccaaaggtttccatccagccgaag
cccctgattacagctgtgcccctcgctcatgctgcccccctgcagacaaagacaatcatc
atccagcccctgcaaaccactgtgctgcctgtcatcaaacaagctccgatctgcatccaa
ccagcgccccctccaggacgtcccatagtgctgtctcagccaacccaggtgcttcagatc
cagacagcaggggccatcaccgccaatgtggtcaccatgccaacgctcacccaggacagg
cccttccccctcgctgctcctccgtcggtctcactcacgcttcgctccccttcctcagat
gatgattcaaagatctcccagaggcagcagcgcatgataaagaaccgcgagtcggcgtcc
atgtctcggaaaaagaagaaagactatctgctcacgctggaaggtcgcctgaaatttgcg
ctgtatgagaatgagtcgctcaagagtgagaatggcaatctgaagaggcagctggagggc
atactgagtgagaacacggtcctgaaggtaacggcgcccaagaggagagccgtgtgtctc
atggcggtgttggtgttcgtcatgcttaacgtgggaccaatgggtctgttccagggtggc
cctggctcaaagctcagagatgtgtccctgcagcaaggcggcagacacctgttggctttc
tcctcggaggcagaaactgaggctgagatggaccccgattctctcggccctggcccctct
gagacgggcgacagctctgaggataaagccctgatggtggtgaaggaccccatcctcctc
agaccccctgccccctgccagccccctgttaacaggaccaagtgcttagagctggcccat
gagttgcggggctgggtccaccgtcatgaagtgcagcagaccaaatccaggcgcatgagt
aacggcaatcacaaacccacaaggaccattctgaaagcagagaataaggaggatgcccag
actttgaccgtccgatacacagatactcccgaggaaaagaaccctggcaacgagctgcag
gtttactacgctcctcatcacacatacagcgacttcttcgacgagctgaaccgtcgcggc
gacactttctacgtggtgtctttccgcagggatcatctccttcttcctgccaccagccac
aacaaaggaagtcgaccgaagatgtctgtggtgttgccagccatgaacataaacgacagc
atcataagggacaaagactacgaggtgatgatgcagatcgactgtgaggtgacgaacacg
aggatcatccacatcaggtcgtccagcatcccgcctctgctccgggtgaatcgcaccgag
acgttttaccaacactctccgactgacagccaggccccgcctcctgtcaatgtgctaatg
gggtctgcttaa
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