Pseudochaenichthys georgianus (South Georgia icefish): 117445912
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Entry
117445912 CDS
T09629
Name
(RefSeq) high affinity choline transporter 1-like isoform X1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117445912
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117445912
Transporters [BR:
pgeo02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
117445912
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
117445912
NCBI-ProteinID:
XP_033937784
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Position
1:complement(7019657..7050121)
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AA seq
554 aa
AA seq
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MTLNVPGLVVMAGFYLLILGTGIWASFRSKKQEKKCSGNGMEITLLAGRNISLLVGIFTL
TATWVGGGFILGIAEAAYNPTLGAVWALMPVPYVLTFFLGGFFFARPMRENRYLTMMDPF
QQKYGNVMSSLLILPALVADVLWVARTLVSLGGTMSVILDLPYVYSIIISSVVAIVYTLM
GGLYSVAYTDVIQLILIFVSLWLCVPFLMTNPHSLDISLTAYNQTFQAPWVGTVELDQAG
KWFDDFMLLALGGLAYQAFYQRILSASSYTQAQVTCFASSGFCLVLGIPSILVGAVAAST
DWNSTAYGLPTPYERNQAGSILPIALQYLTPPYISIIGIGAVAAAVMSSMDSALLSSASL
FSSNIYKNILRKQASDREMQWVIRISVVVVGLAGTGLTFLDSSVLVFWLVGVDMSYTIMF
PQLVCVLFFKVSNAYGSLIGFMMGIILRFMSGEPLIGLPPLIEFPGYRLDAEGRQTQYFP
FRTAIMMLSLFSILLFSWLAAVIINKGLLPEKWDVFKINRKRKPSAGAAEAEKAKQAKEG
FSEAKQLLDNTTSF
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgactctcaatgtgccgggtctggtggtgatggcaggattctacctgctgatcttgggt
acaggcatctgggcctcctttcgctccaagaagcaggaaaagaagtgctctggaaatggc
atggagataacgctactggccgggcgcaacatcagcttgcttgttggcatcttcactctc
actgctacatgggtgggtggaggcttcatactcggtatagctgaggcggcatacaacccc
acactaggcgcagtgtgggctctgatgcctgtgccttatgtcctgaccttcttcttaggt
ggctttttctttgccaggccaatgagggagaacagatatttgacaatgatggaccctttc
cagcagaagtatgggaacgttatgagcagtttgctgatccttcccgctctcgtggccgat
gttctatgggtggcgcgcacactcgtcagcctgggtggaacaatgagtgtgatcctggac
ctgccctacgtctactccatcatcatctcctcagtggtggccatagtctacacactgatg
ggggggctctactctgtggcctacacagatgtaatccagctcatcctcatctttgtcagt
ctgtggttgtgtgtccctttcctgatgacgaaccctcactctttggacatctcactgaca
gcctacaaccagaccttccaggctccctgggttggcacggtggagcttgatcaggccgga
aagtggtttgacgacttcatgctgctggctctcggtggtcttgcctaccaggcgttctac
caacgaatcctgtccgcctcatcttacacccaggctcaagtgacctgcttcgcctcttca
ggtttctgcctggtgcttggtatcccttccattctggtgggagctgtggctgcgtctaca
gactggaactcaaccgcctatggattgcccaccccatatgagcgcaaccaggcaggttcc
atcctccccatcgccctgcagtacctcacacccccatacatctccatcattggcattgga
gcagtagctgctgccgtcatgtcttccatggactcagctcttctgtcctccgcatcattg
ttttcctcaaatatctacaagaacatcctcagaaaacaggcgtcggaccgtgagatgcag
tgggtgatccgtatctcggtggtggtggtgggtctggccggcactggcctcacctttctg
gacagcagcgtcctggtcttctggctggtgggcgtagatatgtcctacaccatcatgttc
ccacagctggtctgcgtcctcttcttcaaggtgtcgaatgcatatggatccctcattggc
ttcatgatgggaatcatcttaaggttcatgagtggtgagcccctcattggcctccctcct
ctcatcgagttccccggctaccgactggacgctgaaggaaggcaaacccagtacttcccc
tttcgcaccgctatcatgatgttgtcgctattttccatcctgctcttctcctggcttgca
gccgtcatcatcaacaaaggtctgctgcccgagaaatgggatgtattcaagatcaatcgc
aagcgaaaaccatcagcgggagctgctgaggccgagaaggccaagcaggctaaggaagga
ttctctgaggcaaagcagctactggacaataccaccagtttctga
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