Pseudochaenichthys georgianus (South Georgia icefish): 117446200
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Entry
117446200 CDS
T09629
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117446200 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117446200 (slc6a11b)
Transporters [BR:
pgeo02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117446200 (slc6a11b)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117446200
NCBI-ProteinID:
XP_033938121
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All DBs
Position
5:15164152..15184409
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AA seq
611 aa
AA seq
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MTAEKSGPVINGKPEDGRDPEGSSSSIEKGPYNERGQWNNKIEFFLSVAGEIIGLGNVWR
FPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETAMGQFTTEGGITCWRKICPLFEGIGYA
TQVIQAYLNVYYVVILAWAIFYLFNCFTTELPWAACGHYWNTENCADSYGENATNITNSN
STSPVIEFWERRVLKISDGIEHMGGMRWELAMCLALAWFICYFCIWKGPKSTGKVVYVTA
TFPYAMLLVLLVRGVTLPGAWTGIKFYLYPDMSRLSDPQVWVDAGTQIFFSYAICLGCLT
ALGSYNSYNNNCYKDCLMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIEAVAESGPGLA
FIAYPKAVTMMPLSPLWAGLFFLMLIFLGLDSQFVCVESLVTAVVDMYPDTFRRGYRREY
LILGMSVVSFLVGLIMCMEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYGSDRFYL
NIEDMIGFKPVFFIKWCWMILTPGICAGIFLFFLIKYKPLKYNNVYTYPDWGYGIGWFMA
MSSMVCIPLGMIWKIATTPGTFAERMKKLTTPSPDLKMRGKLNALSPYAANDAKLKVDAK
VSTISEKETHF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagaagagcgggcccgttataaacggtaaaccagaagatggcagagacccg
gaagggtccagctcaagtatagagaaggggccgtacaatgagaggggccagtggaacaac
aagatcgagtttttcctgtctgtggctggagagatcatcgggctgggcaacgtctggagg
tttccttacctctgctacaagaatggaggaggtgcgttcttcgtcccatatgtcatcttc
tttgtgtgctgcggtatacccgtgtttttcctggaaactgccatgggtcagttcaccact
gagggaggcatcacctgctggaggaaaatctgcccgctgtttgagggtattggctatgca
acgcaggtgattcaagcttatctaaacgtgtactatgtagtgatccttgcctgggccatc
ttctacctcttcaactgcttcaccaccgagctgccgtgggcggcctgcggtcactactgg
aacacagagaactgtgccgacagctatggagaaaatgccaccaacattacaaactccaac
tcaacctctccagtcattgagttctgggaacgcagagttctgaaaatatcagatggtatt
gagcacatggggggaatgcgctgggagctggccatgtgtctggcgctggcctggttcatc
tgctacttctgcatctggaagggacccaagtcaactggcaaggttgtgtatgtgacagct
acctttccttacgccatgctgttggtcctgctggtcagaggagtgacgctgccaggagcg
tggacggggatcaagttctacctctacccggacatgtcccgtctctctgaccctcaggta
tgggtagatgctggaacccaaatcttcttctcctatgccatctgcttgggttgtctcact
gctctgggaagttacaattcctacaacaataactgctacaaggactgcctcatgctgtgt
tgtttaaacagcggcaccagtttcgtagcaggttttgctatcttctctgtgctgggcttt
atggcctacgaacaaggtgttcccatcgaagctgtggcagagtctggtcctggtcttgca
ttcattgcataccccaaggctgttactatgatgcctctgtctccgctttgggccggcctc
ttcttcctgatgctcatcttcctcggtctggacagtcagttcgtgtgtgtggagagttta
gtgacagctgtggtggacatgtacccagataccttcaggagaggctatcgcagagagtat
ctgatcctgggcatgtccgtagtctccttcctcgtaggacttatcatgtgtatggaaggc
ggaatgtacgtcttccagctgtttgactcctacgctgccagcgggatgtgtttgctgttt
gtggccatatttgagtccatatgtatcggctgggtgtatggtagtgacagattctacctc
aatattgaggacatgattggcttcaaacccgtcttcttcatcaaatggtgttggatgatc
ctgaccccaggcatctgcgctggcattttcctgttcttcctgattaagtacaaaccgctg
aagtacaacaacgtgtacacctatcctgactggggctatggtatcggctggttcatggcc
atgtcctcgatggtctgcatccctctgggaatgatctggaagatcgcgacgactcctggc
acctttgctgagaggatgaagaagttgacgactcccagccccgacctgaagatgagaggg
aagctcaacgccctcagcccttacgctgccaacgatgcaaaactcaaggttgatgcgaaa
gtatccaccatctcagagaaagagacgcatttctaa
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