Pseudochaenichthys georgianus (South Georgia icefish): 117446232
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Entry
117446232 CDS
T09629
Symbol
rereb
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117446232 (rereb)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
117446232 (rereb)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
ELM2
GATA
DUF7952
CCDC47
Myb_DNA-binding
DUF7573
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
117446232
NCBI-ProteinID:
XP_033938187
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All DBs
Position
5:18974203..18986327
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AA seq
1203 aa
AA seq
DB search
MDDLFSPRRSLNSTQGEIRVGQSHQAKLPELQPRPVPSLQTQTEREDLMWTPGVNDCDLL
MYLRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNMLHASHYDAAKALQRLVKKPL
PKLIEKCWSEDDVKRFIKGLRQYGKNFFRIRKDFLPSKKTGELITFYYHWKKTPEAAGTR
AYRQQRRQPSSRKAKTRSAAVPVTPSLNYSVDASSASEDDLDSEDSEQEIKSCSHCGATS
SKDWHHGRRDTSLLCTTCHTHESKHGSLPPASKSAVAPFLFKPAKEEEEVNNKHGMRTRR
SRAPLSSLRSGHRRLTGSPTSEDQQSSSQPSPSGATSNSLRSSSTDNKNESSKKTNKKIK
EEVTSPKTTKRVRESPAQEPGEPEKVTPKRPKTQDPRGSRSEGEAEVEEESSSESRSAQD
DGSSDTKDIDQDNRSSSPSISSPQQGNESDSDSSAQPGGILPEPAAAAVGGPADPPAPQA
IPSQGHPILHQPPQSTPPADGAQSPSPDPPQPAAGQLAGPNARSQPALHALPLPPALPPA
LGPPALGQDCPLSPAFQVPPALNSAQPLQTHGPSAQALQRPPPFFRESQLPQPSLSGPQI
KPPPTTPIPSSHKQGPHNQSSTPFPQMPSNLPPPPALKPLNYLPNPHPPGAPPPPLQLMP
QPLPMQSLPTQLPVLSHVQTHPGKSMTSSHPPAAASLPLPPVTSSAIGPVPSLQPSYPPL
RPSPSAAAGCSQIQIKEEPLDEMEEAESPPPPSRSPSPEPTIINMASHASQSARFIKHLD
RGYNSCSRTDLFFTPLTASKLAKKREEAVEKLRRDAEHSARQEREREKDRERDREREADR
NAMSRASSSSHDSRMSDVQMTVHGHGRPSFEQPPTTVAAVPPYIGPDTPALRTLSHYARP
HVMSPSNRNHPFYVSLSPGDPLLAYHMPGLYGADPNLRERELRNLRERELHERMKPGYEV
KPPEMEMLHQSANPMEHFARHGAIGLPHIPGPPHHFAQFHPGLNHMERGMVLAAPQLRPE
LSYAERLTAERLHAERMASVGADPAARLQMLNVTPHHHQHSHVHSHLHLHQQDPLGQGDV
GAFHCYDERCQNPHPLDPLQGGPRLARYPFPGGQIPNALLGDLPHDHEMLRHPLFGAYQR
ELQGQIPQMSAAHQLQAMHAQSAELQRMAMEQQWLHAHHMHGGQLPSQEDYYSRLKKEGD
KPS
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctgttcagtccgcggaggagcctgaacagcacacagggagagataagagtg
ggacaaagtcatcaggccaaactcccagagttgcagccacggcccgttcccagtttgcag
actcagacggagagggaggatctgatgtggacgccgggggtcaatgactgtgaccttctg
atgtacctcagagcggccaggagcatggcagcgtttgcagggatgtgtgacggtgggtca
acagaggatggatgtcttgcagcctcccgtgatgataccacactcaacgcactcaacatg
ctccatgcgagtcactatgatgcagcaaaagctctccagcgcctggtgaagaagcctctg
ccgaagctcattgagaaatgctggtctgaggatgatgtgaaacgcttcatcaaaggcctg
agacagtatggaaagaatttcttccgcatccggaaagactttctgcccagcaaaaagact
ggggagctgatcacgttctactaccactggaagaaaactcctgaggctgcgggaactaga
gcttatcggcagcaacgtcgacagccgtcctctcgtaaagccaagactcgctctgcagca
gtccccgtaaccccatcgctgaattattcagtggatgcgagttctgccagtgaagacgat
cttgacagtgaagacagtgaacaggaaatcaagagctgcagccactgcggtgcaacaagt
tctaaggattggcaccatgggcggagagacacctcgttgctgtgcacgacctgccacacg
cacgaaagcaaacatggaagtctgccgccagcttcaaaatctgcagtcgctccattcctg
tttaaacctgctaaagaggaagaggaggtgaacaacaagcatggcatgaggacacgacga
agcagagcacctctttcatctttgagaagtggccacaggaggctcacgggctcccccacc
agtgaggatcagcagtccagcagccagccctcccccagcggagcgacttctaattcactg
agatcttcttccacagataataagaacgaatccagcaagaagacgaacaagaagataaaa
gaagaggtcacatcaccaaagacaacaaagcgtgtacgggagagtcctgcccaggagccg
ggagagcctgagaaagttactcctaaaaggccgaagacacaggatcctcggggctcgcgg
tccgagggcgaggccgaggtggaggaggagagctcttcagagagccgcagcgctcaggac
gacggcagcagcgacaccaaagacatcgaccaggacaaccgcagctcctcccccagtatc
tccagcccgcagcagggcaacgagagcgactccgactcctcggcccagcccggggggatc
ctgccagagccggctgctgctgctgtgggggggccggctgaccctccagccccccaggcc
atcccctctcagggccatcccatccttcatcagccaccacaaagcactcctcctgctgat
ggtgctcagagcccctctccggacccccctcagcccgctgccggtcagctagctggacca
aacgcccgctcacagcccgcccttcacgctctccctcttccgccagctcttccgccagca
ctcggtccgccagcactcggtcaggattgtcctctttctccagcatttcaggtcccccca
gctctcaactctgcacagcctctgcagacccatggcccgtcggctcaggccctccagaga
cccccacccttctttagggagtctcagctcccccagccttctctctctggccctcaaatc
aagccccctcccaccactccaatcccaagttcacacaaacagggtccacataatcagtct
tctacacctttccctcagatgccttccaatctcccccctccccctgctctgaagcccctc
aattatctgcccaacccgcatcctccgggcgccccgccgcccccccttcagctcatgcca
cagcctttgccaatgcagtcccttcctacccagctgccagtgctctctcatgtgcagacc
caccctggaaaaagcatgacttcctctcacccgccggcagcagcctcacttcctctccct
cctgtaacatcttctgctattggtccggtcccgagcctccagccgtcatatccacctctg
agaccctcgccgagcgcggcagcaggatgttcacaaattcagattaaagaagagccactg
gatgagatggaagaggctgagagcccaccgcctccatctcgcagcccctcgccggagccc
accatcatcaacatggccagccatgccagccagtctgcacggtttatcaaacacttggat
cgtggttacaactcctgttccagaacagacctgttcttcactccacttacggcctccaag
ctggccaagaaaagagaggaggcggtggaaaagttgaggagagatgctgagcacagtgct
cgacaagaacgtgaaagggagaaagaccgtgagagagacagagaaagggaggcagacaga
aatgcaatgagtagagcctccagctcctcccacgacagtcgtatgagcgatgttcagatg
acggttcatggccacggacgcccctcctttgagcagccgcccaccactgtggctgctgtg
cccccctacatcggccctgacacacccgccctgcgcaccctgagtcactacgcccgaccc
catgtcatgtcgccatcaaaccgcaaccacccgttctacgtgtcgctgagccccggcgac
cccctgctggcctaccacatgccgggcctgtacggcgctgaccctaacctcagagagcgc
gagctcaggaacctgcgcgagagggagctccacgagaggatgaagcccggctatgaggtc
aagcccccagaaatggaaatgctacaccaatctgccaaccccatggagcactttgccaga
cacggggccatcggtctcccccacatccccgggcccccccaccacttcgcccagttccat
cccgggctgaaccacatggagcgagggatggtgctggctgcgcctcagctgcgccccgag
ctgagctacgcagagcgactcactgcagagcggctccacgcagagaggatggcgtctgta
ggggccgaccccgcggccaggctgcagatgctcaatgtgacgccgcaccaccaccaacac
tctcacgttcactcccacctccacctgcaccagcaggatccgcttgggcaaggtgatgtt
ggagcttttcactgctatgacgaaagatgtcaaaaccctcatcctctggaccctctgcaa
ggaggcccacgtttggcccgctaccccttccccgggggccagatccccaacgctctactg
ggtgatctccctcatgatcatgagatgctgcgccacccactgtttggagcatatcaacga
gagctgcagggccagattcctcagatgtctgctgcccaccagctccaggcgatgcatgcc
cagtctgcagagctgcagaggatggcgatggagcagcagtggctgcatgctcatcacatg
catggaggccaactcccgagtcaggaagattactacagccgtctgaagaaagaaggtgac
aagccatcttga
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