Pseudochaenichthys georgianus (South Georgia icefish): 117449341
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Entry
117449341 CDS
T09629
Symbol
cacna1db
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D isoform X3
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
pgeo04020
Calcium signaling pathway
pgeo04218
Cellular senescence
pgeo04260
Cardiac muscle contraction
pgeo04261
Adrenergic signaling in cardiomyocytes
pgeo04270
Vascular smooth muscle contraction
pgeo04530
Tight junction
pgeo04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117449341 (cacna1db)
04020 Calcium signaling pathway
117449341 (cacna1db)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
117449341 (cacna1db)
09144 Cellular community - eukaryotes
04530 Tight junction
117449341 (cacna1db)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
117449341 (cacna1db)
09153 Circulatory system
04260 Cardiac muscle contraction
117449341 (cacna1db)
04261 Adrenergic signaling in cardiomyocytes
117449341 (cacna1db)
04270 Vascular smooth muscle contraction
117449341 (cacna1db)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117449341 (cacna1db)
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117449341 (cacna1db)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
117449341
NCBI-ProteinID:
XP_033942855
LinkDB
All DBs
Position
7:26548795..26669451
Genome browser
AA seq
2140 aa
AA seq
DB search
MKPQPSVCTTVPAPAGSLAQRKRQQYAKSKKQGGSTNSRPPRALFCLTLNNPIRRACISL
VEWKPFDIFILLSIFANCVALAIYIPFPGDDSNSTNQELETVEYAFLIIFTIETFLKIIA
YGLVMHQNSYVRNGWNMLDFVIVIVGLFSVVLEMITKDADSGGQSGGKPVGFDVKALRAF
RVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCY
MRQTGVLAEEEATPCAVSGHGRHCLLNGTFCREGWQGPNNGITNFDNFLFAMLTVFQCIT
MEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDF
QKLREKQQLEEDLKGYLDWITQAEDIDPENDEEGDEEGKRNRVTLADLTQKKKGKFGWFT
QSTETQASMPSETESANTENHNGEDKKSPCCGPLCQKISKSKFSRQWRRWNRFCRRKSRT
AVKSVTFYWLVILLVFLNTLTIASEHYNQPDWLTEVQDVANKVLLAMFTLEMLVKMYSLG
LQAYFVSLFNRFDCFVVCGGIVETILVELAVMSPLGISVFRCVRLLRIFKVTRHWASLSN
LVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGRFNFDETVTKRSTFDNFPQALLTV
FQILTGEDWNTVMYDGIMAYGGHASSGMVVCIYFIILFICGNYILLNVFLAIAVDNLADA
ESLNTAQKEEEEAKKRKNSIKEASIDKKRVAIIDIKDGDTKEPAEALLEEDKETYPAINT
PAGGDEEDNENLPEVPLGPRPLRLSELTIKEKTLPIPTGSAFFIFSSTNPFRVFCHKLIN
HHIFTNLILVFIMLSSVSLAAEDPIRNFSARNTILGYFDYAFTAIFTVEILLKMTAFGAF
LHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHV
VQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCADDAKSSPEECKGNYILFNN
GDTALPMVKERIWYNSDFNFDNVLMAMMALFTVSTFEGWPTLLYKAIDSHKENMGPIYNY
RIEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARP
LRRYIPKNPYQYKFWYVVNSTGFEYVMFVLIILNTLCLAIQHHGQSHLFNYAMDILNMVF
TGVFTVEMILKLIAFKPRGYVGDAWNVFDALVVIGSVVDIILSQSTAIPVVKVIVEPGNT
EDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVI
GMQVFGKIAMVDGTQINRNNNFQTFPQAVLMLFRCATGEAWQEIMLACLPGKLCDPESEY
NQGEERTCGSGFAIIYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKR
IWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFN
ATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFY
ATFLIQDYFRKFKRRKEQGLVGRRSWEKLNTTMALQAGLRTLHDIGPEIRRAISCDLQGA
GLVEADGEEEEDIYRRNGGLFGNHVNVGADQQGYSHPTTATQRPLQILPFSCGGSTGPTQ
TGRRASEGDAGEETEMNSSPIQYNHHYHSPHPYNNPHCIPTCHQSPIPSNANLNNANVPS
HLSMANGRQQKCLLGRDRPSSAKNRSSVSTYSRGVHNKLWKSHSTRTRYYEAYIRSESSS
GLYPTIRREESGGGDSDEERGSGEYFSGEEFQEDDIMVTKDRLFNRDQRDAEADLDHMVS
RGDQQPDGYFDDDQQPIYQDDRRSPRRWLLPSPQACTRPTFSFECLRRRSSQDDAPLSPS
CTALPLHLVHQQVMAVAGLDASRIHRRSPTRSLRSWVTPPASPINRDCSPCYTPLIQVDW
RSHGSVGSLPGAVKRSSWYTDGHDGPPSRSLSPSRLQLPAECCSHFLQNRGSAISVVEAV
LISEGLGKYAKDPKFVTATTNEIADACEMTIDEMESAASNLLNGSIGSCSTGATSSEGSD
SQAASQLRDSSIRDYSDEEPCVALKCEEDLTDEMICITSL
NT seq
6423 nt
NT seq
+upstream
nt +downstream
nt
atgaagccacagccctcagtttgcaccactgtaccagctcctgcaggttcactggcgcaa
aggaagaggcagcagtacgccaaaagcaaaaagcagggaggatccaccaacagcaggccg
ccccgagctctgttctgccttactctcaacaacccgatccgcagggcctgcatcagcctg
gtggagtggaaaccatttgatatatttatactgctgtctatttttgccaactgtgtggcc
ttagccatctacatccccttccctggagacgactccaactctaccaaccaagaactggaa
acagtagaatatgccttcctgatcattttcactatagagacatttctgaagattattgcc
tatggcctggtcatgcaccaaaactcctacgtcagaaacggctggaacatgctggacttt
gtcatcgtcatagtggggttgttcagtgtggttctagagatgataaccaaagacgctgac
tcgggcggccagtctggaggaaaacccgtgggctttgatgtcaaggccctccgagccttt
cgcgtgctacgacccctccgccttgtctctggagttcctagtttacaggtcgttttaaac
tccattattaaagccatggttcctctgctccacatcgctctgctggtcctctttgtcatt
atcatctatgccatcattggcctggagctcttcattggcaaaatgcacgccacatgctac
atgagacaaacaggtgtcctcgcggaagaggaggccacgccatgtgcggtgtctggtcat
ggccgccactgtttgctcaatggtacattttgcagagagggctggcaaggacccaacaac
ggtatcacaaacttcgacaactttttgttcgccatgctcactgtgttccagtgcatcacc
atggagggctggaccgacgttctctactggatgaatgacgcaatgggcttcgagctgccg
tgggtctactttgtcagtctggtcatctttggatccttctttgttctcaacttggttttg
ggagtgttgagtggagagttttccaaagagcgagagaaggccaaggctcggggagatttc
cagaagctacgagagaagcagcagttagaggaagacctgaaaggatacctggactggatc
acacaggcagaggacatcgaccccgagaacgatgaggagggagacgaggagggcaagcgt
aaccgggtcacgctggctgacctcacacagaagaagaaagggaagtttggctggttcacc
cagtccacagagacacaggcgagcatgcccagtgagacagagtcggcgaacacggagaat
cacaacggagaggataaaaaatcgccctgctgtggaccgctgtgtcaaaaaatatctaag
tcaaagttcagtcgtcagtggaggcggtggaaccgtttctgccgcagaaagagtcgaaca
gccgtgaaatctgtgacgttttattggctggtgatcctcttggtgttcctcaacactctc
accatcgcctctgagcactacaaccagccagactggctgacggaagtacaggatgtagcc
aacaaagttctcctggcgatgttcacgttggagatgctggtgaagatgtacagtttgggc
ctgcaggcatactttgtgtccctatttaaccgctttgactgtttcgtggtgtgcggaggc
atcgtagagaccatcctggtggagctggccgtcatgtctccgctgggtatctctgtattc
cgttgcgtacgacttctaaggatctttaaagtcacacgtcattgggcgtctctcagtaac
ctggtggcatctctgctaaactccatgaagtccatcgcctccctgttgctgctgctcttt
ctcttcatcattattttctccctgctcggcatgcagctatttgggggaaggttcaatttt
gacgagactgtgaccaaaaggagcacgtttgataacttcccccaggccctgctcactgtg
ttccagatcttgacaggagaagactggaatacagtgatgtatgacggcatcatggcgtac
ggtggacacgcctcttctggaatggtggtctgcatttacttcatcattctcttcatctgc
ggaaactacatcctgctgaatgttttcttggccatcgctgttgataacctggcagacgca
gagagcctcaatacagcacagaaggaggaagaggaggccaagaagaggaagaatagcatc
aaagaagcaagcatagacaagaagagagttgctataatagacatcaaggatggagatacc
aaggagccagcagaggctttgctggaggaggacaaggagacgtatcctgccatcaacact
ccagcaggtggcgatgaagaagataatgaaaaccttccagaagtcccgttggggccccgc
cccctgaggctgtctgaactcaccatcaaagaaaagactctgcccatcccaacgggaagc
gctttcttcatcttcagcagcactaacccgtttcgtgtgttctgccataaactgatcaac
catcatatcttcaccaatctcatcctggtcttcatcatgctcagctccgtctctctggct
gctgaggaccccattcgcaacttctctgctcgcaataccatacttggttattttgactat
gctttcaccgcaatctttactgttgagatcctgttgaagatgacagcgttcggagctttt
cttcacaaaggggcgttctgtagaaactacttcaaccttttagacctgctggtcgttggc
gtgtctctagtatccttcggcattcagtcctctgctatctcagttgtgaagattctccgt
gttttgagagtccttcgtccactcagggccatcaacagagccaagggactaaagcacgtg
gtccagtgtgtgtttgtggccatcaggaccatcggcaacatcatgatcgtcaccacgctg
ctgcaattcatgttcgcctgtatcggagtgcagctctttaagggtaaattttatcgttgc
gccgatgatgcaaagtccagcccagaagaatgcaaaggtaactacattctcttcaacaac
ggggacacagcgctgcccatggtgaaggagaggatctggtacaacagcgacttcaacttt
gacaatgtcctcatggccatgatggctcttttcaccgtctccactttcgaaggatggccc
actctgctctacaaggccattgactctcacaaggagaacatgggtccgatctacaactac
cgcatcgagatctccatctttttcatcatctacatcatcatcatcgccttcttcatgatg
aacatctttgtcggtttcgtcattgttacctttcaggagcaaggggagaaggagtacaag
aactgtgagctcgataagaaccagcgtcagtgcgtggaatatgctcttaaagctcgtcct
ctgcgccgctacatacccaaaaacccttaccagtacaagttctggtatgtggtcaactct
actggctttgagtacgtcatgtttgtcctaatcatcctcaacaccttgtgtctggccatt
cagcaccatggtcagtctcatctgtttaactatgccatggacatcctcaacatggtcttc
acaggggttttcactgtggagatgatcctcaaactcatcgcctttaaacccagaggctat
gttggggacgcctggaacgtctttgatgctctggtcgtgattggaagtgtagtcgacatc
atactgagccagtcgacagccattccagtcgtcaaggtgatagtggagcccgggaacaca
gaggacagcgctcgtatctccatcaccttcttccgcctgttcagagtgatgcgattggtc
aaacttctgagcaggggggagggcatcaggactctgctgtggaccttcatcaagtccttc
caggctctcccctatgttgcactcctgatagccatgctgttcttcatctatgctgtaatt
gggatgcaggtgtttggaaaaatagccatggtggatgggacacaaatcaaccgcaacaac
aactttcaaacttttcctcaagctgtcctgatgctcttcaggtgtgccacaggagaggcc
tggcaggagatcatgctggcctgtctgccggggaaactgtgtgatccagagtcggaatac
aaccaaggagaggagagaacctgcggcagcggcttcgccatcatctacttcatcagcttc
tacatgctctgtgctttcctgattatcaatctgtttgttgctgtcatcatggataacttt
gactatctgacccgtgattggtccattctgggaccgcatcaccttgatgagttcaaaagg
atctggtctgaatacgaccctgaagcaaagggcaggattaagcaccttgacgtggtgact
ctgctcaggaggatccagcctccgctgggctttggcaagctctgtcctcacagagtggcc
tgtaagcgtctggtggcaatgaacatgcccctcaacagtgacgggacggtcatgtttaat
gccaccttgttcgctctagtccgcactgctctcaagattaaaaccgaaggtaacctggag
caagccaatgaggagctcagagctgtgataaagaagatctggaagaggacgagcatgaag
ctgctagaccaagtggtgcccccagcaggcgatgacgaggtaacagtggggaagttctat
gccacattcctgatacaggactacttcaggaagtttaagcggcgcaaagagcaaggtctt
gtaggaaggcgctcgtgggaaaagctgaacacaaccatggctcttcaggctggcctgcgc
acgctgcatgacatcggaccagagatccgtcgagccatatcatgtgacctgcaaggggcg
gggctagtagaggctgatggagaggaagaagaggatatatacaggcgtaacggaggcctt
tttggtaaccatgtcaacgtgggtgcagatcagcaaggctactctcacccgaccaccgcc
acccagcggccgctacagatcttgcccttttcttgcgggggctccaccgggccaacccaa
acaggcaggagggccagcgagggcgatgcaggagaggagacggagatgaactcttcacct
atccagtacaaccatcattatcactccccccatccgtataataacccccactgtattccc
acctgccatcaatcgccaatcccctccaatgccaacctcaacaacgccaacgtgccctcg
catctctccatggccaatgggaggcagcagaagtgtttgttagggcgagaccgtccatcc
tctgccaaaaaccggtcatcagtgtccacctacagcagaggagtacacaacaagctttgg
aagtcacactccacaaggacacgctactatgaggcctacattagatcagagagcagcagt
gggctctaccccaccattcgtcgagaggagtcagggggcggagacagcgatgaagagcga
ggctcgggagagtactttagtggggaggagtttcaggaagacgacatcatggtcacaaag
gacagattgttcaacagggaccagcgtgatgcagaggcagaccttgaccacatggtttcc
aggggcgaccaacagcctgatggttactttgacgatgaccaacagccgatctaccaagac
gacaggcggtcacccaggagatggctcttaccctcgcctcaagcctgcacaagaccaaca
ttcagttttgagtgtcttcgtagaagaagtagtcaggatgatgctcctctctctccatcc
tgcacagctcttccactgcaccttgtacatcaacaggtgatggcggtggccggtctcgat
gccagcagaattcaccgccggtctccgacgcgatcactccgctcctgggtcacgcctcct
gcctcgcccatcaacagggactgctcgccctgctacacacctctcatacaggtggactgg
cgtagtcacggcagcgtgggtagcctccccggagcggtgaagaggagttcgtggtataca
gacggccatgacggtcctcccagccgcagtctctctccgtcccgcctgcagctgcccgca
gagtgctgctctcactttctgcagaatagaggaagcgctatcagtgtggtggaggctgtg
ttgatctccgagggtcttgggaaatatgccaaggaccccaagtttgtgacagcgaccaca
aacgaaatcgcagacgcctgcgagatgaccatcgatgagatggagagcgccgccagtaac
ctgctgaacggcagtataggtagctgcagcacaggggccacgagcagtgagggctcggac
tcgcaggccgcctcgcagctcagagacagcagcatccgggactacagcgatgaggagccc
tgcgtggctctgaaatgcgaagaggacctaacagatgagatgatatgcatcacatcccta
tag
DBGET
integrated database retrieval system
