Pseudochaenichthys georgianus (South Georgia icefish): 117450945
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Entry
117450945 CDS
T09629
Symbol
itgb3a
Name
(RefSeq) integrin beta-3a
KO
K06493
integrin beta 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03266
Virion - Herpesvirus
pgeo04081
Hormone signaling
pgeo04145
Phagosome
pgeo04148
Efferocytosis
pgeo04510
Focal adhesion
pgeo04512
ECM-receptor interaction
pgeo04517
IgSF CAM signaling
pgeo04810
Regulation of actin cytoskeleton
pgeo04820
Cytoskeleton in muscle cells
pgeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
117450945 (itgb3a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
117450945 (itgb3a)
04512 ECM-receptor interaction
117450945 (itgb3a)
04517 IgSF CAM signaling
117450945 (itgb3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117450945 (itgb3a)
04148 Efferocytosis
117450945 (itgb3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117450945 (itgb3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117450945 (itgb3a)
04810 Regulation of actin cytoskeleton
117450945 (itgb3a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117450945 (itgb3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117450945 (itgb3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117450945 (itgb3a)
04515 Cell adhesion molecules [BR:
pgeo04515
]
117450945 (itgb3a)
04090 CD molecules [BR:
pgeo04090
]
117450945 (itgb3a)
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117450945 (itgb3a)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117450945 (itgb3a)
Cell adhesion molecules [BR:
pgeo04515
]
Integrins
Integrin beta subunits
117450945 (itgb3a)
CD molecules [BR:
pgeo04090
]
Proteins
117450945 (itgb3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
PSI_integrin
EGF_2
EGF_TEN
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
117450945
NCBI-ProteinID:
XP_033944871
LinkDB
All DBs
Position
8:14998615..15009539
Genome browser
AA seq
812 aa
AA seq
DB search
MLRSEQAHREQRRVVSNRLRYSPAMGAFSDSLLILFLSLLSASNVFGSNICTSQGVTTCQ
HCLAVHPTCAWCSQEEYGKGGSGASRCDLKANLLKGGCSTDDLEFPSSTLNIQKDTPLSD
KASGTADDVTQIRPQKIHIALRPGDSQHFTVSVKQVEDYPLDLYYLMDLSYSMKNDLVRL
RTLGNELAVTMGRTTSNLRMGFGAFVDKTIFPYMHTHPPEALANPCFPHATCVAQFGFKN
VLSLTEKVARFTEEVKKQQVSKNRDAPEGGFDAIMQAVACKERIGWRPDASHLLVFTTDA
VTHIALDGRIAGIVQPNDGLCHLDQDNVYNKTAVLDYPSLAQMTEKMSQNNIKLVFAVTS
TVVPLYKEYSNLIPGSTVGLLSDDSGNVIQLISDAYARISSNVELELVGVPDELNLSFNA
TCLNGEVILGLKSCSGLKIGDTVSFNVEAQLRGCPKEKSRTFTIKPRGFRDSLEVTVDFS
CGCACEAEAQADSPLCSDGNGTYECGVCQCHKGRLGPTCQCSVEDYSPSDDANCNPKPGS
PICSGRGDCLCGQCSCHDNEFGQVWGKFCECDDFNCLRFKGALCSDHGKCGCGICQCDAG
WKGENCNCSTQIDTCMSRIGMLCSGRGYCECGVCQCTQPGAYGDTCEKCPTCPDSCTLKK
KCVECQHFERGQYTEDNSCSRICKDEIKVVEELVFHESNAAAVNCSYKDEDDCVVHFQYY
EDETGKSILFVIKEPECPQGPDILVVLMAVAGAILLLGIVGLLIWKLLVTIHDHGEYAKF
EEERSKAKWDTANNPLYKGATSTFTNVAYRGT
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgaagtgaacaagcccacagggaacagagacgggtcgtgtctaatcggctccgt
tactctccagccatgggagctttttcagacagtctcctgatactgtttctctctttgtta
tcggcatcaaacgttttcggttccaacatctgcacctcacaaggagtcaccacatgtcaa
cattgcttggctgttcatcctacgtgtgcctggtgctctcaggaggagtatggcaaggga
ggatccggggcgtcccgctgcgacctgaaggccaatctgctgaaagggggctgcagtaca
gatgatctggagtttccctccagcaccctgaatattcagaaggacacaccgctcagcgac
aaggcctctggcactgctgatgatgtcacacagataaggcctcagaaaatccatattgca
ctaagaccaggagactcccagcatttcacagtgtcagtgaaacaggtagaggattaccca
ctggacctctactatctgatggatctttcgtattcaatgaagaatgacttggttcgcctt
cgcaccttgggcaatgagcttgccgtgaccatgggccgcaccaccagcaacctgcgcatg
gggtttggagcctttgtggacaagaccatcttcccttacatgcacacccatcctccagag
gcattggcaaacccttgctttccgcacgccacttgcgtggctcaattcggattcaagaat
gtgctgtcactgacagagaaggtggctcgcttcactgaggaggttaagaaacagcaggtt
tctaaaaatagagacgctccggagggtggatttgatgccatcatgcaggctgtggcgtgc
aaggaaaggattggctggcgcccagatgcctcgcaccttttggtgttcaccactgatgcc
gttactcacatcgctctggatggacgtatagcaggaattgtccagcccaatgatggccta
tgccaccttgatcaggacaatgtttacaacaaaactgctgtgctggactatccctccttg
gcacagatgacagagaaaatgtctcaaaacaacattaaattagtttttgccgtgaccagc
acagtggtgccactttacaaggagtacagtaaccttattccaggctcaactgtgggattg
ctgtcggatgactctgggaatgttattcagctcatttcagatgcttatgcgagaattagc
tctaacgtggaactggagttagtgggagttccagatgagttgaatctgtccttcaatgcc
acttgtctaaatggagaggtcatccttggactcaagtcctgctccggcctcaaaattgga
gacacagtgtcattcaatgtggaggctcagttacgtggctgcccgaaggagaagagccgc
acttttactatcaaacctcgaggctttagggattccctggaggtaaccgtggacttttcc
tgtggttgcgcctgtgaggcggaggcccaagccgacagccccctctgcagcgacggcaac
gggacctacgagtgtggcgtgtgtcagtgtcataagggccgcctgggcccaacctgccag
tgctcagtggaggactacagtccgtctgacgatgccaactgcaacccaaagcctgggagc
ccaatctgcagcgggagaggcgactgtttgtgtggacagtgctcctgccatgacaatgag
ttcggccaggtgtggggcaaattctgcgaatgtgacgactttaactgcctgcgcttcaaa
ggggcactgtgctccgatcatgggaagtgtggctgtggcatctgtcagtgtgatgctgga
tggaaaggagaaaactgtaactgctccacacaaatagacacctgcatgtccaggattggc
atgctgtgcagtggccggggttactgtgagtgtggggtttgtcaatgcactcagccaggc
gcctacggagacacctgtgaaaagtgccccacctgtcctgattcctgtactttaaaaaag
aagtgtgttgagtgtcagcacttcgagagaggacagtacactgaagacaacagctgcagt
agaatctgcaaagatgaaattaaagtagtggaagaactggttttccatgagagcaatgca
gcagcagtgaattgctcgtacaaagatgaagacgactgtgttgtgcacttccagtattac
gaagatgaaactggcaaatccattctgtttgtgataaaagagccagagtgtcctcagggt
ccagacatcttggtggtgctcatggcggtggccggagctattttgctactgggcatcgtg
ggcctgctcatctggaagctgctggtcaccattcacgaccacggagagtatgccaagttt
gaggaagagagatccaaagccaaatgggatacggctaacaatcccttgtataaaggagcc
acatccaccttcaccaatgtagcgtaccgaggcacttaa
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