Pseudochaenichthys georgianus (South Georgia icefish): 117452936
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Entry
117452936 CDS
T09629
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03440
Homologous recombination
pgeo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117452936 (top3b)
03460 Fanconi anemia pathway
117452936 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgeo03032
]
117452936 (top3b)
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117452936 (top3b)
Enzymes [BR:
pgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
117452936 (top3b)
DNA replication proteins [BR:
pgeo03032
]
Eukaryotic type
DNA Topoisomerases
117452936 (top3b)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
117452936 (top3b)
FA (Fanconi anemia) pathway
117452936 (top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
117452936
NCBI-ProteinID:
XP_033947653
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All DBs
Position
9:6343483..6383228
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AA seq
853 aa
AA seq
DB search
MKTVLMVAEKPSLALSIAKILSKGNCTSRKGLNGACSVHEYPGSFQGQSVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLNMVKFLQVEARGCDYVVLWLDCDK
EGENICFEVLDAIQPVMNRVREQSVYRAKFSSITDTDIWNAMDHLGEPNRNEALSVDARQ
ELDLRIGCAFTRFQTKYFQGKYGNLDSTLISFGPCQTPTLGFCVERHDKIQSFKPETYWV
IQAKVFKGKDSPLTLDWSRVRVFDREVGQMFVNLAKTSRVAQVESVSKKEKAKQRPQALN
TVEMLKVASSSLGMSPQHTMQIAERLYIQGYISYPRTETTHYPEHFDLKGALKQQSSNPY
WAEEVKALLSTGLNRPRKGSDVGDHPPITPMRAASEGELGSDGWRLYDYITRHFIATVSQ
DCTYLQTTIDFTIGSEAFSCSGKTLISAGYTAVMPWQGIPLEEALPACERGDTFTVDEIK
LVEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNVCQRNYVTVENGRKLKPTNLGI
VLVHGYYKTDAELVLPTIRSAVEKQLSLISLGKANHQQVLQHTLDIFKRKFHYFVDSIPS
MDELMEVSFSPIAASGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGAIKLYK
ELRCPLDEFELVLWTSGPRGKSYPLCPYCFSNPPFRDMKKGMGCNECTHPSCQHSLNSLG
IGQCVECDGGVLVLDPTSGPKWKMACNTCNVVVHFFEHAHRVQVAQESCEACDASLVAVD
FNKTRTPLPAGETQHTGCVFCDPVFQDLVELKHATMRYRGGCARRGGRGRGRGRRGNPKK
PKDKMAALAAYFV
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgtcctgatggtggcagagaaaccgtccctggctctgtccattgccaaaatc
ctgtctaaaggaaattgtacaagtcgcaagggtctcaacggagcatgctcagtgcacgaa
taccccggcagcttccagggccaaagtgtacgctttaagatgacttctgtgtgtggacat
gtgatgagtctggatttcatcgggaagtacaacaactgggacaaggtggaccctgcagaa
ctctttagcaaagctccgacagaaaagaaggaggccaaccctaagctcaacatggtcaag
ttcctccaggttgaagcgagaggctgtgactacgtggtgctgtggttggactgtgataaa
gaaggcgagaacatctgctttgaggtactggatgccatccaaccagtgatgaaccgagtt
agggagcagagtgtttaccgagccaaattcagctccatcacggacactgacatctggaat
gccatggatcacctgggagagcccaaccgcaatgaagccctgtcagtggacgcacgtcag
gagctggacctgcgcatcggctgcgccttcacccggttccagaccaagtatttccagggt
aagtacggcaatctggactccaccttgatttcatttggaccatgccagaccccaacactg
ggcttctgcgtggaacgccatgataagatccagtcttttaaaccagagacttactgggtc
attcaggcaaaggtgttcaaaggaaaggacagccctctgacattggactggagcagggtc
agggtcttcgacagggaggtgggtcagatgttcgtcaacctggctaagacatcccgggtg
gctcaggtggagtcggtgagtaagaaggagaaggcgaagcagaggccccaggccctgaac
acagtggagatgctgaaagtggccagctcctccttaggcatgagtccccagcatacgatg
cagatcgcagagcgtctgtacatacagggctacatcagctacccccgcactgagaccacc
cactacccagagcactttgacctgaagggcgcgctgaagcagcagagcagcaatccatac
tgggcggaggaggtgaaggctctgctttcaactggactgaaccgtcccaggaaaggaagt
gatgttggagaccacccccccatcacccccatgcgcgctgcctccgaaggggagctggga
agtgatggctggcggctgtacgattacatcacacggcatttcatcgctactgtcagtcag
gactgcacgtaccttcagaccaccatcgactttaccatcggctcggaggccttctcgtgc
agtggcaagactctgatctcagcaggttacaccgctgtgatgccgtggcagggcatcccc
ctggaggaggccctgccagcctgtgagcgcggggacactttcacagtagacgagatcaag
ctggtggaaaaacagaccagcccccccgactacttgaccgaggctgaactcatcacactt
atggagaagcatggcattgggacggacgccagcattcctgtccacatcaacaacgtctgc
cagaggaactatgtgactgtagagaatggacgcaagttgaagccaaccaacctgggcatt
gttctagtgcatggctactacaagacagatgcagagctggtgctgcccaccatccgcagc
gctgtggagaagcagctgagcctcatctctctggggaaagccaaccaccagcaggtcctg
cagcacacgctggacatcttcaagaggaagttccactactttgtggattccatccccagc
atggatgagctgatggaagtgtctttctcccccattgctgcctccgggaagccgctgtcc
cgctgcgggaagtgccatcgcttcatgaagtacatccaggccaagcccagccggctgcac
tgctcccactgtgatgagacctacagtctcccccagaacggagccatcaagctgtacaag
gagctgcgctgtccgctagacgagtttgagctggtgctgtggacctcggggccccggggc
aagagctaccccctgtgcccgtactgcttcagcaacccgcctttcagggacatgaagaaa
ggtatgggatgtaatgaatgtacacatccgtcgtgtcagcactctctaaactctttgggc
attggacagtgtgtggagtgtgatggtggggttttggtgctggatcccacttctggacca
aaatggaagatggcctgtaatacatgtaacgtggtggtgcacttctttgaacatgcacat
agagtgcaggttgctcaggagagctgcgaggcctgcgacgcctctctggtcgcagtcgac
ttcaacaagactcgcacgccacttcctgccggggagacccaacacactggctgtgtgttc
tgtgatccagtgttccaggatctggtggagctcaaacatgccaccatgaggtatcgcggt
gggtgtgcgagacgaggaggacggggacgtggcaggggacgccgtggcaatccgaaaaaa
cctaaggacaaaatggcggccttggctgcatactttgtgtag
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