Pseudochaenichthys georgianus (South Georgia icefish): 117455988
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Entry
117455988 CDS
T09629
Symbol
tln1
Name
(RefSeq) LOW QUALITY PROTEIN: talin-1
KO
K06271
talin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04510
Focal adhesion
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117455988 (tln1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117455988 (tln1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117455988 (tln1)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117455988 (tln1)
Exosomal proteins of other cancer cells
117455988 (tln1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Talin_IBS2B
TLN1-like_RS
Talin_VBS2
I_LWEQ
VBS
Talin_middle
Talin_R4
FERM_f0
IRS
FERM_M
FERM_N
ACBP
RA_2
Vinculin
PH_SLA1
DUF7783
Gp18_domIII_N
Motif
Other DBs
NCBI-GeneID:
117455988
NCBI-ProteinID:
XP_033951567
LinkDB
All DBs
Position
12:complement(1501368..1585932)
Genome browser
AA seq
2541 aa
AA seq
DB search
MVALSLKIGVGNVVKTMQFEPSTMVYDACRIIRERVPEAQLGQPNDYGLFLSDEDPKKGI
WLEAGKALDYYMLRNGDTLEYKKKQRPLKIRMLDGTVKTVMVDDSKIVSDMLMTICARIG
ITNYDEYSLVRDIIEEKKEETTGTLKRDKTLLRDERKMEKLKQKLHTDDELNWLDHGRTL
REQGVEETEMLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACDFCG
YQCQIQFGDHKEDKHKPGFLDLKEFIPKEYIKNKGEKKIFQAHKNCQNMTEIEAKVSYVK
LARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDERTKEVIQEWSLTNIKRWA
ASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKSKDHFGLEGDEESTML
EDSVSPKKSTVLQQQFNRVGKVETGSVALPAIMRSGAGGPESFQRGSMPQAKQHITSGQM
HRGHMPPLTSAQQALTGTINCSMQAVQAAQASLDDFDTLPPLGTDAASQAWRKNKMDESK
HEIHSQVDAITAGTASMVNLTAGDPAETDYTAVGCAVTTISSNLTEMSKGVKLLAALMED
EGANGQQLLGAAKNLACAVSDMLKTAQPANTEPRQILLQAAGNVGQASGELLSHIGETDH
DPQFQDMLMQLAKAVANAAAALVLKAKNVAQKTEDSAQQNRVIAAATQCALSTSQLVACT
RVVAPTISSPVCQEQLIEAGKLVAKSVEGCVEASQGATQDEGLLKQVGFAATGVNQALNE
LLQHIKQYASGGHPIGRHGEATDRILDVTENIFSSMGDAGEMVRQARILAQATSDLVNAI
KMDAEGETDLENSRKLLSAAKLLADATAKMVEAAKGAAANPDSEEQQQKLREAAEGLRMA
TNAAAQNAIKKRLVNKLEHAAKQAAAAATQTIAAAQHAASSSKNHAAQQQLVQACKTVAE
QIPQLVQGVRGSQSQPDSPSAQLALISASQNFLQPGARMVTASKATVPTIGDQASAMQLS
QCAKNLASALAELRTTSQKAQEACGPLEIENALSTVRGLEKEIQEAKASAKAGILKPLPG
ETLEKSSQDLGSSTKAVSSAMAQLLSEATQGNENYTGMAARDVAQALKSLASGARAVAAT
TDDPAARNAILDCAGDVMDKSANLIEETKRAIAKPGDPESQQRLAQVAKAVSQALNRCVN
CLPGQRDVDNAIRTVGEASKALLSSSFPSSGRSFQEVQGQLNQVAAGLNQSANEVVQASR
GTTQDLSRATSKFGQDFSNFLDAGVDMAGTSQSKEDQTQVVSNLKTISMSSSKLLLSAKA
LSTDPSSPNLKNQLAAAARAVTDSINQLITMCTQQAPGQKECDNALRELESVRGMLENPT
EAVNDLSYFDCIDSVMENSKVLGESMAGISHHAKNSNLPEFGDSVSGGSKALCGLTEAAA
QAAYLVGVSDPNSSAGQKGLVDPSQFARANQSIQMACQNLVDPSCTQSQVLSAATIVAKH
TSALCNACRLASSKTPNPVAKRQFVQSAKEVANTTANLVKSIKALDGAFNQENREKCKAA
TGPLIEAVDNLTAFASNPEFASIPAQISPEGHAAMEPIVVAAKTMLESSTGLIQTARYLA
VNPKDPPKWSVLAGHSRTVSDSIKKLITNMREKAPGQRECDDSIEVLNGCIREVDQASLA
AISQQLTPREDISMEALHEQMAASVHEISNLIDPVGVAARSEASQLGHKVSQMVSYFEPL
IMAAIGTASKIVSSQQQMAVLDQTKTLTESALQMLYTAKEAGGNPKAAHMQEALEESVQM
MKEAVDDLGATLAEAASAAGAVGGMVDSITDSINKMQDSPDMEPEGTFVDYQTTMVKTAK
AIAVTVQEMVTKSNTNPDDLGGLANHLTNEFGNLADEAKYAAVTAENDEIGSHIKKQVGE
LGFSCTGLVTKAGALQCSPNDSFTKKELIESARKVSEKVSHVLASLQAGNRGTQACITAA
SAVSGIIADLDTTIMFATAGTLNRENAETFADHREYILKTAKALVEDTKLLVSGAGASQE
RLAQAAQSSVFTITKLADVVKLGAASLGSEDPETQVVLINAVKDVAKALGYLISSTKAAS
GKSHDDPSMLQLKNSAKVMVTNVTSLLKTVKAVEDEATKGTRALEATIEHIKQELAVFSS
SEPPPKTTTPEEFIRTTKGITMATAKAVAAGNSCRQEDIIATANLSRRAIADMLHSCKQA
AYHPEVSKDVQTRALRYGNECASGYLGLLEHVLVIIQKPSYDLKQQLASYSKRVAGSVTE
LIQAAEAMKGTEWVDPEDPTVIAENELFEAAAAIEAAAKKLEQLRPRTKPKEADESLNFE
EQILEAAKSIAAATSALVKAASAAQRELVAQGKVGAIQANAVDDGQWSQGLISAARMVAA
ATNNLCEAANSAVQGHASEEKLVSSAKQVSASTAQLLVACKVKADQDSQTMKRLQAAGNA
VKRASDNLVKAAQKAAFDAQDDQAVVVKSKMVGGIAQIIAAQEEMLRKERELEEARRKLA
TIRQQQYKFLPSELREDGQDQ
NT seq
7626 nt
NT seq
+upstream
nt +downstream
nt
atggtggccctgtccctaaagatcggtgtggggaacgtggtgaagaccatgcagtttgag
ccctccaccatggtgtacgacgcctgccgcatcatcagggagagagttcccgaggcgcag
ctcggccagcccaatgactacgggctgtttctgtccgatgaagacccaaagaaaggcatc
tggctggaggcgggcaaggccctggactactacatgttgaggaacggggacactctggag
tacaagaagaagcagaggcctctgaagatccgcatgctggacggcaccgtgaaaaccgtc
atggtggacgactccaagatcgtcagtgacatgctgatgaccatctgtgccaggataggt
attacaaactacgatgagtactcactggtgcgagacatcatcgaggagaagaaggaggag
accaccggcacgctgaagagagacaagactctgctgagagacgagaggaagatggagaag
ctgaagcagaagctccacacagacgatgagttgaactggttggaccacggccggacgctg
agggagcagggagtggaggagacggagatgttgctgctgagaaggaagttcttctactcg
gaccagaacgtggactccagagacccggtccagctcaacctgctctacgtacaggcccgt
gatgacatcctgaacggctctcatccagtctccttcgacaaggcctgtgatttctgtggc
tatcagtgtcagattcagttcggagaccacaaggaggacaaacacaagcctggattctta
gatttgaaggagttcattcccaaagagtacatcaagaacaaaggagagaaaaagatcttc
caggcacacaaaaactgtcagaacatgacggagatcgaggccaaagtcagctacgtgaag
ctggccagatccctgaagacctacggagtgtccttcttcctggtcaaggagaaaatgaag
ggcaagaacaaactggtgcctcgtctgctgggcatcaccaaggagtgtgtgatgagggtg
gacgagaggaccaaggaggtgatccaggagtggagcctgaccaacatcaagcgctgggcc
gcctcgcccaagagcttcactctggacttcggggactaccaggacgggtattactccgtg
cagaccactgagggcgagcagatcgctcagcttattgccggctacatcgacatcatcctc
aaaaagaaaaagagcaaagaccactttggcctggagggagatgaagagtccaccatgctg
gaagactccgtgtcacccaaaaagtccacggtgctgcagcagcagttcaaccgggtgggg
aaggtggagacgggctccgtggctctgccggccatcatgaggtccggagccggggggcca
gagagtttccagaggggctccatgcctcaggccaagcagcacatcaccagcggacagatg
caccgaggacacatgccccctctgacttcagctcagcaggctctgacaggaaccatcaac
tgcagcatgcaggcggtgcaggcggcccaggcctctctggacgacttcgacacgctgccg
cccctgggaactgacgctgcatcccaagcctggcgcaaaaacaaaatggatgagtccaaa
catgagatccactcccaggtggatgccatcacagccggcacagcatccatggtgaacctg
actgcaggcgacccagcagagacggactacacggcggtgggctgcgccgtcaccaccatc
tcctccaacctgacggagatgtcaaagggagtgaagctgctggcagcgctgatggaggac
gaaggggccaacgggcagcagctgctgggagccgccaagaacctggcctgcgctgtgtcc
gacatgctgaagaccgcccagcctgccaacaccgagcctcgtcagatcctgctgcaggct
gcaggcaacgtgggccaggccagcggagagctgctgtctcacatcggagagacggaccac
gacccacagttccaggacatgctgatgcagctggctaaagcggtggcgaacgcagcagcc
gctctggtgctgaaagccaagaacgtggctcagaagacggaggactcggcccagcagaac
cgggtcatcgctgccgccacgcagtgcgccctgtccacctctcagctggtggcctgcacc
agggtggtggctccgaccatcagctccccggtgtgccaggagcagctgatcgaggcgggg
aagctggtggccaagtcggtggagggctgcgtggaggcatcgcagggggccactcaggac
gaggggctcctgaaacaggtgggctttgctgccacaggcgtcaatcaggccctcaacgag
ctgctgcagcacatcaagcagtacgccagcggaggacatcctattggacgccacggagaa
gccaccgaccgcatcctggacgtcactgagaacatcttcagctccatgggagacgctggt
gagatggtccgtcaggcccgtatcctcgcccaggccacctccgatctggtcaacgccatc
aagatggacgccgaaggagagaccgacctggagaactcacgcaagcttctgtccgccgct
aagctgctggctgatgccaccgccaagatggtggaggctgcgaagggtgcagcagcaaac
cccgacagtgaggagcagcagcagaagcttcgagaggcagctgaaggtctgcgtatggcc
accaacgctgccgcacagaacgctatcaagaaacgcctggtcaacaagctcgagcatgca
gccaaacaggcagcagctgcggccactcaaaccatcgctgccgcccaacacgcggcctcc
tccagcaagaaccatgcggcgcagcagcagctggtccaggcttgcaagacggtggcagag
cagatccctcagctggttcagggggtccggggcagccagtctcagcccgacagcccgagt
gctcagctggccctcatcagtgccagccagaacttcctgcagcctggtgctaggatggtg
acagcctccaaggccacagtccccaccatcggagaccaggcttcagccatgcagctcagt
cagtgtgctaagaacctggccagtgctctggctgagctccggaccacctcacagaaggct
caggaggcgtgcggtccgttggagatagaaaacgctctgtccactgtacgaggtctggag
aaggaaatccaggaggccaaggcttcagctaaggcggggatactgaaaccactgccagga
gagacgctggagaagtcctctcaggatctgggtagcagcactaaggcagtgagctcagcc
atggcccagctgctgagcgaggccacgcagggcaacgagaactacactggcatggcagcc
agagatgtggcccaggccctgaagtctttggcctcgggggcccgagccgtcgccgccacc
accgacgacccggcggcacgcaacgccattctggactgcgccggagacgtcatggacaaa
tcagccaatctgatcgaagagaccaagagggccatcgccaagcccggagacccagagagt
cagcagcgactcgcccaggtggctaaggccgtgtctcaggccctgaacaggtgtgtgaac
tgccttcctggccagagggatgtggacaacgctatccgaactgtgggcgaagccagcaag
gctctcctgtccagctctttcccgtccagcggcagaagcttccaggaggttcagggtcag
ctcaaccaggtggcggccggtctgaaccagtctgccaacgaggtggtgcaggcctccaga
gggaccacgcaggacctctcccgcgccactagcaagttcggacaggacttcagcaacttc
ctggatgctggtgtcgacatggcgggaacatcccagtctaaagaggaccagacccaggtg
gtgtccaacctgaagaccatctccatgtcctccagcaagctgctgctgtcggccaaagcc
ctgtccacggaccccagctcccccaacctgaagaaccagctggcagccgccgctcgggca
gtgacagacagcatcaaccagctcatcaccatgtgcacccagcaggctccgggtcagaag
gagtgcgacaacgctctccgagagctggagtctgtgagggggatgctggagaacccgaca
gaggccgtcaacgatctgtcctacttcgactgcatcgacagcgtcatggagaactctaag
gtcctcggggagtcgatggctggtatttcccaccatgccaagaactccaacctgccagag
ttcggagactcggtcagcgggggctccaaagctctgtgtggtctgacggaggcagcagct
caggctgcctacctggtgggggtgtcggaccccaacagctcagcgggtcagaagggtctg
gtggatccgtcccagttcgcccgggctaaccagtccattcagatggcctgccagaacctg
gtggacccctcctgcacacagtcacaggttctctctgcggcgaccatcgtggccaaacac
acgtccgccctgtgtaacgcctgccgcctggcctcctcaaagacccccaaccccgtcgcc
aagaggcagttcgtccagtcagccaaagaggtggccaacaccaccgccaacctcgtcaag
tccatcaaggctttggacggagcgttcaaccaggagaacagagagaagtgtaaggctgcc
accggcccgctgatcgaagccgtggacaacctgaccgccttcgcatccaacccagagttc
gccagcattcctgctcagatcagcccagagggtcacgcagccatggagcccatcgttgtg
gcggcgaagacgatgctggagagctcgaccggcctcatccagacggcccgctatctggct
gtgaaccccaaagacccccccaagtggtccgtgctggcaggacactccaggaccgtgtct
gactccatcaagaagctcatcaccaacatgagagagaaggctcctggacagagagagtgc
gacgattctattgaggttctgaacggctgcatccgagaggtggaccaggcgtctctggca
gccatcagccagcagctcaccccccgagaggacatctccatggaggctctccatgagcag
atggctgcctctgtccatgagatcagcaatctgatcgatcctgtgggcgtggccgctcga
tctgaagcctctcagctgggacacaaggtgtctcagatggtcagctactttgagcccctg
atcatggccgccattggcacggcctctaagatcgtcagcagccagcagcagatggccgtg
ttggaccagaccaagaccctgactgagtccgccctgcagatgctgtacacggcgaaggag
gctggaggaaaccccaaggcggctcacatgcaggaggccctggaggagtcggtgcagatg
atgaaggaggcggtggacgacctgggggccacgctggcggaggctgccagtgcagcgggg
gccgtgggggggatggtggactccatcaccgactccatcaacaaaatgcaagactcccct
gacatggagcccgaaggcaccttcgtggactaccagaccaccatggtgaagactgccaag
gccatcgcggtcaccgtgcaggagatggtgaccaagtctaacaccaaccccgatgacctc
ggaggattggccaaccacctgaccaacgagtttggaaatctcgcagatgaggccaaatat
gcagccgtcaccgcagagaatgatgaaattggatcccacattaagaagcaggtgggggag
ctgggcttcagctgcaccgggctggtcactaaagccggagctctgcagtgcagccccaac
gactcgttcaccaagaaggagctgatcgaaagcgcccgcaaagtctccgaaaaggtgtcc
catgtgttggcgtccctgcaggccggtaaccgtggcacccaggcctgcatcaccgccgcc
agcgccgtgtcggggatcatcgccgacctcgacaccaccatcatgttcgccaccgcagga
acgctgaaccgagagaacgccgagaccttcgccgaccacagagaatacatcctgaagaca
gccaaggctctggtggaggacaccaagctgctggtgtctggagccggagccagtcaggag
agactggcccaggccgcccagtcctccgtcttcaccatcaccaaactggctgatgtggtc
aaactgggagccgccagcctgggatctgaagacccagagacccaggtggtcctgatcaac
gcagtgaaagacgtggccaaagctctggggtacctcatcagctccaccaaggccgcttca
ggcaaatctcacgacgaccccagcatgctgcagctgaagaactctgccaaggtgatggtg
accaacgtgacgtccctcctgaagacggtgaaggcggtcgaggacgaagccaccaaaggg
accagagctctggaggcgaccatcgaacacatcaagcaggagctggctgtgttcagcagt
tctgagcctccgccgaaaaccaccacacctgaggagttcattcgcaccaccaaaggaatc
accatggcgacagcaaaggcagtggctgctgggaattcttgtcgtcaggaagacatcatc
gccacggccaacctcagcaggagggccatcgctgacatgctgcactcctgcaagcaagct
gcgtaccacccagaggtcagcaaggacgtccagacgagagcgctgcgctacggcaacgag
tgtgcgtctggatatctgggtctgctggagcatgtgctggtgatcatccagaagccctct
tatgacctgaagcagcagctggcctcctactcaaagcgagtggcaggctccgtcactgag
ctcatccaggctgcagaggccatgaaaggcactgagtgggtggaccccgaggaccccacc
gtcatcgcggagaacgagctgtttgaagcggcggccgcaattgaagccgccgccaagaaa
ctggagcagctgaggccccgcaccaagcccaaggaagcagatgagagcctgaacttcgag
gagcagattctggaggcggctaagtccatcgcagcggccaccagcgctctggtgaaagca
gcttcagcagctcagagggagctggtggcgcaagggaaggttggagcgatccaagccaac
gctgtggacgatggccagtggtcccagggtctgatttctgccgctcgcatggtcgcagcg
gccaccaacaacctgtgtgaggccgccaactcggcggtgcagggccacgccagcgaggag
aagctcgtgtcctccgccaagcaggtgtccgcctccaccgcccagctgctggtggcctgc
aaagtgaaggccgaccaggactcccagaccatgaagaggctgcaggcggctggaaacgct
gtgaagagagcctctgataacctggtgaaggcggcgcagaaagcagcgttcgacgctcag
gacgaccaggctgtggtggtgaagagcaagatggtggggggcatcgctcagatcatcgcg
gctcaggaggagatgctgcggaaagaaagggagctggaagaggcccggaggaagctggcc
acgatcagacagcagcagtacaagttcctcccctcagagctgagagaggacggccaggac
cagtga
DBGET
integrated database retrieval system
