Pseudochaenichthys georgianus (South Georgia icefish): 117458050
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Entry
117458050 CDS
T09629
Name
(RefSeq) polyubiquitin-C-like
KO
K08770
ubiquitin C
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03320
PPAR signaling pathway
pgeo04120
Ubiquitin mediated proteolysis
pgeo04137
Mitophagy - animal
pgeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117458050
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117458050
04137 Mitophagy - animal
117458050
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117458050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117458050
Ubiquitin system [BR:
pgeo04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117458050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
117458050
NCBI-ProteinID:
XP_071061464
LinkDB
All DBs
Position
14:complement(27809030..27814785)
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AA seq
720 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGRRVVCSTSYPVPLATAQSERGVSE
GRLDTETNWANMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ
LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK
EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV
EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctcactggcaaaacaatcaccctagaggttgagcccagt
gactccattgagaatgtcaaagctaagatccaggataaggaaggcattccccccgaccag
caaaggctgatctttgctggcaagcagctggaagatggccgcactctctctgactacaac
atccagaaggagtccaccctccaccttgtcctccgtctgaggggaggcatgcagatcttt
gtgaagaccctcactggcaaaactatcaccttggaggttgagcccagcgacagtattgag
aatgtgaaggctaagatccaggacaaggaaggcattccccccgaccagcagaggctgatc
tttgctggtaagcagcttgaggatggccgcacactctccgactacaacatccagaaggag
tccaccctccaccttgtccttcgtctgaggggaggtatgcagatcttcgttaagaccctc
actggcaagaccatcaccctggaggttgaggcaagtgactccattgagaacgtgaaggct
aagatccaggacaaggaaggcattccccccgaccagcagaggctgatctttgccggcaag
cagcttgaggatggccgcacactctccgactacaacatccagaaggagtcgaccctccac
cttgtcctgcgtctcaggggaggcatgcagatatttgtgaagaccctcaccggcaagacc
atcaccctggaggttgaggcaagtgacaccattgagaacgtgaaggccaagatccaggat
aaggaaggtattccccccgaccagcagaggctgatctttgccggcaagcagcttgaggat
ggccgcacactctccgactacaacatccagaaggagtcgaccctccaccttgtcctgcgt
ctcaggggaggcatgcagatctttgtgaagaccctcaccggcaagaccatcaccctggag
gttgaggcaagtgactccattgagaacgtgaaggccaagatccaggataaggaaggtatt
ccccccgaccagcagaggctgatctttgccggcaagcagcttgaggatggccgcacactc
tccgactacaacatccagaaggagtcgaccctccaccttgtcctgcgtctcaggggaggc
atgcagatatttgtgaagaccctcaccggcaagaccatcaccctggaggttgaggcaagt
gacaccattgagaacgtgaaggccaagatccaggacaaggaaggtattccccccgaccag
cagaggctgatctttgccggcaagcagcttgaggatggccgcacactctccgactacaac
atccagaaggagtcgaccctccaccttgtgctgcgtctgaggggcgggcgacgtgtagtc
tgcagtacaagttatcctgtccccctggcaactgcacagtcagagagaggtgttagtgag
ggacgactagataccgaaacaaattgggcaaacatgcagatctttgtgaagaccctcact
ggcaagaccatcacccttgaggtcgagcccagtgacaccattgagaatgtcaaagctaag
atccaggacaaggaaggcattccccccgaccagcagaggctgatctttgccggcaagcag
ctggaggatggccgcactctctctgactacaacatccagaaagagtccaccctccatctg
gttcttcgtctgagaggaggcatgcagatctttgtgaagaccctcactggcaagaccatc
acccttgaggtcgagcccagcgacaccattgagaacgtgaaggccaagatccaggacaag
gaaggcattccccccgaccagcagaggctgatcttcgctggcaagcagcttgaagacggc
cgcaccctctctgactacaacatccagaaggagtccaccctccaccttgtcctgcgtctc
agaggaggtatgcagatctttgtgaagactctcactggcaagaccatcaccctggaggtt
gagcccagcgacaccattgagaatgtcaaagctaagatccaggataaggaaggcattccc
cccgaccagcagaggctgatctttgctggaaagcagctggaggatggccgcactctctct
gactacaacatccagaaggagtccaccctccacctcgtcctgcgtctgaggggcgggcaa
taa
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