Pseudochaenichthys georgianus (South Georgia icefish): 117462328
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Entry
117462328 CDS
T09629
Name
(RefSeq) extended synaptotagmin-2-like isoform X1
KO
K28063
extended synaptotagmin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117462328
Membrane trafficking [BR:
pgeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
117462328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMP_LBD
C2
SMP_MUG190-like
cPLA2_C2
PDZD8_N
CS_DNAAF11_C
DUF5049
Motif
Other DBs
NCBI-GeneID:
117462328
NCBI-ProteinID:
XP_033960397
LinkDB
All DBs
Position
17:41088226..41157159
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AA seq
937 aa
AA seq
DB search
MTNRMEGSSAPGAKANGPIAAPSNPTSSKIGPPLSPEDLDDGPQSSLTDVTQMWITFVKT
FAIILPIYVMGYFEFSFSWVLIGLAMLFYWRKHHGTKDYRINRALAYLDHEDKVLKQSVP
TSDLPPWVHYPDVERVEWLNKTVKQMWPFISQFVDKLFRETIEPAVKAANPHLSSFCFTK
IDLGDKPLRVNGVKVYTENVDKRQVIMDLQISFVGNTEIDVDIKKYYCRAGIKSIQLHGT
LRVVMEPLLGDMPLIGALSVFFLKKPLLDINWSGLTNMLDIPGVSGLCDNIIQDVIYSFV
VLPNRITIPLVGEAQLAQLRFPIPQGVLRIHFIEAQELLGKDKFLGGLIKGKSDPYGVIK
VGTHLFQSKVIHETVNPKWNEVYEALMYEHAGPNMLEIELFDEDTDKDDFLGSLMIDVAE
LQKEQNVDEWFVIEDVATGKIHLKLEWLSLLPSPEKLDQALTSIKADRNQANDGLSSALL
VVFLDSARNLPSVFEGNLGSGYLKERRAAGLVFCENTASLYRTLFRNPLEFNQSGLRKTS
VSKALKSGKKVTSDPNPFVQFRVGHQSYNSKIRYKTNEPVWEEAFTFLIHNPRSQELEVE
VKDEKHECTLGVLTVPLTRLLEAEEMTLNERFPLNNSGPSCALKMKMALRVLSLDKTPSS
DPSSDPSADPPSLQANKNKKTNPQHAASSSDSPVPPSSTFDIPRSASVSAQDALNRRKEA
NDPYRSVGSTDLGQGGRGGGGGLAQSGRSSSNLAISGSQQYLAGGKELTPSIASDISNPY
ATQELQQRLALLQNGSGPGHFPLGEIQLTIRHSSQRNKLIVVVHGCRNLIAFTDHGSDPY
VRLYLLPDKRRSGRRKTHTFKKTLNPVYDQTYEFSVSLVELHRRTLDVAVKNGGGLLSKH
KGLLGKVLVDLTYEDTSKGWTQWYELSEDGLTKPQQL
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgactaacaggatggagggttcttcagccccaggagccaaggcgaacggacccattgca
gcgcccagcaacccaacaagctccaaaatcggtccgccactgtccccagaagacctggac
gacgggcctcagtcttctctgactgatgtcacccaaatgtggattacattcgtcaagact
ttcgccatcatcttgcccatctacgtcatgggatactttgagttcagctttagttgggtt
ctgattggactcgccatgttgttctattggaggaaacaccatggcactaaggactacagg
ataaaccgagccttagcatacctggaccatgaggataaagtattgaagcagagtgtgcct
acttcggatctaccaccatgggtccattatccagatgtggaaagagtggagtggctgaat
aagacggtgaagcagatgtggccgttcatcagccagtttgtggacaagctattcagagag
accatcgagccggcagtgaaggccgcaaaccctcacctcagctccttctgctttaccaag
atcgacctgggcgacaagccgctaagagtgaacggggtgaaggtttacacagagaatgtg
gacaagaggcaggtcatcatggatctgcagatcagttttgtggggaatacagagattgac
gtggacatcaagaagtactactgcagagcgggaatcaagagtattcagctccatgggacg
ctgagagtggtgatggagcctctgctgggagacatgcctctgatcggagcgctgtccgtc
ttcttcctcaagaaaccattgctggacatcaattggtcgggactcacgaacatgctggat
attcctggtgtcagtggtttgtgtgataacatcatccaggacgttatctacagcttcgtc
gttcttcccaaccggatcaccattcctctggtgggagaggcccaactggcccagctccgc
ttccccattccccagggcgtgctgaggatccacttcatcgaggcgcaggaactgctgggg
aaagacaagtttctgggcgggctgatcaaagggaagtccgacccgtacggtgtcatcaag
gtgggaacgcatctcttccaaagcaaagtcatccacgagaccgtcaaccccaagtggaac
gaagtgtacgaggccttgatgtacgaacacgctggacccaacatgctggagatcgagctg
ttcgatgaagacacggataaagacgacttcctcgggagcctgatgatcgacgtggccgag
ctgcagaaggagcagaacgtggacgagtggtttgtgatcgaagacgtggcgacagggaag
attcacctcaaactggagtggttatctctgctgccctccccggagaaactggaccaggcg
ctaacgagcattaaagctgatcgcaatcaggcgaacgacggcctttcgtcggcgttgctc
gtcgttttcctggattcagcaagaaatctgccgagcgtcttcgaggggaacttgggttct
ggatacttaaaagagaggcgggcggcgggcctcgtgttttgcgagaacacggcttctctc
tataggacgttatttcgcaatccgttagagttcaaccagtcggggctgaggaagacctcg
gtcagtaaagctctgaagtctggtaaaaaagtgaccagcgatcccaatccattcgtccag
ttcagagtgggacaccagtcctacaatagcaagatccgatataagaccaatgagccggtg
tgggaggaggcgttcactttcctgatccacaacccccgcagccaggagctggaggtcgag
gtgaaagacgagaaacacgagtgcacgttgggcgttttgacggtgccgctgactcgcctt
ctggaggccgaagaaatgacgttaaatgagcgtttccccctcaataactccggcccgagc
tgcgcgctgaagatgaagatggctctgagggtgctgagcttggacaaaaccccttcctcc
gacccctcctccgacccctccgccgaccccccctcactgcaggccaacaaaaacaagaaa
acaaaccctcaacatgccgcctcttcctccgactcccccgttcctccctcctccaccttc
gacatccctcgctccgcctcagtgtcggcgcaggacgccctgaaccgaaggaaagaagcc
aacgatccgtaccgctctgtagggagcactgatttggggcagggaggaagaggaggagga
ggaggtttagctcagagtgggaggagctcctctaatctcgccatttccgggtcgcagcaa
tatctggcgggagggaaagagctgactccaagcatcgcttctgatatctccaacccttac
gccactcaggagctccagcagagactcgctctgctgcagaatggttctggtcccggtcac
ttccctctgggtgagatccagctcaccatcagacactcgtcccagaggaacaaactcatc
gtggtggtgcacggctgcagaaacctgatagcgttcacggaccacggctcggatccgtac
gtccgcctctacctgcttcccgacaaacggaggtcagggaggaggaaaactcacaccttc
aagaaaaccctcaaccccgtttacgaccagacctatgagttcagtgtgtctctcgtggag
ctccacagacgcactctggacgtcgcggtgaagaatggaggaggactgctctccaaacac
aaaggccttctgggaaaggttctggtggatttgacgtacgaggacacgtctaagggttgg
acacaatggtatgagctgagtgaagatggtctgacgaaacctcagcaactatag
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