Pseudochaenichthys georgianus (South Georgia icefish): 117464826
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Entry
117464826 CDS
T09629
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03266
Virion - Herpesvirus
pgeo04081
Hormone signaling
pgeo04145
Phagosome
pgeo04148
Efferocytosis
pgeo04510
Focal adhesion
pgeo04512
ECM-receptor interaction
pgeo04517
IgSF CAM signaling
pgeo04810
Regulation of actin cytoskeleton
pgeo04820
Cytoskeleton in muscle cells
pgeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
117464826
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
117464826
04512 ECM-receptor interaction
117464826
04517 IgSF CAM signaling
117464826
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117464826
04148 Efferocytosis
117464826
09144 Cellular community - eukaryotes
04510 Focal adhesion
117464826
09142 Cell motility
04820 Cytoskeleton in muscle cells
117464826
04810 Regulation of actin cytoskeleton
117464826
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117464826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117464826
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117464826
04515 Cell adhesion molecules [BR:
pgeo04515
]
117464826
04090 CD molecules [BR:
pgeo04090
]
117464826
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117464826
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117464826
Cell adhesion molecules [BR:
pgeo04515
]
Integrins
Integrin beta subunits
117464826
CD molecules [BR:
pgeo04090
]
Proteins
117464826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
PSI_integrin
EGF_integrin
EGF_2
EGF_TEN
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
117464826
NCBI-ProteinID:
XP_033963424
LinkDB
All DBs
Position
19:complement(18264014..18280164)
Genome browser
AA seq
795 aa
AA seq
DB search
MGALPAGRTLWMCLYICIGITGVCGSNVCTSRGASTCKQCLAVHPSCAWCLQEDFGQGFA
RSSRCDLKSNLVAAGCATSSLESPISKLQVIEDRPLSNKAAGATQDVTQIKPQRLQITLR
PDDAKRFTVKVRQVEDYPVDLYYLMDLSYSMNDDLFRLRTLGKGLAEAMNRTTSNLRMGF
GAFVDKPLSPYMYISPKEAVKNPCYSINTTCLPQFGYKHVLSLTEEVGRFTEEVKKQMVS
RNRDAPEGGFDAIVQAAVCKERIGWRPGASHLLIFTSDAKTHMALDGRLAGIVQPNDGKC
HLNSDNMYSMSTTMDYPSLALITEKTSENNINLIFAVTNPVVPLYQNYSELIPGTTVGTL
SNDSGNVIQLILKAYAKIRSRVELELQGVPEELSLSFNATCLNGELIPGLKSCSGLKIGD
TVSFSVEARARGCPKQKKKTFIIKPVGFKDSLSITVTFECDCKCQNKAQPNSPKCNHGNG
TFECGICQCHPGRLGPHCECAEGDYNPTEQDRCSGPAGSGGPQSAICSGRGDCVCGQCVC
HNSDFGKVWGKLCECDDFNCLRYKGDLCSGHGVCNCGFCQCGPDWQGENCNCSRRTDTCM
SNVGLLCNGRGHCECGACECTQPGAYGATCDKCPTCPDACTMKKECVECKHFKRGKLLDD
NTCSRICKDEIVLVDEIVLHDTNAVNCTYKDEDDCVERFQYYEDSSGKSILFVVKEPECA
KGPDILVVLLSVAGAILFLGLAALLIWKLLVTIHDRREFAKFEEERAHAKWDTGHNPLYK
GATSTFTNITYRGKD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctctcccggcgggcaggacactatggatgtgtctttacatctgcattggaata
acgggagtatgcggttctaacgtctgcacctccagaggggccagcacatgcaagcagtgt
ctggctgttcaccccagctgtgcgtggtgcttacaggaggacttcggccaggggtttgcc
agatcttcccggtgtgacctgaagagtaacctggtggcagcaggctgtgctacgtcttct
ctggagtctccaatcagcaaactgcaggtgatcgaggaccggcccctcagcaacaaggca
gcaggggccacgcaagatgtcacacagattaaaccacagagactacaaatcaccctcagg
ccagatgatgctaagcgcttcacagtgaaggtgcgtcaggtagaggactaccctgtggat
ctctactacctcatggatctctcttactccatgaacgatgacctcttccgcctgaggact
ttgggaaaaggcctggccgaggccatgaatcgcaccaccagcaacctccgcatgggcttc
ggggcttttgtggacaagccgctctcgccttacatgtacatctcccccaaagaggctgtg
aagaacccctgctacagcattaacaccacctgcctgccacagtttggctacaaacacgtt
ctgtccctgacggaggaggtgggccgcttcacggaggaagtgaagaagcagatggtgtcc
aggaaccgagatgcccccgagggaggcttcgatgccatcgtccaggctgccgtatgcaag
gagcggatcggttggcgtcccggtgcttcccaccttctgatcttcacctcagacgctaag
actcacatggctctggatggtcgtctggctggaatcgtgcagccaaacgacggaaagtgc
cacctcaactctgacaatatgtacagcatgtctaccaccatggattacccttctctagct
ctgatcacagagaagacgtcggagaacaacatcaatctcatctttgccgtcaccaaccct
gtggttcctctgtaccagaactacagtgaactgattcctggcaccacagtaggaacactg
tcgaacgactcgggcaacgttattcagctcattctgaaagcctacgctaaaatccggtcc
agggtggagctggagcttcaaggcgtcccggaggagctgtccctgtcattcaatgccacc
tgtctgaatggagagctcatccctggcctcaaatcctgctctgggctcaagataggggat
acggtgtctttcagtgttgaagccagagctcgtggttgccccaaacagaagaagaagacc
ttcatcattaagccggtgggcttcaaggactctctctccatcaccgtcacctttgagtgc
gactgcaagtgccagaacaaggcccagcccaacagccccaaatgcaaccatggcaacggc
accttcgagtgcggcatctgccagtgccacccgggccgcttggggccgcactgcgagtgt
gccgagggggactataaccccacggagcaggaccgctgcagcgggcccgcgggctccgga
ggaccccagtctgccatctgcagtggccggggggactgtgtgtgcggacagtgtgtgtgt
cacaacagcgactttggaaaggtctggggaaagctgtgtgagtgtgacgacttcaactgc
ctgcgctacaagggggatctgtgctcaggccatggcgtctgtaactgtggtttctgccag
tgtggcccagactggcagggtgagaactgtaactgctccagacgtactgacacctgtatg
tccaacgtgggcttgctgtgcaacgggagaggtcactgtgagtgtggggcctgtgagtgc
acccagccaggggcctacggggccacgtgtgacaagtgccccacctgccccgacgcctgc
accatgaagaaggagtgtgtggagtgcaaacactttaagaggggcaagctgttagacgac
aacacctgctctcgaatctgcaaggatgagattgtgcttgtggatgaaatagtgcttcat
gatacaaatgctgtgaactgcacttacaaagatgaggatgactgtgtggagcgtttccag
tactatgaggactccagcggaaagtccatcttgtttgtcgtcaaagagccagaatgcgcc
aagggtccagacattttagtggtgcttctgtcggtggcaggagctatcttgttcctcggc
ttggcggctctactcatctggaaactgctggtcaccattcacgacagacgggagtttgca
aaatttgaggaagaacgcgctcatgccaagtgggacacgggacacaatcctctctacaaa
ggagccacatctacctttacaaacattacatacagaggaaaagactga
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