Pseudomonas germanica: J0G10_06875
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Entry
J0G10_06875 CDS
T08191
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf00541
Biosynthesis of various nucleotide sugars
pgf01100
Metabolic pathways
pgf01250
Biosynthesis of nucleotide sugars
Module
pgf_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
J0G10_06875 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pgf01005
]
J0G10_06875 (kdsA)
Enzymes [BR:
pgf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
J0G10_06875 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pgf01005
]
Lipid A
J0G10_06875 (kdsA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
CV_2116-like
Motif
Other DBs
NCBI-ProteinID:
QYY83171
UniProt:
A0ABX8YT57
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All DBs
Position
1585351..1586196
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AA seq
281 aa
AA seq
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MAQKIIRVGDIEIANDKPMVLFGGMNVLESRDMAMQVCEEYVKVTEKLGIPYVFKASFDK
ANRSSVASYRGPGLEEGMRIFQDIKQAFGVPIITDVHEPDQAAVVAEVCDIIQLPAFLSR
QTDLVVAMAKTNAVINIKKAQFLAPQEMKHILNKCVEAGNDQLILCERGSSFGYNNLVVD
MLGFGIMKQFEYPVFFDVTHALQMPGGRADSAGGRRAQVLDLAKAGMSQSLAGLFLEAHP
DPDNAKCDGPCALRLDKLEPFLAQLKALDELVKSFPTVETA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaagatcatccgcgtcggcgacatcgaaattgccaacgacaaacccatggtg
ctgttcggcggcatgaacgtgctggaaagccgtgacatggccatgcaggtttgcgaagag
tacgtaaaggtcaccgaaaaactcggtatcccttacgtgttcaaggccagtttcgacaag
gctaaccgttcttctgtggcctcttatcgtggtcctggcctggaagagggcatgcgcatc
ttccaggacatcaaacaagcctttggcgtgccgatcatcaccgacgtccacgagcctgat
caggccgcggtcgtcgctgaggtctgcgacatcattcaactgccggccttcctgtcgcgc
cagaccgatctggtcgtcgcgatggccaagaccaatgcagtgatcaacatcaagaaagcc
cagttcctcgcgcctcaggaaatgaaacacatcctgaacaagtgcgtggaagcgggtaac
gatcaattgatcctctgcgagcgtggttcgagcttcggctacaacaacctcgtggtcgac
atgctcggcttcggcatcatgaagcagttcgagtacccggtattcttcgacgtgacccac
gcgctgcaaatgcctggcggtcgtgccgactccgctggcggtcgccgtgcccaggttctg
gatctggccaaggcgggcatgagccagtcgttggcaggtctgttcctcgaagcgcacccg
gatccggacaatgccaaatgcgacggcccttgcgccttgcgtctggacaaactggagcca
ttcctggcccagctcaaggctttggacgaactggtgaagagttttccgacggtagaaacc
gcgtaa
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