Pseudomonas graminis: FX982_01015
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Entry
FX982_01015 CDS
T06934
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
pgg
Pseudomonas graminis
Pathway
pgg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FX982_01015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgg03400
]
FX982_01015
DNA repair and recombination proteins [BR:
pgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FX982_01015
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FX982_01015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
BCA_ABC_TP_C
AAA_23
AAA_22
RsgA_GTPase
AAA_33
DnaJ_CXXCXGXG
Viral_helicase1
nSTAND3
APS_kinase
Zn-ribbon_8
cobW
AAA_21
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QKF50088
UniProt:
A0A6M8MNA4
LinkDB
All DBs
Position
1112984..1115818
Genome browser
AA seq
944 aa
AA seq
DB search
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQPRC
PDHDIPLEAQTVSQMVDLVLAQPEGAKLMLLAPVVRERKGEHLAVFEELRAQGFVRARVN
GRLCELDELPKLDKQKKHSIDVVVDRFKVRSDLQQRLAESFETALKLADGIALVAPMDDE
PGEEIIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDTKRLVNGELT
LAEGAIRGWDRRNVYYFQMLGSLAKHYRFSLEVPFKELPADLQKVLLGGSGKDSVDFRYL
NDRGDIVKRAHPFEGIVPNLERRYRETESTTVREELAKFLSTQPCPECRGTRLRREARHV
WVGEKTLPAVTNMPIGDATHYFGELKLTGRRGEIADKILKEIRERLQFLVNVGLDYLTLD
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLDTLRHLRDIGNTV
IVVEHDEDAIRLADYVVDIGPGAGVHGGKIVAEGTPQEVMDHPDSLTGKYLSGRVKIAVP
AKRTPRNKKLSLKLKGARGNNLRNVDLEIPIGLLTCVTGVSGSGKSTLINNTLFPLSATA
LNGATTLEASAHDSIDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEVKYK
GKNVHEVLEMTIEEARAFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGQIIATGTPEQVADMKQSYTGHYLKPLLERDRA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
ttggacaagatcttgattcgtggggctcgaacccacaacctgaagaacatcgacctgacc
cttccacgcgacaagctgatcgtcatcaccggattgtccggctcaggaaaatcgtccctc
gcgttcgatacgctctatgccgagggccagcgtcgctacgtcgaatcgctgtccgcctac
gcgcgccagttcctgtcgatgatggagaagccggacgtcgatacgatcgaaggtctgtcg
cccgccatttccatcgagcaaaagtccacgtcccacaacccacgctcgaccgtcggcacc
atcaccgagatctacgactacctgcgtttgctatatgcgcgggtgggtcagccgcgttgc
ccggatcacgacattcccctggaggcgcaaaccgtcagtcagatggtcgacctggtcctg
gcccagccggaaggcgccaaactgatgctgcttgcccccgtggtacgggagcgaaaaggc
gagcacctggcagtcttcgaagagcttcgcgctcagggtttcgtccgggctcgggtgaac
ggtcggctgtgcgagctggacgaacttcccaagctcgataaacagaagaagcactcgatc
gatgtcgtcgttgaccgcttcaaggtgcggtcggacctgcaacagcgtttggccgaatct
tttgagaccgcgctgaagctggctgacggcatcgcgctggtggcgccgatggacgacgag
cccggcgaagagatcattttctccgcgcgattcgcttgcccgatctgtggccatgcgatc
agcgagctggaaccaaagctgttctcgttcaacaaccctgcaggcgcatgtccgacctgc
gacgggctgggcgtgaagcaattcttcgacaccaaacgcctggtcaatggcgaactcacg
ctggcagaaggcgcgattcgaggctgggacaggcgaaacgtctattacttccagatgctc
ggctcgctggcaaaacattaccgcttcagccttgaggtgccgttcaaggaactgcctgcg
gatttgcagaaggtgctgctcggcggcagcggtaaggacagcgttgatttccgttacctt
aacgaccgcggcgacatcgttaaacgtgcgcacccgtttgaaggcatcgttcccaacctc
gagcggcgctatcgcgaaactgaatcgaccacggttcgcgaggagttggcgaagtttctc
agcacgcagccgtgccccgagtgccgtggcacgcggttgcgccgagaggcacgtcacgta
tgggttggtgagaagacacttccagccgttaccaacatgccaattggcgacgctacccac
tattttggtgagttgaagctcacgggccgccgcggcgagattgccgacaagattctcaag
gaaattcgcgaacgcctgcagttcctcgtcaacgttgggttggactatctgacactggac
cggagcgccgacacgctctccggtggcgaggcgcagcgaattcgtctggccagccaaatc
ggcgcaggcctcgtcggcgtgatgtacatcctcgatgagccttcaatcggcttgcatcag
cgcgataacgatcggctgctggatacgttgcggcacctgcgagacatcggtaatacggtc
atcgtggtcgagcacgacgaagacgcaattcgactagccgactatgtggtcgacatcggt
ccgggtgcaggcgtgcatggcggcaagattgtcgcggaaggcacgccacaggaagtgatg
gatcatccggactcgctgacgggcaaatacctgtcgggccgggtgaagatcgccgtgcct
gccaagcgaacgcctcgtaataaaaagctgtcgctcaaactcaaaggcgcgcggggcaac
aatctgcgcaatgtcgatcttgaaataccgattggcttgctgacctgcgtgacaggcgtg
tcgggctcgggcaagtcgacgctgatcaacaacaccctgttcccgctcagtgccactgca
ctcaatggagcaacaacgctcgaggcgtcggcacacgacagcattgacggcctgcagcac
ctggacaaagtcgttgatattgaccagagccctattggacgtacgccgcgatccaaccct
gcgacgtacaccgggctgtttacgccaatccgtgagctgttcgcgggcgtgcctgaatca
agatcccggggttacggacctggccgattctctttcaacgtcaagggtggtcgctgcgaa
gcgtgccaaggtgacggcctgatcaaggtcgagatgcattttctgcctgacatctacgtc
ccttgcgatgtgtgcaagagcaagcgatacaaccgtgaaacccttgaggtgaagtacaag
ggcaagaacgttcacgaggtcctggagatgacgatcgaggaagcgagggcgtttttcgac
gccgtgcctgccctcgctcggaaattgcaaacgctgatggatgtgggtctgtcctatatc
aagctgggccagtcagcgactacgctttcgggtggtgaagcgcagcgggtgaagctgtcg
cgcgagctgtcaaagcgtgacaccggcaaaaccttgtacatcctcgacgagcccaccacc
ggcctgcacttcgcggatattcagcaactgctggacgtcttgcatcgacttcgcgaccac
ggcaacacggttgttgttatcgagcacaacctggatgtgatcaagacagccgactggctg
gtcgacctaggccccgaagggggttcgaaaggcggacagatcatcgcaaccggtacgcca
gagcaggtggcggacatgaaacagtcctacaccggccactatctgaagccgcttctggag
cgcgatcgcgcttga
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