Pteropus vampyrus (Indian flying fox): 120607070
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Entry
120607070 CDS
T07511
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120607070 (FOCAD)
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120607070 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
DUF1844
Motif
Other DBs
NCBI-GeneID:
120607070
NCBI-ProteinID:
XP_039724631
LinkDB
All DBs
Position
Unknown
AA seq
1805 aa
AA seq
DB search
MSDDIRKRFEFPNSLIQSQAVGHLIAAVLKESGFSGKIHQSTNQTPALNLLWEKCCSDNV
VIRTACCEGLVALVAQDHAEFSYVLNGILNLIPSTRNTHGLIKAIMKLFQMQALKEGQGE
EKSIQDIYTIRNHPHPLITVLEYRPDCWPVLLQQLTVFFQQCPERSEVSCIQIMAPFLWY
LYCEPSQLQEYAKLRLALRKVLLQPWVLCDKEQPSILQQQILQLCCDIVPCLQIKDLIQT
TEVMLFIEDIYLSLSHHPVFWKVQLTQLTLQLLCVCEVSLKITGECSSLIHLLEHGVELL
KEDFPVELVIIGIALLLLQTPASQQKPILNLALKLLSFADGQKIPKSSSLLVMPVLQILS
STALEDCISPEEDSPSRQQLALNLLEMVQQECYRDDHQKLPYKLVFPITSMYGSIFTAWR
ILEVMREESSVSDWLASVESLLPVTTVIPVHVFLLLAHLLVEDKGRNLRQILKVTTKLAQ
ADSSQVPNLIPVLMFKLGRPLEPILYNDILYTLPTLGVHKVCVGQILRVIQLLGTTPQLR
AVTLRLLTSLWEKQDRVYPELQRFMAMSDVPSLSAGKEVQWEKLIAKAASIRDICKRRPY
QHGADMLAAISQVLNECTKPDQASPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR
PLILKTLSELFSLVPSLTVNTAEYENFKVQVLSFLWTHTQSKDPVIANAAYKSLAHFSAG
EHTILHLPEQIRPEIPIPDELDEDEDDEGDEKNMDLSVPGSCYLKLLSLTAPLVLPALEE
FFISLVKQEMVNMPRGVYHSALKGGTRSDQGKTVAGIPNFILKMYETNKQPGLKPGLAGG
MLFCYDISMYQSKDGKPLNRLMASRGRSFKQTSLALVHEVHIQLSEWHRAIFLPQAWLVY
MNRAYHAILQGRIGELELQLKHGKEGAEEVQYKKSTAWLWVRDMLTDEITKAAAKESPVV
KGNALLALSSLAVIVSKHEASLSSDAEGVLEVQPNFLSMKEWVSMVFDTLLVIVDSHYQP
RGQLFSWFYYKSYSGENTASAIARSAAATALSLLVPVFITSCKEKVEEILNMLTARLPGK
PSADESQAVQIHMGLALGMFLSRLCEEKLSDISGQQMNLLLMKSLDALENCCFDTSLEYN
TGCILGVGLVLSLMSHSSQMESRVHVAASLRKLSTYLDDSGSQSRTFQEVLAYTISCVCT
SAFSAGIIEAAEAEDIMNKLRLLVENNQQTSGFALALGNTVHGLSVCGHGKAEDLGNKLL
PAWIRIVLAEGTPTMLCLAALHGMVALVGSEGDIMQLKSEAIQTSHFQARLNEVIRTITQ
VISVSGVIGLQSNAIWLLGHLHLSILSSNQSRTSVPTDYSYLPESSFIRAAIGFFITGGK
KGPESVPPSLLKVVMKPIATVGESYQYPPVNWAALLSPLMRLNFGEEIQQLCLEIMVTQA
QSSQNATALLGLWVMPPLIHGLSLNIKKYLLVTAPLWIKHVSDEQILGFVENLMVAVFQA
ASPLSSPELCPSALQGLSQAMKLPSPAYHLWSLLCEATGKIFDLLPNKIRRNDLELYISV
AQCLSEMTDDEANRIAQITENNIEKATFVRLYLVSQGRFPLVGLTDVLRVAMQHQEKATL
AWMILHSLYQARIVSHANTGVLKRMEWLLELMGYIRNIAYQSSSVQNVVLDEALDFLLLI
FATAVVAWADHDAPLLLGLSASWLPWHQENGPAVPASSFLGRSPMHRVTLQETLTLLPSS
MLLLLQKEPWKEQAQKFIDWLLNLMESPKEALSAKSRDLLKATLLSLRVLPEFKKKAIWT
RAYGW
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgacatcaggaaaaggtttgaatttccaaattctcttatacaatcacaggct
gtgggtcatcttattgctgcagttctaaaggaaagtggtttttcaggaaagatccatcaa
tccacaaaccagactcctgccttgaacttgctgtgggagaagtgttgcagtgataatgtt
gtgattcgaacagcctgctgtgagggtctggtggcactcgtggctcaggatcatgcagag
ttcagctatgttctcaatgggatactcaacctgattccatcgaccaggaatacccatggc
ttgataaaagccattatgaaattatttcaaatgcaagctcttaaggaaggacaaggtgag
gaaaagagtattcaggatatatatactattagaaatcatcctcaccctttgatcactgtg
cttgaatacagacctgattgctggccagtacttttgcagcagctaacagttttttttcag
caatgtcctgaaaggtcagaagtttcatgtatccaaataatggcaccatttctatggtat
ctatattgtgaaccatcgcagttacaagaatatgctaaacttcgactagccctgcgaaaa
gtcttacttcaaccctgggttctttgtgacaaagaacaaccatcaatattgcaacaacag
atacttcaactgtgttgtgacatagttccatgtttgcagataaaagatttgatacagaca
acagaagtgatgctgtttatcgaggacatatatttaagcctttcacatcatcccgttttc
tggaaagttcagcttacccagctgactcttcagctgctgtgtgtctgtgaagtcagctta
aagataactggggaatgctcatctttaattcaccttttagagcacggtgttgaacttctg
aaggaggattttcctgttgaactggtcataattggaatagctttattacttctacagact
ccagcaagtcagcagaagccaatcttaaatctagctttgaagctcctctcttttgctgat
ggtcagaaaattccaaaatcatcctcgctgctagtgatgccagttctgcagatattatct
tctactgccttggaagactgcatatccccagaagaagacagtccctctaggcagcagttg
gctctgaatcttttagaaatggtacagcaggagtgctacagagacgaccaccaaaagctg
ccctacaagcttgtcttccccataaccagcatgtatgggtcaatatttacagcctggagg
atccttgaagtaatgagagaagagtcttcagtgagtgactggttggcttcagtagagtca
ttgctccctgtcactacagtgatccctgtgcatgtttttcttctgctggctcacctcctt
gttgaagataaaggaagaaatcttcgccaaatactgaaggtcactacaaaattagcccaa
gcagattcctctcaggtaccaaatttaattccagttttgatgttcaaattaggaagacca
ctggaacctatattatacaatgatatcttatatactttacctacacttggtgttcacaag
gtgtgcgttggacaaattctacgagtaatccaacttcttggaactactccacaactaaga
gctgtcactttgcgcttattgacatctttgtgggaaaagcaggatcgcgtctatcctgaa
ctgcagcgtttcatggcaatgtctgatgtaccctctctctctgcgggtaaggaggtccag
tgggagaaattgattgctaaagcagcatccatcagagacatatgtaagcgaaggccatat
cagcatggtgcagatatgttggcagctatttcccaggtgttgaatgaatgcaccaagccc
gatcaagctagtccagcagctttggtgttacaaggtcttcatgcactctgccaagctgag
gttgtttgtattcgctccacttggaatgctctctctccaaagctgagttgtgatacaaga
cctctcattttgaagaccctcagtgaactgttttctctggttccttccttaacagtcaat
acagctgaatatgagaattttaaagttcaagtcctcagcttcctctggactcacactcaa
agcaaggacccagttatagcaaatgctgcatataaatctctggcacactttagtgccgga
gagcacaccattcttcatctacctgagcagataagaccggaaatccctattcctgatgag
ctagatgaagatgaagatgatgagggtgacgaaaagaatatggatctttcagttcctggt
tcttgttatctcaaactgttgtcactcactgctcctttggttttaccagctttggaggaa
ttttttatatcacttgtgaagcaagaaatggtaaatatgccccgtggggtatatcattct
gcattaaaaggaggtacccgctcagaccaaggaaagactgtagcaggaatccccaatttt
atattgaaaatgtatgaaacaaacaagcaaccaggtttgaaacctggccttgcaggtggt
atgttattttgttatgatatttcaatgtatcagagtaaagatggcaaaccattgaatcga
ctgatggccagtagagggcgaagtttcaagcagacttcccttgctctggtgcatgaggtt
cacatccagctttcagagtggcaccgtgccatttttctcccacaggcgtggctggtatat
atgaatcgagcttatcatgccattttacagggaagaataggagagctggagttgcagtta
aaacatggaaaagaaggagctgaggaggtgcaatacaaaaaaagcacagcctggctctgg
gtccgagacatgttgactgatgagatcacaaaggcagctgcaaaggagagcccagtggtc
aaaggcaatgcactgttggccttaagcagccttgctgtcatcgtatccaaacatgaagcc
agcctctcctcagacgctgagggggtcctggaggttcagcctaatttcctttcaatgaaa
gagtgggtttccatggtgtttgacactctcctggtcattgtggatagccattaccaaccc
agaggacagcttttctcctggttttattataaatcctattctggtgaaaacacagctagt
gccatcgcccgttctgcggctgccacggctttgtctctccttgtgccagttttcattacc
tcttgcaaagagaaggttgaggaaatcctgaacatgctgactgccaggttacctgggaaa
ccaagtgctgatgagtctcaagccgtgcaaatccacatgggccttgctttggggatgttt
ctctctcgcttgtgtgaggagaaactcagtgatatatctggccagcagatgaaccttctt
ctgatgaagtctttggatgccctggaaaattgctgctttgacactagtcttgaatataac
acgggctgtatattgggagttggacttgttctgtccctcatgagccacagcagccaaatg
gagtcacgagttcatgtggcagcatcacttcggaagctttctacatacctcgatgacagt
gggagccagagcagaacatttcaggaggtccttgcctataccattagctgtgtgtgcaca
tcagcattcagtgctggaattattgaggctgcagaggctgaagatattatgaacaagctt
cgactgttggtagagaacaaccagcagacctcaggttttgccttggccttagggaacaca
gttcacggcttgtctgtatgtggacatgggaaagctgaagacttaggcaacaaactgctc
cctgcctggatcagaattgttctagcagagggcacgcccacaatgctttgcttggcagct
cttcatggtatggtagccttggtaggctccgaaggagatataatgcagctgaagtcagaa
gccatacagacctctcattttcaagccagacttaatgaagtcatcagaaccataacacag
gtcatcagtgtatctggggtgattggtcttcagtccaatgcaatctggcttctgggacat
cttcatctatctattctgtcctccaatcaaagtagaacctctgttcctactgactatagc
tatttgcctgaaagcagttttatcagagcagccattggcttcttcattacaggagggaaa
aaaggccctgaatctgtgcctccttcccttctcaaggtagtgatgaaacccattgcaact
gttggcgaaagctaccagtaccctcccgtgaactgggctgcgctcctctctccacttatg
aggctaaactttggtgaagagattcaacaactgtgccttgaaattatggtgactcaggca
cagtcatcccagaatgcaactgcactcttgggattatgggtgatgccaccactgatccac
ggtctgagtctgaatattaagaaatacctcctggtaactgcacctctgtggatcaaacat
gtctctgacgaacagatcctgggctttgtggaaaacttaatggtagcagtttttcaagca
gcttccccactttccagtcctgagttatgccctagtgccttgcaaggtctgagccaggct
atgaaactgcccagccctgcctaccacctctggagcctgctctgtgaagctactgggaaa
atttttgacctcctgccaaataagattcggagaaatgatctagagctgtatatcagtgta
gcacagtgcctctcggaaatgactgatgatgaagccaatcggattgctcagattactgag
aacaacatagaaaaggccacctttgtcagactgtacttggtctctcaagggcggttccct
ttggtgggcttgactgatgtgctccgcgtggctatgcagcaccaagaaaaagccacgctg
gcctggatgatactgcacagcttataccaggcacggattgtgagccatgccaacacaggt
gtgttgaagagaatggaatggctcttggaactgatgggttatatcagaaatattgcttac
cagtcatcatctgttcagaatgtggttcttgatgaggctttggacttcttgttgctgata
tttgcaacagcagtggttgcatgggcagaccatgatgcccctctcctcctcggcctcagt
gccagttggttgccatggcatcaggaaaatggcccagctgtgccagcatcaagcttcctt
ggcaggagtccaatgcacagggtcactctacaggagactctcactctccttcccagtagc
atgcttctcctgctgcagaaagagccatggaaggaacaggcccagaagttcattgactgg
ctgctcaacctcatggaaagtcctaaagaagccctctccgcaaaatccagggatctttta
aaagccaccctgctatccttgagagttctccccgagtttaagaagaaagccatatggacc
agagcgtatggttggtga
DBGET
integrated database retrieval system
