KEGG   Pteropus vampyrus (Indian flying fox): 120619600
Entry
120619600         CDS       T07511                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
pgig  Pteropus vampyrus (Indian flying fox)
Pathway
pgig03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pgig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    120619600 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgig03400]
    120619600 (TDP1)
DNA repair and recombination proteins [BR:pgig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     120619600 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 120619600
NCBI-ProteinID: XP_039739936
LinkDB
Position
Unknown
AA seq 639 aa
MSQEGGYGRWTISSSDESEEEKPKPDKPSTSLVAHAGQGVVCEPRYTCSEARKAAHRRKM
SPVKFSNTDAVSEVLPPKRQKSGSQEDLGWCLSSSDDELPPQTQQKPAEKVAVKEERSTS
SPKDDAAPRAGNHVRHELSKEEDEYETSGEGQDIWDMLDKGNPFQFYLTRVSGIKPKYNS
GALHIKDILSPLFGTLVSSAQFNYCFDVDWLIKQYPPEFRKKPILLVHGDKREAKAHLHA
EAKPYGNISLCQAKLEIAFGTHHTKMMLLLYEEGLRVVIHTSNLIRADWHQKTQGIWLSP
LYPRIAPGTNTSGESTTHFKADLVGYLMAYNAPALKEWIDVIHEHDLSETNVYLIGSTPG
RFQGSQKDNWGHFRLRKLLKEHASSMPKAESWPVVGQFSSIGSMGADESKWLCSEFKETL
ATLGRESKTPGKSAVPLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYFHKW
SAETSGRSNAMPHIKTYMRPSPDFSQIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELG
VLFLPSAFIGRGFGTFPTSKPQIHTGTCGFHRESPKPSEAAVLRPRAPNGGRSCPNGVFT
SLSFVCAPGERFVGVALLNMDIGYSCYHFSPPAPTPNFF
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgtctcaggaaggtggttacgggaggtggacgatatccagcagtgatgagagtgaggag
gaaaagcccaaaccggacaagccatctacttctcttgtcgcccatgctgggcagggagta
gtgtgtgagccaaggtacacctgttccgaggctcggaaagccgcccaccggaggaagatg
tcacctgtgaaattcagcaacacagatgcagtttccgaagtgttacctcccaaaaggcag
aagagtggctcccaggaagacctaggttggtgtctctccagcagtgacgatgagctgcca
ccacagacgcagcagaagccagctgagaaagtggccgtcaaggaggagagaagcacctcc
tctcccaaagacgatgctgccccgagagctggaaatcacgtccgccacgagctcagcaag
gaggaagacgagtacgagacatcaggggaaggccaggacatttgggacatgctggataaa
gggaaccccttccaattttacctcactagagtctcaggaattaagccaaagtataattct
ggcgccctccacatcaaggatattttatctcctctgtttgggacccttgtatcttcagca
cagtttaactactgctttgatgtggactggctcataaaacagtacccaccagagttcagg
aagaaaccaatcctgcttgtgcatggcgataaacgggaagccaaggctcacttacacgcc
gaggcaaagccttatggaaacatttccctttgccaggcaaagctggaaattgcatttgga
acacaccacacgaagatgatgctactgctgtatgaagaaggcctccgggtcgtcatacac
acctccaacctcatccgtgctgactggcaccagaaaacgcaaggaatatggttgagcccc
ttatacccacgaattgcccctggaaccaacacatccggagaatcaacaacacattttaaa
gctgatctcgtcggctacttgatggcttataatgctcctgctctcaaggagtggatagac
gtcatccacgagcacgatctctctgaaacaaacgtttacctcattggatcaaccccggga
cgctttcaaggaagtcagaaagataattggggacattttaggcttaggaagcttctgaaa
gaacatgcctcgtccatgcccaaagcagagtcttggccagtagtcggtcagttttcaagc
attggctccatgggggccgacgaatcgaaatggttgtgttctgagtttaaagagaccttg
gcgacgctggggagggaaagcaagaccccagggaagagcgccgtgccccttcatttgatc
tatccatctgtggaaaatgtgcgaaccagcttagaaggatatccagctgggggctctctt
ccctatagcatccagactgctgaaaaacagaattggcttcattcttattttcacaaatgg
tcagcggagacatctggccgcagcaatgccatgccgcatattaagacatacatgagaccc
tctccagacttcagtcaaatcgcatggttcctcgtcacaagcgcgaatctgtccaaggcc
gcctggggagcactagagaaaaacggcacccagctgatgatccgctcctacgagctcggc
gtccttttcctcccttcggcgtttatcggccgtggatttggaacattccctacgtcaaag
ccccagatacacacgggaacatgtgggttccatcgtgagagcccgaagcccagtgaagcc
gccgtgttgagaccgcgagccccaaacggggggcgttcttgtccgaacggggtgttcacg
tccctgagtttcgtctgcgcccctggggagcgcttcgtcggggtcgctcttttgaacatg
gatattggttacagttgttaccatttctcaccgcccgcccccaccccaaattttttttaa

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