Paraburkholderia ginsengisoli: I6I06_06450
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Entry
I6I06_06450 CDS
T07246
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6I06_06450 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgis03400
]
I6I06_06450 (uvrB)
DNA repair and recombination proteins [BR:
pgis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6I06_06450 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6I06_06450 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
UB2H
AAA_16
Kinesin
AAA_22
betaPIX_CC
Motif
Other DBs
NCBI-ProteinID:
QQC65103
UniProt:
A0A7T4TA28
LinkDB
All DBs
Position
1:complement(1469569..1471662)
Genome browser
AA seq
697 aa
AA seq
DB search
MSEQHLTEVDDTLDESKFVTFDGSPFQLYQPYPPAGDQPTAIDTLVEGVEDGLSFQTLLG
VTGSGKTFTMANTIARLGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPE
AYVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMIL
TLRTGDKLGQRDIIARLIAMQYNRNEADFQRGSFRVRGDTIDIFPAEHAEMAVRVELFDD
EVETLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRDTVVRAVETIKSELRERLEFFYSDGK
LVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPSDAIMMLDE
SHVLIGQLNGMYNGDRARKENLVDYGFRLPSALDNRPLKFNEFERKMRQVVFVSATPADY
EKKTAGQVAEQLVRPTGLVDPEIEVRPARSQVDDVLGEINERVKVGDRVLVTVLTKRMAE
QLTEFLSDHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAI
LDADKEGFLRAERSLIQTIGRAARNVNGKAILYADKVTDSMRRAIDETERRRAKQIAFNL
ANGITPRGVVKRIRDIIDGVYNVDDARAELKEQQTRAKFEDMSEKQLAKELKRLEKQMME
HAKNLEFEKAAQTRDQLALLRQRVFGANVGDHVSGIE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacaacatctgaccgaagtcgacgatacgctcgacgaatccaaattcgtcacg
ttcgacggctcgccgttccagctctaccagccgtatccgcccgccggcgaccagccgacg
gcgatcgacacgctcgtcgaaggcgtcgaggacggcctctcgttccagacgctgctcggc
gtgaccggctccggcaagaccttcacgatggccaatacgatcgcgcggctcggccgccca
gcaatcgtgttcgcgccgaacaagacgctcgccgcgcagctttactcggaattccgtgag
ttcttcccgcgcaacgcggtcgagtatttcgtctcgtactacgactactaccagccggaa
gcgtacgtgccgcagcgcgacctgttcatcgaaaaggactcgtcgatcaacgaacacatc
gagcagatgcgtctgtcggccaccaagagcctgatggagcggcgcgacgtggtgatcgtg
gcgacggtgtcggccatttacggtatcggcaatccgtccgaataccatcagatgattctg
acgctgcgcaccggcgacaagctcggccagcgcgacatcatcgcgcggctgatcgcaatg
cagtacaaccgcaacgaagccgacttccagcgcggctcgttccgcgtgcgcggcgacacg
atcgacattttcccggccgagcacgcggagatggcggtgcgcgtcgaactgttcgacgac
gaagtggagacgctgcaactgttcgatccgctgaccggccgcgtgcggcagaagattccg
cgcttcaccgtgtacccgtcgtcgcactacgtgacgccgcgcgataccgtggtgcgcgca
gtcgagacgatcaagagcgaactgcgcgagcggctcgaattcttctatagcgacggcaag
ctggtcgaagcgcagcggctcgaacagcgcacccgcttcgatctcgaaatgctgcaggag
cttgggttctgcaagggcatcgaaaactactcgcggcacttctccggcgcggcacccggc
gagccgccgccgacgctggtcgactacctgccgtcggacgcgatcatgatgctcgacgaa
tcgcacgtgctgatcggccagttgaacggcatgtacaacggcgaccgggcgcgcaaggag
aatctggtcgactacggtttccgcctgccgtccgcgctggataaccggccgctcaagttc
aacgagttcgaacgcaagatgcgtcaggtcgtgttcgtgtccgccacgccggccgactac
gaaaagaagacggccgggcaggtggccgagcagctggtgcgtccgaccggcctcgtcgat
ccggaaatcgaggtgcggccggcgcgcagccaggtcgacgacgtactcggcgaaatcaac
gagcgcgtcaaggtcggcgaccgcgtgctggtgacggtgctaaccaagcggatggccgag
cagctgaccgagtttctgtccgatcacggcgtgaaggtgcgctatctgcacagcgacatc
gacacggtggagcgggtcgagatcatccgcgatctgcgcctcggcaccttcgacgtgctg
gtcgggatcaatctgctgcgcgaggggctggatattccggaagtgtcgctggttgcgatt
ctcgacgccgacaaggaaggtttcctgcgcgccgagcgctcgctgatccagaccattggc
cgggcggcgcgtaacgtgaacggcaaggcgattctgtacgcggacaaggtgaccgactcg
atgcgccgcgcgatcgacgaaaccgagcggcggcgcgccaagcagatcgccttcaacctc
gcgaacggcatcacgccgcgtggggtggtcaaacgcattcgggacatcatcgacggggtg
tacaacgtcgacgacgcgcgcgccgaactgaaagagcagcaaacgcgcgcgaagttcgag
gacatgtccgagaagcagcttgccaaggaattgaagcgcctcgagaagcagatgatggag
cacgccaagaacctcgaattcgaaaaggccgcgcagacccgtgaccagctggcgctgttg
cgtcagcgcgtgttcggcgcgaatgtcggcgatcacgtctccggcatcgaataa
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