Pedobacter gandavensis: QG516_16735
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Entry
QG516_16735 CDS
T09013
Name
(GenBank) transglycosylase domain-containing protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00550
Peptidoglycan biosynthesis
pgj01100
Metabolic pathways
pgj01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QG516_16735
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QG516_16735
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pgj01003
]
QG516_16735
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgj01011
]
QG516_16735
Enzymes [BR:
pgj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
QG516_16735
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
QG516_16735
Glycosyltransferases [BR:
pgj01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
QG516_16735
Peptidoglycan biosynthesis and degradation proteins [BR:
pgj01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
QG516_16735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
WGQ08185
LinkDB
All DBs
Position
complement(3997812..4000034)
Genome browser
AA seq
740 aa
AA seq
DB search
MNKPLSQEDIRRYNFNIWKLLIAGIVLFALFIIAVGFGLFGELPSFRDIEHPKSNQASEV
ITEDGKILGTYFVQNRSNVTYDKISPNVINALIATEDIRFKEHSGIDFKRTFTIFLYAII
GKKQGGSTITQQLALNLFSEEGRQKNFAKRILQKFQEWVIAVKLERNYTKEEIIVMYLNT
VDFGNQAYGIKSAARVYFNTTPDKLTVSQAATLIGILKGITRYSPTRNPERALARRNTIM
GLMVKADFLTEQDYEKQIEKPLGLRFSAATVNDGIAPYFRAVVKSDIKKIFLERSILKSD
GTPYDLDRDGLKITTTINYEMQVYAEEAQKEYMKILQASFYDSWKGKNPFKGKEMQIEQG
VKRSDRYKSLQLEGKSEAEIKADFNTPTRLSIFTWKGNIDTLMKPIDSVKYYKLLLRNAM
MAMDPQSGYVKAWVGGINYEHFKYDQVKMGTRQVGSTAKPFTYAVAIENGYSPCFSVLNE
PVTIETPGSPPWTPRSSGTVPGYLTLQKALALSQNYIAAYLMKQVGPVAVATLAKKMGIT
SDVPASPSIALGSFDASVYDMTGAYSVFANKGVWKKPTYILKIQDKNGVVLYNDTPIPVP
ALNEEVAYVMTRMLRGVITNGTGWSLTGKYGVNGPIGGKTGTTNANSDGWFMAITPQLAA
GVWTGCEDRAFHFISTKQGSGAVTALPIYAGFMKRVYASKTLNISKADFEPPKNGTTITF
DCNQYQQQEQPTELDEKLGF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaccactttcgcaagaagacatcagaaggtataatttcaacatctggaagctc
ttaattgcaggaatcgttttattcgctctttttatcatcgccgttggttttggtttgttt
ggtgaacttccttctttcagagacatcgaacatccaaaaagcaatcaggcctcagaagtc
atcacagaagatggcaaaattctgggcacttactttgtacaaaacagatctaatgtcacc
tacgacaagatttctccgaatgtcatcaatgccttaattgcaacagaagacattcgattt
aaagaacactcgggaatcgactttaaacgtacattcaccatttttctttatgctattatt
ggcaagaaacaagggggaagtaccattacgcagcagctggccctgaaccttttttcagaa
gagggaaggcaaaagaactttgccaagcgtattctgcagaaattccaggaatgggtaatt
gcggtaaaattagaacgcaactacacgaaagaagaaatcatcgtgatgtatttaaatacc
gtagatttcggaaaccaggcctatggaattaaatctgcggcaagggtatattttaacacg
acaccggataaattaaccgttagtcaggcggctacattaataggcatcctaaagggcatc
accagatattctcctacccgtaatccagaacgcgcattggcccgtagaaataccattatg
ggattgatggtgaaagcggattttctaaccgagcaggattatgagaaacaaatagaaaaa
ccactaggactgcgcttcagtgcagcaaccgtaaatgatggtattgctccttatttcaga
gcagtagtgaaaagtgacatcaagaaaatctttctggaacgctcgatcctaaaatcagac
ggcacgccgtacgacctggatagagatgggctaaaaataaccaccaccatcaactacgag
atgcaggtgtatgcagaagaggcgcaaaaagaatacatgaagattctgcaagcctctttc
tacgacagctggaaaggcaaaaaccctttcaaaggaaaagaaatgcagattgaacagggt
gtcaaaagatccgacaggtacaaatctttacagctggaaggaaaaagcgaagcagaaatt
aaagcggatttcaatacccctacccgactgagcatcttcacctggaaaggaaatattgat
acgctgatgaagccaatcgactctgtaaaatactataaattgctattgagaaatgccatg
atggcgatggatccgcaatccggatatgtgaaagcatgggttggcgggatcaattatgag
cattttaaatatgatcaggtaaagatgggaaccagacaagtgggttccaccgcaaaacct
ttcacctatgcggtagcgattgaaaacggatattctccatgtttcagcgtattgaatgaa
ccggtaaccattgaaactccgggcagcccaccatggacaccaagatcttcaggaaccgtt
cctggatacctgactttacaaaaagcactggcattgtcgcagaactatattgcggcttac
ctgatgaaacaagtaggtccggtggccgtagctactttggctaaaaaaatgggaattact
tctgatgtgcctgcctctccttctattgctttaggctctttcgatgcttctgtgtatgat
atgacgggtgcttacagcgtatttgccaataaaggggtatggaaaaaaccaacatacatc
ttaaaaatacaggataaaaatggcgttgtactttacaatgacaccccgattccagtgcct
gcactgaatgaagaagtagcttatgtaatgaccagaatgctgcgtggtgtcattaccaac
ggaacaggatggagcttaactggaaaatatggcgtaaacggacctatcggtggaaaaacc
ggtacgacaaatgccaactcagatggttggtttatggccattacaccacagctggctgcg
ggtgtatggacaggttgtgaggaccgtgccttccactttattagtaccaaacagggttct
ggtgcagtgactgcattgccgatttatgctggttttatgaaacgtgtatatgccagtaag
accttgaatataagcaaagctgattttgaaccaccgaaaaatggaaccaccattactttc
gactgtaaccaataccagcagcaggaacaaccgacagaacttgacgaaaagctaggtttc
tag
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