Pedobacter gandavensis: QG516_19340
Help
Entry
QG516_19340 CDS
T09013
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pgj
Pedobacter gandavensis
Pathway
pgj01501
beta-Lactam resistance
pgj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QG516_19340
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QG516_19340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgj02000
]
QG516_19340
01504 Antimicrobial resistance genes [BR:
pgj01504
]
QG516_19340
Transporters [BR:
pgj02000
]
Other transporters
Pores ion channels [TC:
1
]
QG516_19340
Antimicrobial resistance genes [BR:
pgj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QG516_19340
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
QG516_19340
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
QG516_19340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
MYG1_exonuc
Motif
Other DBs
NCBI-ProteinID:
WGQ08670
LinkDB
All DBs
Position
complement(4602387..4603793)
Genome browser
AA seq
468 aa
AA seq
DB search
MILSYKKQMFTLALAVTVFASCRVTKPYESPQLKTMGLFREQTSTDSTTMANTPWQTVFA
DPQLAGLIQEGLDQNLDLKNAVQNIVQSKATLQQSKAAFFPTLTADVNASRNKQSQAGLN
FPPGININTLTNSFKAQLSTSWEADIWGKLSSAKRAALATYFQTDAAKRAVQTQLIADIA
TSYYTLLALDSQLEITQQTLKSRITGVETMKALKEGAVVNGAAVVQSEASRYATEVTIPD
LKRTIRETENALNILLARAPGPINRGKLLNQNPTSDLKIGVPTQLLENRPDVQAAELSFR
SAFENTNLARTYFYPSFTITATGGLSSLDLKDFFDKSVFYNLLGGLTQPIFNKGLNKARL
ITAKSAQEQAVNNFQKTLLVAGKEVSDALYTYQTAVEKEEARAKQIAALQKSVDYTQELL
RFSSATNYTDVLTSEQSLLAAQLSGVNDRLQKLQSIVNLYRALGGGWK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgattttatcctataaaaaacagatgttcacccttgcattagcggttaccgtttttgcc
tcttgcagggtgactaaaccttacgaaagtccgcagttaaaaacaatgggattgtttcgt
gagcaaacgtcaacagacagcaccaccatggcgaatacgccatggcaaacggtgtttgct
gatccgcaattggctggtttgattcaggaaggcctggatcaaaatctggacttgaaaaat
gcggttcagaatattgtacagtcgaaagccactttgcagcaaagtaaagcagcctttttc
cctacgctaaccgctgatgtaaacgcatcaaggaataagcagtcacaagctggattgaac
tttcctccgggcatcaatatcaatacgctgaccaactctttcaaagcgcagctgagcacc
agctgggaagccgatatctggggtaaactgagcagcgcaaaaagagctgccttagcgact
tacttccaaacggatgctgcaaaaagagcggtacaaactcagctgattgctgatatagcg
accagttattataccttgctggcattagacagccagctggaaattacccagcagacctta
aaaagtaggattactggtgtagaaaccatgaaagctttgaaagaaggtgcagtagtaaat
ggtgcggcagtggttcaaagtgaggccagcagatatgcaacagaagtaacgattccagat
ttaaagagaaccatcagagagactgaaaacgcgttaaacatcctgttggcgagagctcca
gggccaattaaccgtggtaaactcctgaatcagaatccaaccagcgatttaaaaatcggt
gtccctactcaattactggaaaacagaccagatgtacaagctgcagaactttcttttaga
agtgcatttgagaacaccaatctggcccgtacttatttctatccttccttcaccattacg
gcgacaggtggtttgtcaagtctggatcttaaagacttcttcgacaagtctgtattttac
aacttgctgggtggattaacacagccaatcttcaacaaaggcttaaataaagccagattg
attacggcaaaatctgcacaggaacaagcagtaaacaacttccagaaaacactattggtg
gcagggaaagaagtatcagatgctttatatacttatcagacagcagtagaaaaagaagaa
gcgcgtgcaaaacaaattgctgccttgcaaaaatcggtagattatactcaggaattattg
agatttagctctgccacgaactatacagatgtactgacttcagagcaaagtttgcttgca
gcacaactgagtggtgtaaatgacaggttacaaaaactacaatctatagttaatttatac
agagcattaggtggaggctggaaataa
DBGET
integrated database retrieval system
