Pedobacter gandavensis: QG516_24500
Help
Entry
QG516_24500 CDS
T09013
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgj03016
]
QG516_24500 (mnmE)
Transfer RNA biogenesis [BR:
pgj03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
QG516_24500 (mnmE)
Prokaryotic type
Methyltransferases
QG516_24500 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Ras
Dynamin_N
GTP_EFTU
cobW
Arf
MMR_HSR1_Xtn
ABC_ATPase
ABC_tran
AAA_29
Roc
FtsK_SpoIIIE
AIG1
DegQ
Motif
Other DBs
NCBI-ProteinID:
WGQ09678
LinkDB
All DBs
Position
5800919..5802286
Genome browser
AA seq
455 aa
AA seq
DB search
MISNETIVALSTPQGIGAIGVIRLSGKDAITITNSVFSKDLLKQDSHTLHFGLIKDGDVV
IDEVVVALFVAPKSYTKENVVEISCHGSNYIIQQIISLLIRKGASAAKPGEFTLRAFLNG
SLDLSQAEAVADLISSDSQAAHSVAMNQLRGGFSTELNVLREQLIHFASMIELELDFSEE
DVEFANRDQLQELINKITLVINKLIRSFELGNVIKEGINTVIAGRPNAGKSTLLNALLNE
DRAIVSEIAGTTRDTIEEVLNINGINFRLIDTAGIREATDTIEAIGVEKTMQKISQSAVL
VYLFDVVNLSASEIRDDIQSLHKPGIAFIAVANKIDLSFTDRVKELGLPSDISFISISAK
ENQQIEELKQLLYDTAVGDKLSTNHTMVTNIRHVEALQKTKTALDSVVRGLTNPVTSDFL
AMDIKQALYYLGEITGQVTTDDLLENIFSKFCIGK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatcagtaatgaaactatagttgccttatctactcctcaaggaatcggtgcgatcggt
gtaattcgtctttcaggtaaggatgcgatcacgatcacgaactccgtttttagtaaggat
ttgctaaaacaagattcccataccttacactttggcttgatcaaagacggtgatgtggtg
attgatgaggtggtagtcgcactatttgtagctccaaagtcttatacaaaagaaaatgtg
gtggaaattagctgccatggttcaaattatatcattcagcagatcatttctttgttgatt
agaaaaggtgcttcggcagcgaaacctggagagtttactttaagggcgtttttgaatggt
tctttagacttatcgcaggcagaagctgtagcagatttgatttcttcggattctcaggct
gcacatagcgtggcgatgaaccagcttagaggtggttttagtacggaattgaatgtgtta
agagaacaattgatacattttgcttctatgattgaattggaacttgacttctctgaagag
gatgtggagtttgcaaatagagatcagctgcaggagttaatcaataagatcacattggtg
atcaataaactgatccgctcgtttgagttaggaaatgtgattaaagaagggatcaacacg
gttatcgccggtagaccaaatgcaggaaaatcaactttgttaaacgcgctgttaaatgaa
gaccgtgcgattgtaagtgaaattgccggaactacacgcgatacgattgaagaggttttg
aatattaatggcattaatttcagattgattgatactgcaggtattagagaggctacggac
acgattgaagcgattggagtagagaaaacaatgcagaagattagtcagtcggcagtattg
gtgtatctttttgatgtcgtgaatctttctgcaagcgaaatcagagatgatattcaaagt
ttacacaaaccaggaattgcttttatcgcagtggcgaataaaatcgatctttcatttaca
gatagagtgaaggaattaggattgccttcagatattagctttatctctatttcagcgaaa
gaaaatcagcagattgaggagttgaaacagttgctgtatgatactgcagtaggagataag
ctttctacgaaccatacaatggtgacgaatatcagacacgtggaagcgttgcagaaaacc
aaaacggcgctggatagtgtggtgagagggctaacaaatcctgtgacttcagatttctta
gcgatggatattaagcaagcgctttattatttaggtgagattactgggcaagtgactacg
gacgacttattggagaatatatttagtaagttctgtatcggcaaataa
DBGET
integrated database retrieval system
