Peptoniphilus genitalis: M9426_01540
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Entry
M9426_01540 CDS
T10321
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pgk Peptoniphilus genitalis
Pathway
pgk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M9426_01540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgk03019
]
M9426_01540
03009 Ribosome biogenesis [BR:
pgk03009
]
M9426_01540
Enzymes [BR:
pgk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M9426_01540
Messenger RNA biogenesis [BR:
pgk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M9426_01540
Ribosome biogenesis [BR:
pgk03009
]
Prokaryotic type
rRNA helicases
M9426_01540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
URN41713
UniProt:
A0ABY4TPG8
LinkDB
All DBs
Position
complement(313365..314999)
Genome browser
AA seq
544 aa
AA seq
DB search
MRFSDLNLSKEVLQAINDMGFESPSEVQEATIPLILEGRDVLAQAQTGTGKTASFGIPMI
EGIEDKSHNLQGLVLVPTRELARQVSDELKKLAKYKKFISIVPIYGGADMGKQLRDLKKG
ADIVVGTPGRVMDHMKRKTIVLDDLKFLTLDEADEMFDMGFRDDMKTIIEKTNPDRQTLF
FSATFDNDIKEFSKLYQVDPAKVIIEKKELTAEKIEQFYLELNRNMKTEILNRLILIHKP
KKSIIFCNTKRMVEALELEIAQRGYKVDSLHGDMRQSSRDNVMKKFRNGTIDVLIATDVA
ARGLDVSDIDLVFNYDLPQQAEYYVHRIGRTARAGKKGASFTFVTSRDFPKFKEIEKYAN
IKMEKMKLPTKSDVEKESLDNLFDKVNKNIIRAEDQENYTEVLNKLLAEGHSLYDISASL
LKMVKESTNKTKIKDLDRVDYGKSFEMSKGSDSSKRKSKDKGMKKIKGPKIFINKGKRDG
LDSRDIIRLLGKHTDLAPSDIGRINIMPNFSFVEIPKKMIKDAIRDIDGKSLKGKSIKAE
YSEK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
ttgagatttagtgatttaaatttatctaaggaagttttgcaggcaattaatgacatgggt
tttgaaagtccatctgaagtacaagaggcaactatacctcttattttggaaggccgtgac
gtccttgcccaagctcaaactggtactggcaagactgcttcttttgggataccaatgatc
gaagggatagaagataagagccataacttgcaagggcttgtccttgttccaacaagggag
cttgcaaggcaggtttctgatgagttgaaaaagttagccaagtataaaaagttcattagc
attgtgccaatttatggtggtgctgatatgggcaagcaactgcgtgacttaaagaagggc
gcagacattgtagttggaactcctggcagggtcatggaccacatgaagaggaagactatt
gtgcttgatgacttaaagttcttgactcttgacgaggctgacgagatgtttgacatgggc
tttagggatgacatgaagacgattatcgagaagaccaaccctgacaggcaaactttattt
ttctcagcaacttttgacaatgacataaaagaattttctaagctttatcaagtggatcct
gctaaggttattattgagaagaaggagctcactgctgagaagattgagcaattttatctt
gaactcaacagaaatatgaagacagaaattcttaacaggctcatcctaatccacaagcca
aagaagtctataatcttttgcaacactaagaggatggtggaggctctcgagcttgaaatt
gctcaaaggggttacaaggttgactcccttcatggagacatgcgtcagtcatcaagggat
aatgttatgaaaaagtttaggaatggaactattgatgttttaattgccactgatgttgca
gctcgtggccttgacgtttctgacattgacctcgtctttaactacgacctgccacaacaa
gctgagtactatgttcacagaattggacgtactgccagggccggcaagaagggtgcatct
tttacctttgtaacaagcagagacttcccaaagtttaaggaaatcgaaaagtatgcaaac
ataaagatggaaaagatgaagctgcctactaagtctgatgttgaaaaagaaagtcttgat
aatctctttgacaaggttaacaagaatataataagggctgaggaccaagagaactacaca
gaagttttaaacaagctcttggcggaaggccacagcctctacgacatttctgcatcactt
ctaaagatggtgaaggagtcaactaacaagacaaagatcaaggaccttgatagggtggac
tatggtaagagctttgaaatgtctaaggggtctgactcttctaagaggaagtccaaggac
aagggcatgaaaaaaattaagggaccaaagatttttatcaacaagggcaagagagacggt
cttgattctcgtgatattataaggctacttggaaagcacactgaccttgctcctagcgac
attggaaggatcaacattatgcctaactttagctttgtagagattccaaagaagatgatt
aaggatgccataagagatattgacggcaaaagtcttaagggtaagtctattaaggcagag
tattctgaaaaataa
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