Phaeobacter inhibens 2.10: PGA2_c09340
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Entry
PGA2_c09340 CDS
T02193
Symbol
uvrD
Name
(GenBank) DNA helicase II UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl03420
Nucleotide excision repair
pgl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PGA2_c09340 (uvrD)
03430 Mismatch repair
PGA2_c09340 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgl03400
]
PGA2_c09340 (uvrD)
Enzymes [BR:
pgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PGA2_c09340 (uvrD)
DNA repair and recombination proteins [BR:
pgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PGA2_c09340 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PGA2_c09340 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
AFO86943
UniProt:
A0AA85Z2M8
LinkDB
All DBs
Position
1026054..1028414
Genome browser
AA seq
786 aa
AA seq
DB search
MSSFDDIDPYEGISLSARAMAARPMPYLDGLNPAQRAAVECLEGPVLMLAGAGTGKTKAL
TARIVHLLTTGTAKPNEILAVTFTNKAAREMKERVAGMLGQAVEGMPWLGTFHSICVKLL
RRHAELVGLKSNFTILDTDDQIRLLKQLIKAEGIDDKRWPARMLAGVIDDWKNRALTPSK
VPVSDASAYNHRGVDFYAQYQARLKDLNAVDFGDLLLHMVTIFQDNPDVLEQYQRWFRFI
MVDEYQDTNVAQYLWLRLLAGAHKNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGATVV
RLEQNYRSTEHILSAASGVIRGNSGRLGKELWTESRGGEKVRLIGHWDGEEEARWIGEEI
EAMQRGTRGLAPIDLNNMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAM
AYFRQVISPDDDLAFERIVNTPKRGLGDKAQQTIQTMARSNGVSLVEGARLAVESGQIKG
KGGKALHQLVTDLARWGRLAGDADTTHMELAEIILDESGYTTMWQTDKNPDSPGRLENLK
ELVKALEAFENLQGFLEHVSLIMDNDKQDAAQKVSIMTLHAAKGLEFPAVFLPGWEDGLF
PSQRSMDESGLKGLEEERRLAYVGITRAEEICTISFAGNRRVFGQWQSQLPSRFIDELPE
ENVEVLTPPGLYGGGYGAAAPGGGGAVRSTIEDRMAAADGYNSPGWKRMQSRAGERGLSQ
PRESKSSVIDLTATSAFMVGERVFHQKFGYGAITGIEGDKLEVEFEKAGTKKVVARFVTA
AEDVPF
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttttgacgatatcgacccctatgaggggatctcgctgtccgcgcgcgccatg
gcagcgcggccgatgccgtatctcgacgggttgaacccggcgcagcgcgctgccgtggaa
tgtctggaaggtcccgtgctgatgctggccggggccggcaccggcaagaccaaggcgctg
accgcgcgcattgtgcatctgttgaccaccggcacggccaaaccgaacgagatcctcgcc
gtgaccttcaccaacaaggccgcgcgcgagatgaaagagcgtgtcgcgggcatgttgggg
caggcggtcgaggggatgccctggcttggcaccttccactcgatctgcgtgaaactgctg
cgccgccatgccgaactggtcgggctgaaatcaaacttcaccattctggataccgatgat
cagatccgcctgctgaagcagctgatcaaggccgaaggcatcgatgacaaacgctggccc
gcgcgcatgctggcgggcgtcattgacgattggaaaaaccgcgcgctgacgccctccaaa
gtgccggtctccgatgccagcgcctacaatcaccgcggcgtggatttctatgcccagtat
caggcccggctgaaggatctgaacgcggtcgatttcggtgatctcctgctgcatatggtc
accatctttcaggacaacccggatgtgctggaacaataccagcgctggttccggttcatc
atggtggacgaatatcaggataccaacgtggcccagtatctctggctgcggctcctcgcg
ggcgcgcacaagaacatctgctgcgtcggtgacgatgaccagtcgatctatggttggcgc
ggcgcagaggtgggcaatatcctgcggtttgaaaaggattttcccggcgccactgtggtc
cggctggaacagaactatcgctctaccgaacatattctcagtgccgcctctggcgtgatc
cgtggcaattccggccgtctgggcaaggaactctggaccgagtcgcgcggtggtgagaag
gtgcgcctgatcggtcattgggacggcgaggaggaggcccgctggatcggcgaagagatt
gaggcgatgcagcgcggcacccgtggtctggcacccatcgacctcaacaatatggcgatc
ctcgtgcgggcctcgcatcagatgcgcgcctttgaggaccggtttctgaccattggtctg
ccgtaccgggtcatcggcggcccgcgcttttatgaacggctcgaaattcgcgacgcgatg
gcttatttccgccaggtgatcagccccgacgatgatctcgcgtttgaacggatcgtgaac
acgcccaaacgtggtcttggcgataaggcgcaacagaccatccagaccatggcgcgcagc
aatggcgtctcattggttgaaggcgcacggcttgcggtggagagcggccagatcaagggt
aagggcggcaaagccctgcaccagctggtcaccgatctggcgcggtgggggcggctcgcc
ggagatgcagacaccacccatatggaactggctgagatcattctggatgaaagcggctat
accaccatgtggcagaccgacaaaaacccggattcgccgggccgtctggaaaacctcaag
gaattggtcaaggcactggaggcgtttgaaaacctgcaaggcttcctcgaacatgtcagc
ctgatcatggacaatgacaaacaggacgccgcccaaaaggtgtcgatcatgacattgcac
gccgccaaggggctggaatttcctgccgtcttcctgccggggtgggaggatggcctgttc
ccctcgcagcgatccatggacgaaagcggcctgaagggcctcgaagaggaacgccgtctg
gcctatgtcggcatcacacgggcggaagaaatctgcaccatctcctttgccggcaatcgc
cgcgtcttcgggcagtggcagtcacagctgccgtcgcggtttattgatgagctgccggaa
gagaatgtcgaggtgctgacaccgcccggtctttatggtggcggctacggggctgcggcc
cccggcggtggcggggcggtgcgctccacgattgaggatcgcatggcagctgccgacggc
tacaactctcccggctggaaacgcatgcagtcccgcgccggtgagcgtggtctgtcacag
cccagggaaagcaaatccagcgtcatcgacctcactgccacatccgccttcatggtcggg
gagcgtgtgtttcaccagaaatttggctatggcgcgatcaccggtatcgaaggcgacaag
ctggaggttgagttcgagaaggctggcacgaagaaagtcgtggcccgctttgtcaccgca
gcagaggacgtgcccttttaa
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