Paenibacillus glucanolyticus: A3958_25375
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Entry
A3958_25375 CDS
T09937
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pglu
Paenibacillus glucanolyticus
Pathway
pglu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pglu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3958_25375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pglu03019
]
A3958_25375
Messenger RNA biogenesis [BR:
pglu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A3958_25375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
KH_PNO1_2nd
HDOD
KH_NusA_2nd
KH_2
DUF4083
Motif
Other DBs
NCBI-ProteinID:
ANA83569
UniProt:
A0A163G0U7
LinkDB
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Position
complement(5677694..5679235)
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AA seq
513 aa
AA seq
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MDTWIWIIIVLAVAAIFFGFGYFIRKSLAEAKISSAEHAALQIVESAKKEAEALKKETVL
EAKDEVHKIRAEAEKDTRERRNEIQRQERRLLQKEESLDKKIESLERKEEQVANKEKRIE
ETQQQIDAIYKKQTTELERISNLTMEDARSIILSNVEQEVRHETAQMIKEIEQQAKEEAD
KKSREIITLAIQRCAADHVAETTVSVVTLPNEEMKGRIIGREGRNIRALETLTGIDLIID
DTPEAVILSGFDPIRREIARTALEKLVADGRIHPARIEEMVEKSRKEVDERIREYGEQAT
FEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAYLTGLMAGELGEDIVLAKRAGLL
HDIGKALDHEVEGSHVEIGVELAKKYKEHPVVINSIASHHGDCEATSVIAMLVGAADALS
AARPGARRETLETYIRRLEKLEEISESFEGVEKSYAIQAGREVRVMVQPEKIDDAEAFRL
ARDITKTIENELDYPGHIKVTVIRETRAVDYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
ctggatacatggatctggatcataatcgttctcgctgtagccgctatattctttgggttc
ggttattttattcgcaaatcccttgcagaagctaaaatttccagtgccgagcatgccgct
ttgcagatcgttgagagtgcgaagaaggaagcagaggcattgaagaaagaaacggttctt
gaagcaaaagatgaagttcataaaatcagagccgaagctgaaaaagacactcgtgagcgc
cgtaatgaaattcaacggcaggaacgcagattgttgcaaaaggaagagtcgctggataaa
aaaatagaatctttggaacgtaaagaagaacaagtggcgaacaaagagaaacgaatagaa
gagacccagcagcaaatcgacgctatttacaagaaacaaactacagaactggagcgtatc
tccaaccttacgatggaggatgcccgcagtatcattctcagcaatgtcgagcaagaggtt
cgtcatgaaaccgctcaaatgattaaagaaattgagcagcaggcgaaagaagaggctgac
aaaaaatcacgggagatcatcacgctggctatccaacgctgtgcggctgatcatgtggca
gagacaacggtttctgttgtcaccttgccgaacgaagaaatgaagggccggatcatcgga
cgtgaaggccggaatatccgtgcgcttgaaacccttacagggattgaccttattatcgat
gatactccggaagctgttattctctccgggtttgatccgattcgccgtgaaattgcccgt
acagctttggaaaagctcgtggcggacggacggattcatccggctcgtatcgaagaaatg
gtggagaaatcccgcaaggaagtggacgaacgcattcgcgagtatggagaacaagccaca
ttcgaagttggcgtgcacggtttgcatccagatttgatcaaaattctgggccgactgaag
ttccgtacaagctatggacaaaatgtgttgaaacattccatggaagtggcctacttgact
ggcctaatggccggcgaattgggcgaagacatcgtgcttgcgaaacgggcaggactgttg
catgacatcggtaaagcgctggatcatgaagtggaaggatcgcacgttgaaatcggcgtg
gagctggcgaagaaatacaaggaacatccggtggttatcaacagcattgcctctcaccac
ggtgattgtgaagcaacctcggttattgccatgctggttggcgcagctgacgcattgtcc
gcagccagaccgggagcccgcagagagacacttgagacgtatatccgacgccttgagaag
ctcgaagaaatttccgaatcctttgaaggcgttgagaaatcgtacgccattcaagcggga
cgtgaagttcgcgttatggtacagcctgagaagatcgatgatgccgaagcattccgcttg
gcacgcgacattaccaaaaccattgagaatgaactggattatccaggtcatatcaaagtc
accgttatccgggagacccgtgcggtggattacgcaaaatag
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